Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 EIF5-210ENST00000559249 704 ntTSL 225.21■■□□□ 1.635e-6■□□□□ 8.7
DROSHAQ9NRR4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.81■■□□□ 1.565e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-203ENST00000558265 872 ntTSL 521.48■■□□□ 1.035e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.025e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-204ENST00000558316 719 ntTSL 321.39■■□□□ 1.025e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-216ENST00000560877 521 ntTSL 421.02■□□□□ 0.965e-6■□□□□ 8.7
DROSHAQ9NRR4 TBC1D24-206ENST00000569874 3061 ntTSL 519.37■□□□□ 0.695e-6■□□□□ 8.7
DROSHAQ9NRR4 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.695e-6■□□□□ 8.7
DROSHAQ9NRR4 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC18.76■□□□□ 0.595e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.595e-6■□□□□ 8.7
DROSHAQ9NRR4 TBC1D24-203ENST00000564879 5324 ntTSL 218.47■□□□□ 0.555e-6■□□□□ 8.7
DROSHAQ9NRR4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.515e-6■□□□□ 8.7
DROSHAQ9NRR4 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.425e-6■□□□□ 8.7
DROSHAQ9NRR4 TBC1D24-208ENST00000630263 4180 ntTSL 517.68■□□□□ 0.425e-6■□□□□ 8.7
DROSHAQ9NRR4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.325e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.245e-6■□□□□ 8.7
DROSHAQ9NRR4 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.045e-6■□□□□ 8.7
DROSHAQ9NRR4 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.155e-6■□□□□ 8.7
DROSHAQ9NRR4 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.855e-6■□□□□ 8.7
DROSHAQ9NRR4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.255e-6■□□□□ 8.7
DROSHAQ9NRR4 CEBPZOS-207ENST00000470216 800 ntTSL 55.42□□□□□ -1.545e-6■□□□□ 8.7
DROSHAQ9NRR4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.83□□□□□ -1.85e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-213ENST00000560200 776 ntTSL 53.72□□□□□ -1.815e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-218ENST00000561325 569 ntTSL 43.48□□□□□ -1.855e-6■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-221ENST00000513230 248 ntTSL 334.88■■■■□ 3.171e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-238ENST00000521116 806 ntTSL 432.49■■■□□ 2.791e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-228ENST00000515714 690 ntTSL 429.04■■■□□ 2.241e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-212ENST00000505087 592 ntTSL 327.6■■■□□ 2.011e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-208ENST00000503664 569 ntTSL 425.54■■□□□ 1.681e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-225ENST00000515158 850 ntTSL 425.16■■□□□ 1.621e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-242ENST00000522256 492 ntTSL 423.65■■□□□ 1.381e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-226ENST00000515446 368 ntTSL 223.55■■□□□ 1.361e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-234ENST00000519707 582 ntTSL 220.59■□□□□ 0.891e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-233ENST00000519455 451 ntTSL 420.39■□□□□ 0.851e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-222ENST00000513972 761 ntTSL 219.57■□□□□ 0.721e-7■□□□□ 8.7
DROSHAQ9NRR4 HNRNPH1-219ENST00000512273 501 ntTSL 413.94□□□□□ -0.181e-7■□□□□ 8.7
DROSHAQ9NRR4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC38.05■■■■□ 3.689e-8■□□□□ 8.7
DROSHAQ9NRR4 CBFB-205ENST00000564034 509 ntTSL 235.93■■■■□ 3.349e-8■□□□□ 8.7
DROSHAQ9NRR4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.049e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-218ENST00000521865 628 ntTSL 232.71■■■□□ 2.839e-8■□□□□ 8.7
DROSHAQ9NRR4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.85■■■□□ 2.539e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-221ENST00000522720 593 ntTSL 425.13■■□□□ 1.619e-8■□□□□ 8.7
DROSHAQ9NRR4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.569e-8■□□□□ 8.7
DROSHAQ9NRR4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.349e-8■□□□□ 8.7
DROSHAQ9NRR4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.279e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-205ENST00000518196 631 ntTSL 319.77■□□□□ 0.769e-8■□□□□ 8.7
DROSHAQ9NRR4 SEC16A-209ENST00000472305 537 ntTSL 319.62■□□□□ 0.739e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC18.59■□□□□ 0.579e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.559e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC17.91■□□□□ 0.469e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-214ENST00000520142 754 ntTSL 317.17■□□□□ 0.349e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-203ENST00000517921 885 ntTSL 516.15■□□□□ 0.189e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-224ENST00000610907 1569 ntTSL 1 (best) BASIC15.39■□□□□ 0.059e-8■□□□□ 8.7
DROSHAQ9NRR4 PABPC1-222ENST00000523555 522 ntTSL 314.63□□□□□ -0.079e-8■□□□□ 8.7
DROSHAQ9NRR4 SEC16A-207ENST00000453963 4834 ntAPPRIS ALT2 TSL 1 (best)14.51□□□□□ -0.099e-8■□□□□ 8.7
DROSHAQ9NRR4 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.429e-8■□□□□ 8.7
DROSHAQ9NRR4 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.569e-8■□□□□ 8.7
DROSHAQ9NRR4 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.679e-8■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-209ENST00000486489 524 ntTSL 229.96■■■□□ 2.392e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-211ENST00000490746 589 ntTSL 526.93■■□□□ 1.92e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-208ENST00000485891 479 ntTSL 525.7■■□□□ 1.712e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC25.48■■□□□ 1.672e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-206ENST00000432649 569 ntAPPRIS ALT2 TSL 323.91■■□□□ 1.422e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC22.36■■□□□ 1.172e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.162e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.782e-6■□□□□ 8.7
DROSHAQ9NRR4 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC17.04■□□□□ 0.322e-6■□□□□ 8.7
DROSHAQ9NRR4 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC16.59■□□□□ 0.252e-6■□□□□ 8.7
DROSHAQ9NRR4 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.22e-6■□□□□ 8.7
DROSHAQ9NRR4 EVA1A-210ENST00000486696 585 ntTSL 310.74□□□□□ -0.692e-6■□□□□ 8.7
DROSHAQ9NRR4 CCNY-209ENST00000493157 816 ntTSL 526.33■■□□□ 1.83e-6■□□□□ 8.7
DROSHAQ9NRR4 CCNY-207ENST00000490012 793 ntTSL 324.97■■□□□ 1.593e-6■□□□□ 8.7
DROSHAQ9NRR4 NARF-225ENST00000584445 2484 ntTSL 217.21■□□□□ 0.355e-10■□□□□ 8.7
DROSHAQ9NRR4 NARF-226ENST00000584513 500 ntTSL 315.49■□□□□ 0.075e-10■□□□□ 8.7
DROSHAQ9NRR4 NARF-227ENST00000584965 300 ntTSL 314.61□□□□□ -0.075e-10■□□□□ 8.7
DROSHAQ9NRR4 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.113e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF4G2-203ENST00000524932 1286 ntTSL 532.19■■■□□ 2.749e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-210ENST00000527419 571 ntTSL 524.52■■□□□ 1.529e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-228ENST00000534246 523 ntTSL 224.38■■□□□ 1.499e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-216ENST00000530702 563 ntTSL 221.92■■□□□ 1.19e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-214ENST00000530211 591 ntTSL 217.51■□□□□ 0.399e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-219ENST00000531507 591 ntTSL 516.47■□□□□ 0.239e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-226ENST00000532570 573 ntTSL 515.91■□□□□ 0.149e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.449e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-206ENST00000525972 584 ntTSL 211.24□□□□□ -0.619e-7■□□□□ 8.6
DROSHAQ9NRR4 EIF4G2-212ENST00000528562 601 ntTSL 46.18□□□□□ -1.429e-7■□□□□ 8.6
DROSHAQ9NRR4 TJP1-210ENST00000558447 720 ntTSL 339.7■■■■□ 3.958e-9■□□□□ 8.6
DROSHAQ9NRR4 USP6NL-204ENST00000606752 1823 ntTSL 1 (best)32.52■■■□□ 2.88e-9■□□□□ 8.6
DROSHAQ9NRR4 HJURP-203ENST00000414924 1776 ntAPPRIS ALT2 TSL 428.84■■■□□ 2.218e-9■□□□□ 8.6
DROSHAQ9NRR4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC27.5■■□□□ 1.998e-9■□□□□ 8.6
DROSHAQ9NRR4 HJURP-208ENST00000453122 634 ntTSL 425.79■■□□□ 1.728e-9■□□□□ 8.6
DROSHAQ9NRR4 CTSC-202ENST00000393301 598 ntTSL 219.39■□□□□ 0.698e-9■□□□□ 8.6
DROSHAQ9NRR4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.618e-9■□□□□ 8.6
DROSHAQ9NRR4 HJURP-209ENST00000454020 806 ntTSL 518.8■□□□□ 0.68e-9■□□□□ 8.6
DROSHAQ9NRR4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.518e-9■□□□□ 8.6
DROSHAQ9NRR4 CTSC-209ENST00000534131 583 ntTSL 217.95■□□□□ 0.468e-9■□□□□ 8.6
DROSHAQ9NRR4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.468e-9■□□□□ 8.6
DROSHAQ9NRR4 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.378e-9■□□□□ 8.6
DROSHAQ9NRR4 CTSC-206ENST00000529974 747 ntTSL 1 (best) BASIC17.33■□□□□ 0.368e-9■□□□□ 8.6
DROSHAQ9NRR4 CTSC-207ENST00000533865 542 ntTSL 417.22■□□□□ 0.358e-9■□□□□ 8.6
Retrieved 100 of 16,331 protein–RNA pairs in 303.3 ms