RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 NISCHQ9Y2I1 1504 aa27.84■■■□□ 2.05
CTSC-209ENST00000534131 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
CTSC-209ENST00000534131 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
CTSC-209ENST00000534131 CCDC180Q9P1Z9 1646 aa24.7■■□□□ 1.54
CTSC-209ENST00000534131 ABCC9O60706 1549 aa23.96■■□□□ 1.43
CTSC-209ENST00000534131 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
CTSC-209ENST00000534131 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
CTSC-209ENST00000534131 NACADO15069 1562 aa23.11■■□□□ 1.29
CTSC-209ENST00000534131 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
CTSC-209ENST00000534131 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
CTSC-209ENST00000534131 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
CTSC-209ENST00000534131 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
CTSC-209ENST00000534131 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
CTSC-209ENST00000534131 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTSC-209ENST00000534131 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
CTSC-209ENST00000534131 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
CTSC-209ENST00000534131 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
CTSC-209ENST00000534131 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
CTSC-209ENST00000534131 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
CTSC-209ENST00000534131 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
CTSC-209ENST00000534131 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
CTSC-209ENST00000534131 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
CTSC-209ENST00000534131 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
CTSC-209ENST00000534131 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
CTSC-209ENST00000534131 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
CTSC-209ENST00000534131 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
CTSC-209ENST00000534131 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
CTSC-209ENST00000534131 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
CTSC-209ENST00000534131 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
CTSC-209ENST00000534131 WIZO95785 1651 aa21.28■■□□□ 1
CTSC-209ENST00000534131 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
CTSC-209ENST00000534131 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
CTSC-209ENST00000534131 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
CTSC-209ENST00000534131 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
CTSC-209ENST00000534131 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
CTSC-209ENST00000534131 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
CTSC-209ENST00000534131 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
CTSC-209ENST00000534131 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
CTSC-209ENST00000534131 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
CTSC-209ENST00000534131 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
CTSC-209ENST00000534131 NESP48681 1621 aa20.64■□□□□ 0.9
CTSC-209ENST00000534131 CFTRP13569 1480 aa20.6■□□□□ 0.89
CTSC-209ENST00000534131 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
CTSC-209ENST00000534131 CUX2O14529 1486 aa20.52■□□□□ 0.88
CTSC-209ENST00000534131 KIF21AQ7Z4S6 1674 aa20.5■□□□□ 0.87
CTSC-209ENST00000534131 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
CTSC-209ENST00000534131 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
CTSC-209ENST00000534131 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
CTSC-209ENST00000534131 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
CTSC-209ENST00000534131 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
CTSC-209ENST00000534131 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
CTSC-209ENST00000534131 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
CTSC-209ENST00000534131 WDR62O43379 1518 aa20.2■□□□□ 0.82
CTSC-209ENST00000534131 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
CTSC-209ENST00000534131 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
CTSC-209ENST00000534131 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
CTSC-209ENST00000534131 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
CTSC-209ENST00000534131 CUX1P39880 1505 aa20.1■□□□□ 0.81
CTSC-209ENST00000534131 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
CTSC-209ENST00000534131 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
CTSC-209ENST00000534131 FOXD1Q16676 465 aa20.07■□□□□ 0.8
CTSC-209ENST00000534131 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
CTSC-209ENST00000534131 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
CTSC-209ENST00000534131 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
CTSC-209ENST00000534131 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
CTSC-209ENST00000534131 SOGA1O94964 1423 aa19.94■□□□□ 0.78
CTSC-209ENST00000534131 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
CTSC-209ENST00000534131 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
CTSC-209ENST00000534131 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
CTSC-209ENST00000534131 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
CTSC-209ENST00000534131 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
CTSC-209ENST00000534131 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
CTSC-209ENST00000534131 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
CTSC-209ENST00000534131 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
CTSC-209ENST00000534131 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
CTSC-209ENST00000534131 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.755e-7■■■■■ 34.1
CTSC-209ENST00000534131 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
CTSC-209ENST00000534131 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
CTSC-209ENST00000534131 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
CTSC-209ENST00000534131 GRIN2BQ13224 1484 aa19.68■□□□□ 0.74
CTSC-209ENST00000534131 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
CTSC-209ENST00000534131 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
CTSC-209ENST00000534131 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
CTSC-209ENST00000534131 EEA1Q15075 1411 aa19.59■□□□□ 0.73
CTSC-209ENST00000534131 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
CTSC-209ENST00000534131 CUL7Q14999 1698 aa19.57■□□□□ 0.72
CTSC-209ENST00000534131 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
CTSC-209ENST00000534131 CHD1O14646 1710 aa19.54■□□□□ 0.72
CTSC-209ENST00000534131 FBLN2P98095 1184 aa19.52■□□□□ 0.72
CTSC-209ENST00000534131 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
CTSC-209ENST00000534131 IGF1RP08069 1367 aa19.52■□□□□ 0.72
CTSC-209ENST00000534131 SYNJ2O15056 1496 aa19.51■□□□□ 0.71
CTSC-209ENST00000534131 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
CTSC-209ENST00000534131 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
CTSC-209ENST00000534131 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
CTSC-209ENST00000534131 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
CTSC-209ENST00000534131 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
CTSC-209ENST00000534131 ADRA2BP18089 450 aa19.46■□□□□ 0.71
CTSC-209ENST00000534131 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
CTSC-209ENST00000534131 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms