RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
PABPC1-214ENST00000520142 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
PABPC1-214ENST00000520142 ABCC9O60706 1549 aa23.78■■□□□ 1.4
PABPC1-214ENST00000520142 RB1CC1Q8TDY2 1594 aa22.86■■□□□ 1.25
PABPC1-214ENST00000520142 NACADO15069 1562 aa22.85■■□□□ 1.25
PABPC1-214ENST00000520142 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
PABPC1-214ENST00000520142 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
PABPC1-214ENST00000520142 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
PABPC1-214ENST00000520142 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
PABPC1-214ENST00000520142 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
PABPC1-214ENST00000520142 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
PABPC1-214ENST00000520142 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
PABPC1-214ENST00000520142 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
PABPC1-214ENST00000520142 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
PABPC1-214ENST00000520142 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
PABPC1-214ENST00000520142 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
PABPC1-214ENST00000520142 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
PABPC1-214ENST00000520142 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
PABPC1-214ENST00000520142 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
PABPC1-214ENST00000520142 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
PABPC1-214ENST00000520142 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
PABPC1-214ENST00000520142 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
PABPC1-214ENST00000520142 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
PABPC1-214ENST00000520142 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
PABPC1-214ENST00000520142 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
PABPC1-214ENST00000520142 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
PABPC1-214ENST00000520142 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
PABPC1-214ENST00000520142 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
PABPC1-214ENST00000520142 WIZO95785 1651 aa20.79■□□□□ 0.92
PABPC1-214ENST00000520142 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
PABPC1-214ENST00000520142 NESP48681 1621 aa20.59■□□□□ 0.89
PABPC1-214ENST00000520142 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
PABPC1-214ENST00000520142 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
PABPC1-214ENST00000520142 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
PABPC1-214ENST00000520142 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
PABPC1-214ENST00000520142 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
PABPC1-214ENST00000520142 CFTRP13569 1480 aa20.37■□□□□ 0.85
PABPC1-214ENST00000520142 CCDC88BA6NC98 1476 aa20.34■□□□□ 0.85
PABPC1-214ENST00000520142 CUX2O14529 1486 aa20.33■□□□□ 0.85
PABPC1-214ENST00000520142 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
PABPC1-214ENST00000520142 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
PABPC1-214ENST00000520142 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
PABPC1-214ENST00000520142 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
PABPC1-214ENST00000520142 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
PABPC1-214ENST00000520142 WDR62O43379 1518 aa20.15■□□□□ 0.82
PABPC1-214ENST00000520142 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
PABPC1-214ENST00000520142 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
PABPC1-214ENST00000520142 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
PABPC1-214ENST00000520142 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
PABPC1-214ENST00000520142 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
PABPC1-214ENST00000520142 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
PABPC1-214ENST00000520142 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
PABPC1-214ENST00000520142 CUX1P39880 1505 aa19.74■□□□□ 0.75
PABPC1-214ENST00000520142 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
PABPC1-214ENST00000520142 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
PABPC1-214ENST00000520142 TARBP1Q13395 1621 aaKnown RBP19.71■□□□□ 0.75
PABPC1-214ENST00000520142 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
PABPC1-214ENST00000520142 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
PABPC1-214ENST00000520142 SOGA1O94964 1423 aa19.62■□□□□ 0.73
PABPC1-214ENST00000520142 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
PABPC1-214ENST00000520142 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.729e-6■■□□□ 13.1
PABPC1-214ENST00000520142 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
PABPC1-214ENST00000520142 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
PABPC1-214ENST00000520142 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
PABPC1-214ENST00000520142 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
PABPC1-214ENST00000520142 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
PABPC1-214ENST00000520142 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
PABPC1-214ENST00000520142 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
PABPC1-214ENST00000520142 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
PABPC1-214ENST00000520142 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
PABPC1-214ENST00000520142 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
PABPC1-214ENST00000520142 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
PABPC1-214ENST00000520142 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
PABPC1-214ENST00000520142 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
PABPC1-214ENST00000520142 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
PABPC1-214ENST00000520142 CHD1O14646 1710 aa19.35■□□□□ 0.69
PABPC1-214ENST00000520142 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
PABPC1-214ENST00000520142 SYNJ2O15056 1496 aa19.29■□□□□ 0.68
PABPC1-214ENST00000520142 FBLN2P98095 1184 aa19.25■□□□□ 0.67
PABPC1-214ENST00000520142 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
PABPC1-214ENST00000520142 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
PABPC1-214ENST00000520142 ADAMTS12P58397 1594 aa19.22■□□□□ 0.67
PABPC1-214ENST00000520142 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
PABPC1-214ENST00000520142 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
PABPC1-214ENST00000520142 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
PABPC1-214ENST00000520142 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
PABPC1-214ENST00000520142 RIMBP3CA6NJZ7 1639 aa19.16■□□□□ 0.66
PABPC1-214ENST00000520142 RIMBP3BA6NNM3 1639 aa19.16■□□□□ 0.66
PABPC1-214ENST00000520142 RIMBP3Q9UFD9 1639 aa19.16■□□□□ 0.66
PABPC1-214ENST00000520142 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
PABPC1-214ENST00000520142 IGF1RP08069 1367 aa19.13■□□□□ 0.65
PABPC1-214ENST00000520142 NUP160Q12769 1436 aa19.12■□□□□ 0.65
PABPC1-214ENST00000520142 CEP170Q5SW79 1584 aa19.08■□□□□ 0.65
PABPC1-214ENST00000520142 CUL7Q14999 1698 aa19.03■□□□□ 0.64
PABPC1-214ENST00000520142 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
PABPC1-214ENST00000520142 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
PABPC1-214ENST00000520142 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
PABPC1-214ENST00000520142 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
PABPC1-214ENST00000520142 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
PABPC1-214ENST00000520142 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms