RNA–Protein interactions for RNA: ENST00000584965.1

NARF-227, Transcript of nuclear prelamin A recognition factor, humanhuman

TSL 3

Gene NARF, Length 300 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NARF-227ENST00000584965 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
NARF-227ENST00000584965 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
NARF-227ENST00000584965 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
NARF-227ENST00000584965 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
NARF-227ENST00000584965 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
NARF-227ENST00000584965 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
NARF-227ENST00000584965 NACADO15069 1562 aa17.08■□□□□ 0.32
NARF-227ENST00000584965 ABCC9O60706 1549 aa17.02■□□□□ 0.32
NARF-227ENST00000584965 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
NARF-227ENST00000584965 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
NARF-227ENST00000584965 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
NARF-227ENST00000584965 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
NARF-227ENST00000584965 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
NARF-227ENST00000584965 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
NARF-227ENST00000584965 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
NARF-227ENST00000584965 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
NARF-227ENST00000584965 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
NARF-227ENST00000584965 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
NARF-227ENST00000584965 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
NARF-227ENST00000584965 WIZO95785 1651 aa16.29■□□□□ 0.2
NARF-227ENST00000584965 BICRAQ9NZM4 1560 aa16.28■□□□□ 0.2
NARF-227ENST00000584965 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
NARF-227ENST00000584965 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
NARF-227ENST00000584965 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
NARF-227ENST00000584965 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
NARF-227ENST00000584965 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
NARF-227ENST00000584965 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
NARF-227ENST00000584965 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
NARF-227ENST00000584965 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
NARF-227ENST00000584965 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
NARF-227ENST00000584965 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■■□□□ 11.9
NARF-227ENST00000584965 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
NARF-227ENST00000584965 EEA1Q15075 1411 aa15.75■□□□□ 0.11
NARF-227ENST00000584965 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
NARF-227ENST00000584965 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
NARF-227ENST00000584965 NCAPD3P42695 1498 aa15.71■□□□□ 0.1
NARF-227ENST00000584965 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
NARF-227ENST00000584965 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
NARF-227ENST00000584965 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
NARF-227ENST00000584965 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
NARF-227ENST00000584965 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
NARF-227ENST00000584965 KIF21BO75037 1637 aa15.54■□□□□ 0.08
NARF-227ENST00000584965 HRCP23327 699 aa15.54■□□□□ 0.08
NARF-227ENST00000584965 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
NARF-227ENST00000584965 SOGA1O94964 1423 aa15.5■□□□□ 0.07
NARF-227ENST00000584965 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
NARF-227ENST00000584965 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
NARF-227ENST00000584965 FAM9AQ8IZU1 332 aaPredicted RBP15.48■□□□□ 0.07
NARF-227ENST00000584965 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
NARF-227ENST00000584965 CFTRP13569 1480 aa15.47■□□□□ 0.07
NARF-227ENST00000584965 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.06
NARF-227ENST00000584965 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
NARF-227ENST00000584965 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
NARF-227ENST00000584965 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
NARF-227ENST00000584965 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
NARF-227ENST00000584965 CUX1P39880 1505 aa15.35■□□□□ 0.05
NARF-227ENST00000584965 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
NARF-227ENST00000584965 PRXQ9BXM0 1461 aa15.27■□□□□ 0.04
NARF-227ENST00000584965 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
NARF-227ENST00000584965 RAPGEF2Q9Y4G8 1499 aa15.21■□□□□ 0.03
NARF-227ENST00000584965 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
NARF-227ENST00000584965 ZEB1P37275 1124 aaPredicted RBP15.19■□□□□ 0.02
NARF-227ENST00000584965 CLIP1P30622 1438 aa15.17■□□□□ 0.02
NARF-227ENST00000584965 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
NARF-227ENST00000584965 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
NARF-227ENST00000584965 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
NARF-227ENST00000584965 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
NARF-227ENST00000584965 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
NARF-227ENST00000584965 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
NARF-227ENST00000584965 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
NARF-227ENST00000584965 WDR97A6NE52 1622 aa15.04■□□□□ -0
NARF-227ENST00000584965 ARAP1Q96P48 1450 aa15.04■□□□□ -0
NARF-227ENST00000584965 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
NARF-227ENST00000584965 CUX2O14529 1486 aa15.02■□□□□ -0
NARF-227ENST00000584965 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
NARF-227ENST00000584965 CUL7Q14999 1698 aa15□□□□□ -0.01
NARF-227ENST00000584965 IGF1RP08069 1367 aa14.98□□□□□ -0.01
NARF-227ENST00000584965 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
NARF-227ENST00000584965 MAP3K1Q13233 1512 aa14.96□□□□□ -0.02
NARF-227ENST00000584965 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
NARF-227ENST00000584965 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
NARF-227ENST00000584965 PPARGC1BQ86YN6 1023 aaKnown RBP14.92□□□□□ -0.02
NARF-227ENST00000584965 NESP48681 1621 aa14.92□□□□□ -0.02
NARF-227ENST00000584965 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
NARF-227ENST00000584965 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
NARF-227ENST00000584965 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
NARF-227ENST00000584965 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
NARF-227ENST00000584965 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
NARF-227ENST00000584965 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
NARF-227ENST00000584965 CFAP43Q8NDM7 1665 aa14.84□□□□□ -0.03
NARF-227ENST00000584965 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
NARF-227ENST00000584965 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
NARF-227ENST00000584965 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
NARF-227ENST00000584965 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
NARF-227ENST00000584965 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.042e-11■■■■□ 25.5
NARF-227ENST00000584965 APLP2Q06481 763 aa14.8□□□□□ -0.04
NARF-227ENST00000584965 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
NARF-227ENST00000584965 SAMD9Q5K651 1589 aa14.77□□□□□ -0.05
NARF-227ENST00000584965 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
NARF-227ENST00000584965 PCF11O94913 1555 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms