RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 NISCHQ9Y2I1 1504 aa31.2■■■□□ 2.59
CTSC-202ENST00000393301 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
CTSC-202ENST00000393301 ABCC9O60706 1549 aa27.74■■■□□ 2.03
CTSC-202ENST00000393301 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
CTSC-202ENST00000393301 NACADO15069 1562 aa26.48■■□□□ 1.83
CTSC-202ENST00000393301 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
CTSC-202ENST00000393301 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
CTSC-202ENST00000393301 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
CTSC-202ENST00000393301 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
CTSC-202ENST00000393301 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
CTSC-202ENST00000393301 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
CTSC-202ENST00000393301 BICRAQ9NZM4 1560 aa25.85■■□□□ 1.73
CTSC-202ENST00000393301 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
CTSC-202ENST00000393301 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
CTSC-202ENST00000393301 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
CTSC-202ENST00000393301 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
CTSC-202ENST00000393301 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
CTSC-202ENST00000393301 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
CTSC-202ENST00000393301 NCAPD3P42695 1498 aa24.43■■□□□ 1.5
CTSC-202ENST00000393301 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
CTSC-202ENST00000393301 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
CTSC-202ENST00000393301 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
CTSC-202ENST00000393301 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
CTSC-202ENST00000393301 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
CTSC-202ENST00000393301 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
CTSC-202ENST00000393301 CUX2O14529 1486 aa24.06■■□□□ 1.44
CTSC-202ENST00000393301 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
CTSC-202ENST00000393301 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
CTSC-202ENST00000393301 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
CTSC-202ENST00000393301 NESP48681 1621 aa23.88■■□□□ 1.41
CTSC-202ENST00000393301 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
CTSC-202ENST00000393301 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
CTSC-202ENST00000393301 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
CTSC-202ENST00000393301 WIZO95785 1651 aa23.68■■□□□ 1.38
CTSC-202ENST00000393301 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
CTSC-202ENST00000393301 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
CTSC-202ENST00000393301 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
CTSC-202ENST00000393301 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
CTSC-202ENST00000393301 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
CTSC-202ENST00000393301 WDR62O43379 1518 aa23.46■■□□□ 1.35
CTSC-202ENST00000393301 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
CTSC-202ENST00000393301 CFTRP13569 1480 aa23.42■■□□□ 1.34
CTSC-202ENST00000393301 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
CTSC-202ENST00000393301 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
CTSC-202ENST00000393301 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
CTSC-202ENST00000393301 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
CTSC-202ENST00000393301 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
CTSC-202ENST00000393301 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
CTSC-202ENST00000393301 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
CTSC-202ENST00000393301 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
CTSC-202ENST00000393301 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
CTSC-202ENST00000393301 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
CTSC-202ENST00000393301 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
CTSC-202ENST00000393301 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
CTSC-202ENST00000393301 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
CTSC-202ENST00000393301 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
CTSC-202ENST00000393301 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
CTSC-202ENST00000393301 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
CTSC-202ENST00000393301 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
CTSC-202ENST00000393301 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
CTSC-202ENST00000393301 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
CTSC-202ENST00000393301 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.25e-7■■■■■ 34.1
CTSC-202ENST00000393301 CHD1O14646 1710 aa22.55■■□□□ 1.2
CTSC-202ENST00000393301 CUX1P39880 1505 aa22.55■■□□□ 1.2
CTSC-202ENST00000393301 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
CTSC-202ENST00000393301 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
CTSC-202ENST00000393301 SOGA1O94964 1423 aa22.52■■□□□ 1.2
CTSC-202ENST00000393301 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
CTSC-202ENST00000393301 MAGI1Q96QZ7 1491 aaPredicted RBP22.43■■□□□ 1.18
CTSC-202ENST00000393301 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
CTSC-202ENST00000393301 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
CTSC-202ENST00000393301 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
CTSC-202ENST00000393301 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
CTSC-202ENST00000393301 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
CTSC-202ENST00000393301 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.17
CTSC-202ENST00000393301 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
CTSC-202ENST00000393301 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
CTSC-202ENST00000393301 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
CTSC-202ENST00000393301 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
CTSC-202ENST00000393301 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
CTSC-202ENST00000393301 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
CTSC-202ENST00000393301 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
CTSC-202ENST00000393301 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
CTSC-202ENST00000393301 FBLN2P98095 1184 aa22.25■■□□□ 1.15
CTSC-202ENST00000393301 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
CTSC-202ENST00000393301 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
CTSC-202ENST00000393301 CYB5RLQ6IPT4 315 aa22.18■■□□□ 1.14
CTSC-202ENST00000393301 ADAMTS12P58397 1594 aa22.13■■□□□ 1.13
CTSC-202ENST00000393301 GRIN2AQ12879 1464 aa22.1■■□□□ 1.13
CTSC-202ENST00000393301 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
CTSC-202ENST00000393301 NUP160Q12769 1436 aa22.08■■□□□ 1.13
CTSC-202ENST00000393301 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
CTSC-202ENST00000393301 CEP170Q5SW79 1584 aa22.02■■□□□ 1.12
CTSC-202ENST00000393301 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
CTSC-202ENST00000393301 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
CTSC-202ENST00000393301 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
CTSC-202ENST00000393301 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
CTSC-202ENST00000393301 CUL7Q14999 1698 aa21.78■■□□□ 1.08
CTSC-202ENST00000393301 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
CTSC-202ENST00000393301 IGF1RP08069 1367 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms