RNA–Protein interactions for RNA: ENST00000533865.5

CTSC-207, Transcript of cathepsin C, humanhuman

TSL 4

Gene CTSC, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-207ENST00000533865 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
CTSC-207ENST00000533865 ABCC9O60706 1549 aa25.17■■□□□ 1.62
CTSC-207ENST00000533865 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
CTSC-207ENST00000533865 DNAJC5BQ9UF47 199 aa24.29■■□□□ 1.48
CTSC-207ENST00000533865 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
CTSC-207ENST00000533865 NACADO15069 1562 aa23.37■■□□□ 1.33
CTSC-207ENST00000533865 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
CTSC-207ENST00000533865 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
CTSC-207ENST00000533865 BICRAQ9NZM4 1560 aa23.13■■□□□ 1.29
CTSC-207ENST00000533865 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
CTSC-207ENST00000533865 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
CTSC-207ENST00000533865 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
CTSC-207ENST00000533865 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
CTSC-207ENST00000533865 CECR2Q9BXF3 1484 aa22.75■■□□□ 1.23
CTSC-207ENST00000533865 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
CTSC-207ENST00000533865 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
CTSC-207ENST00000533865 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
CTSC-207ENST00000533865 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
CTSC-207ENST00000533865 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
CTSC-207ENST00000533865 CUX2O14529 1486 aa21.99■■□□□ 1.11
CTSC-207ENST00000533865 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
CTSC-207ENST00000533865 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
CTSC-207ENST00000533865 NESP48681 1621 aa21.47■■□□□ 1.03
CTSC-207ENST00000533865 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
CTSC-207ENST00000533865 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
CTSC-207ENST00000533865 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
CTSC-207ENST00000533865 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
CTSC-207ENST00000533865 SMARCA2P51531 1590 aa21.3■■□□□ 1
CTSC-207ENST00000533865 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
CTSC-207ENST00000533865 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
CTSC-207ENST00000533865 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
CTSC-207ENST00000533865 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
CTSC-207ENST00000533865 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
CTSC-207ENST00000533865 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
CTSC-207ENST00000533865 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
CTSC-207ENST00000533865 WDR62O43379 1518 aa20.96■□□□□ 0.95
CTSC-207ENST00000533865 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
CTSC-207ENST00000533865 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
CTSC-207ENST00000533865 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
CTSC-207ENST00000533865 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
CTSC-207ENST00000533865 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
CTSC-207ENST00000533865 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
CTSC-207ENST00000533865 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
CTSC-207ENST00000533865 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
CTSC-207ENST00000533865 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
CTSC-207ENST00000533865 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
CTSC-207ENST00000533865 WIZO95785 1651 aa20.55■□□□□ 0.88
CTSC-207ENST00000533865 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
CTSC-207ENST00000533865 CFTRP13569 1480 aa20.51■□□□□ 0.87
CTSC-207ENST00000533865 ZNF608Q9ULD9 1512 aaPredicted RBP20.4■□□□□ 0.86
CTSC-207ENST00000533865 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
CTSC-207ENST00000533865 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
CTSC-207ENST00000533865 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
CTSC-207ENST00000533865 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
CTSC-207ENST00000533865 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
CTSC-207ENST00000533865 CHD1O14646 1710 aa20.27■□□□□ 0.84
CTSC-207ENST00000533865 EIF4G3O43432 1585 aaKnown RBP20.26■□□□□ 0.83
CTSC-207ENST00000533865 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
CTSC-207ENST00000533865 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
CTSC-207ENST00000533865 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
CTSC-207ENST00000533865 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
CTSC-207ENST00000533865 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
CTSC-207ENST00000533865 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.815e-7■■■■■ 34.1
CTSC-207ENST00000533865 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
CTSC-207ENST00000533865 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
CTSC-207ENST00000533865 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
CTSC-207ENST00000533865 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
CTSC-207ENST00000533865 FBLN2P98095 1184 aa19.98■□□□□ 0.79
CTSC-207ENST00000533865 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
CTSC-207ENST00000533865 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
CTSC-207ENST00000533865 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
CTSC-207ENST00000533865 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
CTSC-207ENST00000533865 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
CTSC-207ENST00000533865 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
CTSC-207ENST00000533865 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
CTSC-207ENST00000533865 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
CTSC-207ENST00000533865 SOGA1O94964 1423 aa19.77■□□□□ 0.76
CTSC-207ENST00000533865 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
CTSC-207ENST00000533865 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
CTSC-207ENST00000533865 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
CTSC-207ENST00000533865 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
CTSC-207ENST00000533865 KIF13AQ9H1H9 1805 aa19.67■□□□□ 0.74
CTSC-207ENST00000533865 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
CTSC-207ENST00000533865 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
CTSC-207ENST00000533865 CUX1P39880 1505 aa19.61■□□□□ 0.73
CTSC-207ENST00000533865 ABCA5Q8WWZ7 1642 aa19.53■□□□□ 0.72
CTSC-207ENST00000533865 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
CTSC-207ENST00000533865 ILDR1Q86SU0 546 aaPredicted RBP19.51■□□□□ 0.71
CTSC-207ENST00000533865 SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
CTSC-207ENST00000533865 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
CTSC-207ENST00000533865 NUP160Q12769 1436 aa19.46■□□□□ 0.71
CTSC-207ENST00000533865 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
CTSC-207ENST00000533865 KDM4FA0A1W2PPD8 638 aa19.43■□□□□ 0.7
CTSC-207ENST00000533865 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
CTSC-207ENST00000533865 ABCC10Q5T3U5 1492 aa19.36■□□□□ 0.69
CTSC-207ENST00000533865 DIP2BQ9P265 1576 aa19.34■□□□□ 0.69
CTSC-207ENST00000533865 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
CTSC-207ENST00000533865 KDM6BO15054 1643 aa19.3■□□□□ 0.68
CTSC-207ENST00000533865 FAM69CQ0P6D2 419 aa19.29■□□□□ 0.68
CTSC-207ENST00000533865 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms