RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
SEC16A-209ENST00000472305 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.91
SEC16A-209ENST00000472305 ABCC9O60706 1549 aa26.26■■□□□ 1.79
SEC16A-209ENST00000472305 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
SEC16A-209ENST00000472305 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
SEC16A-209ENST00000472305 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
SEC16A-209ENST00000472305 NACADO15069 1562 aa25.31■■□□□ 1.64
SEC16A-209ENST00000472305 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
SEC16A-209ENST00000472305 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
SEC16A-209ENST00000472305 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
SEC16A-209ENST00000472305 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
SEC16A-209ENST00000472305 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
SEC16A-209ENST00000472305 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
SEC16A-209ENST00000472305 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
SEC16A-209ENST00000472305 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
SEC16A-209ENST00000472305 DNAJC5Q9H3Z4 198 aa23.95■■□□□ 1.42
SEC16A-209ENST00000472305 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
SEC16A-209ENST00000472305 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
SEC16A-209ENST00000472305 CC2D2AQ9P2K1 1620 aa23.72■■□□□ 1.39
SEC16A-209ENST00000472305 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
SEC16A-209ENST00000472305 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
SEC16A-209ENST00000472305 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
SEC16A-209ENST00000472305 RSF1Q96T23 1441 aaPredicted RBP23.51■■□□□ 1.35
SEC16A-209ENST00000472305 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
SEC16A-209ENST00000472305 NCAPD3P42695 1498 aa23.42■■□□□ 1.34
SEC16A-209ENST00000472305 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
SEC16A-209ENST00000472305 WIZO95785 1651 aa23.4■■□□□ 1.34
SEC16A-209ENST00000472305 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
SEC16A-209ENST00000472305 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
SEC16A-209ENST00000472305 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
SEC16A-209ENST00000472305 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
SEC16A-209ENST00000472305 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
SEC16A-209ENST00000472305 CUX2O14529 1486 aa23.05■■□□□ 1.28
SEC16A-209ENST00000472305 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
SEC16A-209ENST00000472305 NESP48681 1621 aa22.84■■□□□ 1.25
SEC16A-209ENST00000472305 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
SEC16A-209ENST00000472305 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
SEC16A-209ENST00000472305 CFTRP13569 1480 aa22.69■■□□□ 1.22
SEC16A-209ENST00000472305 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
SEC16A-209ENST00000472305 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
SEC16A-209ENST00000472305 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
SEC16A-209ENST00000472305 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
SEC16A-209ENST00000472305 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
SEC16A-209ENST00000472305 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
SEC16A-209ENST00000472305 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
SEC16A-209ENST00000472305 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
SEC16A-209ENST00000472305 THOC2Q8NI27 1593 aaKnown RBP22.32■■□□□ 1.16
SEC16A-209ENST00000472305 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
SEC16A-209ENST00000472305 WDR62O43379 1518 aa22.22■■□□□ 1.15
SEC16A-209ENST00000472305 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
SEC16A-209ENST00000472305 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
SEC16A-209ENST00000472305 CUX1P39880 1505 aa22.16■■□□□ 1.14
SEC16A-209ENST00000472305 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
SEC16A-209ENST00000472305 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
SEC16A-209ENST00000472305 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
SEC16A-209ENST00000472305 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
SEC16A-209ENST00000472305 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
SEC16A-209ENST00000472305 TOP2BQ02880 1626 aa22■■□□□ 1.11
SEC16A-209ENST00000472305 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
SEC16A-209ENST00000472305 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
SEC16A-209ENST00000472305 SOGA1O94964 1423 aa21.96■■□□□ 1.11
SEC16A-209ENST00000472305 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
SEC16A-209ENST00000472305 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
SEC16A-209ENST00000472305 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
SEC16A-209ENST00000472305 TARBP1Q13395 1621 aaKnown RBP21.89■■□□□ 1.09
SEC16A-209ENST00000472305 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
SEC16A-209ENST00000472305 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.083e-7■■■■■ 33.4
SEC16A-209ENST00000472305 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
SEC16A-209ENST00000472305 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
SEC16A-209ENST00000472305 WDR97A6NE52 1622 aa21.75■■□□□ 1.07
SEC16A-209ENST00000472305 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
SEC16A-209ENST00000472305 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
SEC16A-209ENST00000472305 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
SEC16A-209ENST00000472305 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
SEC16A-209ENST00000472305 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
SEC16A-209ENST00000472305 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
SEC16A-209ENST00000472305 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
SEC16A-209ENST00000472305 GRIN2BQ13224 1484 aa21.62■■□□□ 1.05
SEC16A-209ENST00000472305 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
SEC16A-209ENST00000472305 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
SEC16A-209ENST00000472305 IGF1RP08069 1367 aa21.57■■□□□ 1.04
SEC16A-209ENST00000472305 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
SEC16A-209ENST00000472305 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
SEC16A-209ENST00000472305 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
SEC16A-209ENST00000472305 FBLN2P98095 1184 aa21.5■■□□□ 1.03
SEC16A-209ENST00000472305 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
SEC16A-209ENST00000472305 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
SEC16A-209ENST00000472305 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
SEC16A-209ENST00000472305 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
SEC16A-209ENST00000472305 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
SEC16A-209ENST00000472305 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
SEC16A-209ENST00000472305 CARMIL1Q5VZK9 1371 aa21.42■■□□□ 1.02
SEC16A-209ENST00000472305 CSRNP3Q8WYN3 585 aa21.42■■□□□ 1.02
SEC16A-209ENST00000472305 EEA1Q15075 1411 aa21.38■■□□□ 1.01
SEC16A-209ENST00000472305 CHD1O14646 1710 aa21.37■■□□□ 1.01
SEC16A-209ENST00000472305 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
SEC16A-209ENST00000472305 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
SEC16A-209ENST00000472305 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
SEC16A-209ENST00000472305 CUL7Q14999 1698 aa21.33■■□□□ 1
SEC16A-209ENST00000472305 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms