Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 AC005052.1-201ENST00000625181 2492 ntBASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB1Q9H4B7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 AC104819.1-201ENST00000504587 486 ntBASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 AC087388.1-201ENST00000571370 1112 ntBASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB1Q9H4B7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TUBB1Q9H4B7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TUBB1Q9H4B7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TUBB1Q9H4B7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 AC099336.1-202ENST00000602961 463 ntBASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB1Q9H4B7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms