RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 NISCHQ9Y2I1 1504 aa45.95■■■■■ 4.95
PXMP4-201ENST00000217398 CCDC180Q9P1Z9 1646 aa41.22■■■■■ 4.19
PXMP4-201ENST00000217398 ABCC9O60706 1549 aa41.01■■■■■ 4.16
PXMP4-201ENST00000217398 RB1CC1Q8TDY2 1594 aa39.11■■■■□ 3.85
PXMP4-201ENST00000217398 NACADO15069 1562 aa38.9■■■■□ 3.82
PXMP4-201ENST00000217398 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
PXMP4-201ENST00000217398 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
PXMP4-201ENST00000217398 DNAJC5BQ9UF47 199 aa38.45■■■■□ 3.75
PXMP4-201ENST00000217398 UNC13AQ9UPW8 1703 aa38.37■■■■□ 3.73
PXMP4-201ENST00000217398 PABPN1Q86U42 306 aaKnown RBP eCLIP38.15■■■■□ 3.7
PXMP4-201ENST00000217398 ZCCHC6Q5VYS8 1495 aaKnown RBP38.12■■■■□ 3.69
PXMP4-201ENST00000217398 BICRAQ9NZM4 1560 aa38.09■■■■□ 3.69
PXMP4-201ENST00000217398 DCAF1Q9Y4B6 1507 aa38.01■■■■□ 3.67
PXMP4-201ENST00000217398 SHROOM4Q9ULL8 1493 aa37.51■■■■□ 3.59
PXMP4-201ENST00000217398 SCRIBQ14160 1630 aa37.48■■■■□ 3.59
PXMP4-201ENST00000217398 CC2D2AQ9P2K1 1620 aa37.11■■■■□ 3.53
PXMP4-201ENST00000217398 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
PXMP4-201ENST00000217398 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
PXMP4-201ENST00000217398 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
PXMP4-201ENST00000217398 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
PXMP4-201ENST00000217398 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
PXMP4-201ENST00000217398 SMARCA2P51531 1590 aa35.69■■■■□ 3.3
PXMP4-201ENST00000217398 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
PXMP4-201ENST00000217398 BAZ1AQ9NRL2 1556 aaPredicted RBP35.63■■■■□ 3.29
PXMP4-201ENST00000217398 PEG3Q9GZU2 1588 aa35.54■■■■□ 3.28
PXMP4-201ENST00000217398 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
PXMP4-201ENST00000217398 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
PXMP4-201ENST00000217398 CUX2O14529 1486 aa35.32■■■■□ 3.24
PXMP4-201ENST00000217398 ERCC6Q03468 1493 aa35.31■■■■□ 3.24
PXMP4-201ENST00000217398 NESP48681 1621 aa35.31■■■■□ 3.24
PXMP4-201ENST00000217398 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
PXMP4-201ENST00000217398 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
PXMP4-201ENST00000217398 WIZO95785 1651 aa34.99■■■■□ 3.19
PXMP4-201ENST00000217398 THOC2Q8NI27 1593 aaKnown RBP34.99■■■■□ 3.19
PXMP4-201ENST00000217398 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
PXMP4-201ENST00000217398 PDS5BQ9NTI5 1447 aa34.8■■■■□ 3.16
PXMP4-201ENST00000217398 CADPSQ9ULU8 1353 aa34.78■■■■□ 3.16
PXMP4-201ENST00000217398 RSF1Q96T23 1441 aaPredicted RBP34.7■■■■□ 3.15
PXMP4-201ENST00000217398 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
PXMP4-201ENST00000217398 MRC2Q9UBG0 1479 aa34.53■■■■□ 3.12
PXMP4-201ENST00000217398 WDR62O43379 1518 aa34.5■■■■□ 3.11
PXMP4-201ENST00000217398 CFTRP13569 1480 aa34.46■■■■□ 3.11
PXMP4-201ENST00000217398 CEP164Q9UPV0 1460 aa34.39■■■■□ 3.1
PXMP4-201ENST00000217398 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
PXMP4-201ENST00000217398 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
PXMP4-201ENST00000217398 URB2Q14146 1524 aaKnown RBP34.15■■■■□ 3.06
PXMP4-201ENST00000217398 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
PXMP4-201ENST00000217398 TOPBP1Q92547 1522 aa33.79■■■■□ 3
PXMP4-201ENST00000217398 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
PXMP4-201ENST00000217398 ZNF608Q9ULD9 1512 aaPredicted RBP33.7■■■□□ 2.99
PXMP4-201ENST00000217398 ABCC8Q09428 1581 aa33.67■■■□□ 2.98
PXMP4-201ENST00000217398 DNMBPQ6XZF7 1577 aa33.67■■■□□ 2.98
PXMP4-201ENST00000217398 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
PXMP4-201ENST00000217398 TARBP1Q13395 1621 aaKnown RBP33.53■■■□□ 2.96
PXMP4-201ENST00000217398 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
PXMP4-201ENST00000217398 EIF4G3O43432 1585 aaKnown RBP33.52■■■□□ 2.96
PXMP4-201ENST00000217398 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
PXMP4-201ENST00000217398 AQRO60306 1485 aaKnown RBP eCLIP33.37■■■□□ 2.93
PXMP4-201ENST00000217398 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
PXMP4-201ENST00000217398 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
PXMP4-201ENST00000217398 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
PXMP4-201ENST00000217398 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
PXMP4-201ENST00000217398 CHD1O14646 1710 aa33.27■■■□□ 2.92
PXMP4-201ENST00000217398 CUX1P39880 1505 aa33.26■■■□□ 2.91
PXMP4-201ENST00000217398 SOGA1O94964 1423 aa33.24■■■□□ 2.91
PXMP4-201ENST00000217398 FGD5Q6ZNL6 1462 aa33.24■■■□□ 2.91
PXMP4-201ENST00000217398 ARHGEF11O15085 1522 aa33.19■■■□□ 2.9
PXMP4-201ENST00000217398 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
PXMP4-201ENST00000217398 TDRD9Q8NDG6 1382 aaKnown RBP33.15■■■□□ 2.9
PXMP4-201ENST00000217398 SUPT5HO00267 1087 aaKnown RBP33.06■■■□□ 2.88
PXMP4-201ENST00000217398 SNAPC4Q5SXM2 1469 aa33.03■■■□□ 2.88
PXMP4-201ENST00000217398 FBLN2P98095 1184 aa32.97■■■□□ 2.87
PXMP4-201ENST00000217398 MAGI1Q96QZ7 1491 aaPredicted RBP32.96■■■□□ 2.87
PXMP4-201ENST00000217398 GRIN2BQ13224 1484 aa32.95■■■□□ 2.87
PXMP4-201ENST00000217398 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
PXMP4-201ENST00000217398 ARAP1Q96P48 1450 aa32.9■■■□□ 2.86
PXMP4-201ENST00000217398 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
PXMP4-201ENST00000217398 ABCA10Q8WWZ4 1543 aa32.89■■■□□ 2.86
PXMP4-201ENST00000217398 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
PXMP4-201ENST00000217398 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
PXMP4-201ENST00000217398 SYNJ2O15056 1496 aa32.84■■■□□ 2.85
PXMP4-201ENST00000217398 CYB5RLQ6IPT4 315 aa32.83■■■□□ 2.85
PXMP4-201ENST00000217398 SYNJ1O43426 1573 aa32.81■■■□□ 2.84
PXMP4-201ENST00000217398 CHMP7Q8WUX9 453 aaPredicted RBP32.79■■■□□ 2.84
PXMP4-201ENST00000217398 BIVM-ERCC5R4GMW8 1640 aa32.79■■■□□ 2.84
PXMP4-201ENST00000217398 TOP2BQ02880 1626 aa32.76■■■□□ 2.83
PXMP4-201ENST00000217398 WRNQ14191 1432 aaPredicted RBP eCLIP32.69■■■□□ 2.82
PXMP4-201ENST00000217398 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
PXMP4-201ENST00000217398 GRIN2AQ12879 1464 aa32.55■■■□□ 2.8
PXMP4-201ENST00000217398 NUP160Q12769 1436 aa32.48■■■□□ 2.79
PXMP4-201ENST00000217398 CEP170Q5SW79 1584 aa32.47■■■□□ 2.79
PXMP4-201ENST00000217398 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
PXMP4-201ENST00000217398 FHAD1B1AJZ9 1412 aa32.43■■■□□ 2.78
PXMP4-201ENST00000217398 ERCC6L2Q5T890 1561 aa32.41■■■□□ 2.78
PXMP4-201ENST00000217398 SHROOM2Q13796 1616 aa32.37■■■□□ 2.77
PXMP4-201ENST00000217398 TRHP20396 242 aaPredicted RBP32.35■■■□□ 2.77
PXMP4-201ENST00000217398 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
PXMP4-201ENST00000217398 PRG4Q92954 1404 aaPredicted RBP32.07■■■□□ 2.72
PXMP4-201ENST00000217398 IGF1RP08069 1367 aa32.07■■■□□ 2.72
PXMP4-201ENST00000217398 JPH4Q96JJ6 628 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms