RNA–Protein interactions for RNA: ENST00000407838.7

VSTM2A-204, Transcript of V-set and transmembrane domain containing 2A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene VSTM2A, Length 3,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-204ENST00000407838 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
VSTM2A-204ENST00000407838 HRCP23327 699 aa28.29■■■□□ 2.12
VSTM2A-204ENST00000407838 PELP1Q8IZL8 1130 aaKnown RBP28.05■■■□□ 2.08
VSTM2A-204ENST00000407838 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
VSTM2A-204ENST00000407838 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.04
VSTM2A-204ENST00000407838 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
VSTM2A-204ENST00000407838 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
VSTM2A-204ENST00000407838 SCAF1Q9H7N4 1312 aaKnown RBP27.1■■□□□ 1.93
VSTM2A-204ENST00000407838 MYT1Q01538 1121 aa27.08■■□□□ 1.93
VSTM2A-204ENST00000407838 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
VSTM2A-204ENST00000407838 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
VSTM2A-204ENST00000407838 TRIM26Q12899 539 aaPredicted RBP26.5■■□□□ 1.83
VSTM2A-204ENST00000407838 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
VSTM2A-204ENST00000407838 LOC105371045A0A1W2PR82 267 aa26.4■■□□□ 1.82
VSTM2A-204ENST00000407838 ACIN1Q9UKV3 1341 aaKnown RBP26.29■■□□□ 1.8
VSTM2A-204ENST00000407838 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
VSTM2A-204ENST00000407838 GTF3C3Q9Y5Q9 886 aa26.25■■□□□ 1.79
VSTM2A-204ENST00000407838 NEUROD1Q13562 356 aa26.25■■□□□ 1.79
VSTM2A-204ENST00000407838 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
VSTM2A-204ENST00000407838 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
VSTM2A-204ENST00000407838 DIEXFQ68CQ4 756 aaKnown RBP25.69■■□□□ 1.7
VSTM2A-204ENST00000407838 YTHDC1Q96MU7 727 aaKnown RBP25.63■■□□□ 1.69
VSTM2A-204ENST00000407838 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
VSTM2A-204ENST00000407838 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
VSTM2A-204ENST00000407838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.54■■□□□ 1.68
VSTM2A-204ENST00000407838 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
VSTM2A-204ENST00000407838 BCL11AQ9H165 835 aa25.42■■□□□ 1.66
VSTM2A-204ENST00000407838 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
VSTM2A-204ENST00000407838 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.66
VSTM2A-204ENST00000407838 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
VSTM2A-204ENST00000407838 ANP32EQ9BTT0 268 aa25.07■■□□□ 1.6
VSTM2A-204ENST00000407838 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
VSTM2A-204ENST00000407838 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
VSTM2A-204ENST00000407838 MIER1Q8N108 512 aa24.95■■□□□ 1.58
VSTM2A-204ENST00000407838 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
VSTM2A-204ENST00000407838 TSHZ2Q9NRE2 1034 aa24.74■■□□□ 1.55
VSTM2A-204ENST00000407838 SUPT16HQ9Y5B9 1047 aaKnown RBP24.72■■□□□ 1.55
VSTM2A-204ENST00000407838 PRKCSHP14314 528 aaPredicted RBP24.68■■□□□ 1.54
VSTM2A-204ENST00000407838 BCANQ96GW7 911 aa24.5■■□□□ 1.51
VSTM2A-204ENST00000407838 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
VSTM2A-204ENST00000407838 HNRNPUL2Q1KMD3 747 aaKnown RBP24.28■■□□□ 1.48
VSTM2A-204ENST00000407838 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
VSTM2A-204ENST00000407838 RBM19Q9Y4C8 960 aaKnown RBP24.18■■□□□ 1.46
VSTM2A-204ENST00000407838 FKBP8Q14318 412 aa24.16■■□□□ 1.46
VSTM2A-204ENST00000407838 ITGAEP38570 1179 aa24.04■■□□□ 1.44
VSTM2A-204ENST00000407838 NEFLP07196 543 aa24.01■■□□□ 1.43
VSTM2A-204ENST00000407838 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
VSTM2A-204ENST00000407838 MSH5O43196 834 aa23.92■■□□□ 1.42
VSTM2A-204ENST00000407838 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
VSTM2A-204ENST00000407838 KCNH8Q96L42 1107 aa23.9■■□□□ 1.42
VSTM2A-204ENST00000407838 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.42
VSTM2A-204ENST00000407838 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
VSTM2A-204ENST00000407838 CEP162Q5TB80 1403 aa23.81■■□□□ 1.4
VSTM2A-204ENST00000407838 DEKP35659 375 aaKnown RBP23.8■■□□□ 1.4
VSTM2A-204ENST00000407838 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
VSTM2A-204ENST00000407838 ABCC9O60706 1549 aa23.78■■□□□ 1.4
VSTM2A-204ENST00000407838 APLP2Q06481 763 aa23.66■■□□□ 1.38
VSTM2A-204ENST00000407838 TRIM52Q96A61 297 aa23.66■■□□□ 1.38
VSTM2A-204ENST00000407838 CDK11AQ9UQ88 783 aaPredicted RBP23.64■■□□□ 1.38
VSTM2A-204ENST00000407838 MYT1LQ9UL68 1186 aa23.62■■□□□ 1.37
VSTM2A-204ENST00000407838 NBR1Q14596 966 aa23.62■■□□□ 1.37
VSTM2A-204ENST00000407838 CCDC136Q96JN2 1154 aa23.61■■□□□ 1.37
VSTM2A-204ENST00000407838 SALL2Q9Y467 1007 aaPredicted RBP23.58■■□□□ 1.37
VSTM2A-204ENST00000407838 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
VSTM2A-204ENST00000407838 RANGAP1P46060 587 aaPredicted RBP23.55■■□□□ 1.36
VSTM2A-204ENST00000407838 IRX6P78412 446 aaPredicted RBP23.53■■□□□ 1.36
VSTM2A-204ENST00000407838 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
VSTM2A-204ENST00000407838 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
VSTM2A-204ENST00000407838 RTN4Q9NQC3 1192 aaKnown RBP23.46■■□□□ 1.35
VSTM2A-204ENST00000407838 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.42■■□□□ 1.34
VSTM2A-204ENST00000407838 DHX57Q6P158 1386 aaKnown RBP23.37■■□□□ 1.33
VSTM2A-204ENST00000407838 SOGA1O94964 1423 aa23.36■■□□□ 1.33
VSTM2A-204ENST00000407838 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
VSTM2A-204ENST00000407838 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
VSTM2A-204ENST00000407838 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
VSTM2A-204ENST00000407838 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
VSTM2A-204ENST00000407838 ERICH6BQ5W0A0 696 aa23.28■■□□□ 1.32
VSTM2A-204ENST00000407838 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
VSTM2A-204ENST00000407838 IL27Q8NEV9 243 aa23.28■■□□□ 1.32
VSTM2A-204ENST00000407838 ANP32CO43423 234 aa23.27■■□□□ 1.32
VSTM2A-204ENST00000407838 HIRIP3Q9BW71 556 aaPredicted RBP23.27■■□□□ 1.32
VSTM2A-204ENST00000407838 PAK3O75914 559 aaPredicted RBP23.19■■□□□ 1.3
VSTM2A-204ENST00000407838 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
VSTM2A-204ENST00000407838 EIF5BO60841 1220 aaKnown RBP23.17■■□□□ 1.3
VSTM2A-204ENST00000407838 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
VSTM2A-204ENST00000407838 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
VSTM2A-204ENST00000407838 GOLGA3Q08378 1498 aa23.14■■□□□ 1.29
VSTM2A-204ENST00000407838 CLIP1P30622 1438 aa23.13■■□□□ 1.29
VSTM2A-204ENST00000407838 UBE2Q2Q8WVN8 375 aa23.12■■□□□ 1.29
VSTM2A-204ENST00000407838 B4GALNT3Q6L9W6 998 aa23.11■■□□□ 1.29
VSTM2A-204ENST00000407838 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
VSTM2A-204ENST00000407838 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
VSTM2A-204ENST00000407838 PPP4R2Q9NY27 417 aa23.06■■□□□ 1.28
VSTM2A-204ENST00000407838 ANP32AP39687 249 aaKnown RBP23.03■■□□□ 1.28
VSTM2A-204ENST00000407838 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
VSTM2A-204ENST00000407838 ZBTB47Q9UFB7 747 aaPredicted RBP23.02■■□□□ 1.28
VSTM2A-204ENST00000407838 WIZO95785 1651 aa23.02■■□□□ 1.28
VSTM2A-204ENST00000407838 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
VSTM2A-204ENST00000407838 EEA1Q15075 1411 aa22.99■■□□□ 1.27
VSTM2A-204ENST00000407838 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms