RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
SBSPON-201ENST00000297354 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
SBSPON-201ENST00000297354 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
SBSPON-201ENST00000297354 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
SBSPON-201ENST00000297354 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
SBSPON-201ENST00000297354 HRCP23327 699 aa27.67■■■□□ 2.02
SBSPON-201ENST00000297354 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
SBSPON-201ENST00000297354 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
SBSPON-201ENST00000297354 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.91
SBSPON-201ENST00000297354 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
SBSPON-201ENST00000297354 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
SBSPON-201ENST00000297354 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
SBSPON-201ENST00000297354 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
SBSPON-201ENST00000297354 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
SBSPON-201ENST00000297354 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
SBSPON-201ENST00000297354 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
SBSPON-201ENST00000297354 ZEB1P37275 1124 aaPredicted RBP26.12■■□□□ 1.77
SBSPON-201ENST00000297354 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
SBSPON-201ENST00000297354 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
SBSPON-201ENST00000297354 CENPBP07199 599 aaPredicted RBP25.97■■□□□ 1.75
SBSPON-201ENST00000297354 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.74
SBSPON-201ENST00000297354 MYT1Q01538 1121 aa25.9■■□□□ 1.74
SBSPON-201ENST00000297354 NEUROD1Q13562 356 aa25.83■■□□□ 1.72
SBSPON-201ENST00000297354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.81■■□□□ 1.72
SBSPON-201ENST00000297354 ACIN1Q9UKV3 1341 aaKnown RBP25.77■■□□□ 1.72
SBSPON-201ENST00000297354 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
SBSPON-201ENST00000297354 DIEXFQ68CQ4 756 aaKnown RBP25.61■■□□□ 1.69
SBSPON-201ENST00000297354 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
SBSPON-201ENST00000297354 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SBSPON-201ENST00000297354 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
SBSPON-201ENST00000297354 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
SBSPON-201ENST00000297354 BCANQ96GW7 911 aa24.88■■□□□ 1.57
SBSPON-201ENST00000297354 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
SBSPON-201ENST00000297354 MIER1Q8N108 512 aa24.82■■□□□ 1.56
SBSPON-201ENST00000297354 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
SBSPON-201ENST00000297354 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
SBSPON-201ENST00000297354 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
SBSPON-201ENST00000297354 APLP2Q06481 763 aa24.55■■□□□ 1.52
SBSPON-201ENST00000297354 ERICH6Q7L0X2 663 aa24.54■■□□□ 1.52
SBSPON-201ENST00000297354 ANP32EQ9BTT0 268 aa24.38■■□□□ 1.49
SBSPON-201ENST00000297354 NEFLP07196 543 aa24.36■■□□□ 1.49
SBSPON-201ENST00000297354 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
SBSPON-201ENST00000297354 ITGAEP38570 1179 aa24.3■■□□□ 1.48
SBSPON-201ENST00000297354 SUPT16HQ9Y5B9 1047 aaKnown RBP24.3■■□□□ 1.48
SBSPON-201ENST00000297354 FKBP8Q14318 412 aa24.22■■□□□ 1.47
SBSPON-201ENST00000297354 TSHZ2Q9NRE2 1034 aa24.16■■□□□ 1.46
SBSPON-201ENST00000297354 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
SBSPON-201ENST00000297354 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.42
SBSPON-201ENST00000297354 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
SBSPON-201ENST00000297354 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
SBSPON-201ENST00000297354 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
SBSPON-201ENST00000297354 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
SBSPON-201ENST00000297354 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
SBSPON-201ENST00000297354 RBM19Q9Y4C8 960 aaKnown RBP23.79■■□□□ 1.4
SBSPON-201ENST00000297354 ATP1B4Q9UN42 357 aaPredicted RBP23.76■■□□□ 1.39
SBSPON-201ENST00000297354 NBR1Q14596 966 aa23.75■■□□□ 1.39
SBSPON-201ENST00000297354 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
SBSPON-201ENST00000297354 CEP162Q5TB80 1403 aa23.7■■□□□ 1.38
SBSPON-201ENST00000297354 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
SBSPON-201ENST00000297354 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.37
SBSPON-201ENST00000297354 SCRIBQ14160 1630 aa23.64■■□□□ 1.37
SBSPON-201ENST00000297354 ABCC9O60706 1549 aa23.62■■□□□ 1.37
SBSPON-201ENST00000297354 ANP32CO43423 234 aa23.54■■□□□ 1.36
SBSPON-201ENST00000297354 RTN4Q9NQC3 1192 aaKnown RBP23.52■■□□□ 1.36
SBSPON-201ENST00000297354 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
SBSPON-201ENST00000297354 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
SBSPON-201ENST00000297354 DEKP35659 375 aaKnown RBP23.42■■□□□ 1.34
SBSPON-201ENST00000297354 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
SBSPON-201ENST00000297354 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
SBSPON-201ENST00000297354 SOGA1O94964 1423 aa23.4■■□□□ 1.34
SBSPON-201ENST00000297354 PRKCSHP14314 528 aaPredicted RBP23.39■■□□□ 1.33
SBSPON-201ENST00000297354 POLR3GLQ9BT43 218 aa23.36■■□□□ 1.33
SBSPON-201ENST00000297354 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
SBSPON-201ENST00000297354 CCDC136Q96JN2 1154 aa23.32■■□□□ 1.32
SBSPON-201ENST00000297354 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
SBSPON-201ENST00000297354 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
SBSPON-201ENST00000297354 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
SBSPON-201ENST00000297354 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
SBSPON-201ENST00000297354 MSH5O43196 834 aa23.27■■□□□ 1.32
SBSPON-201ENST00000297354 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
SBSPON-201ENST00000297354 B4GALNT3Q6L9W6 998 aa23.23■■□□□ 1.31
SBSPON-201ENST00000297354 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
SBSPON-201ENST00000297354 ANO8Q9HCE9 1232 aaPredicted RBP23.23■■□□□ 1.31
SBSPON-201ENST00000297354 CLIP1P30622 1438 aa23.22■■□□□ 1.31
SBSPON-201ENST00000297354 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
SBSPON-201ENST00000297354 ABCC8Q09428 1581 aa23.2■■□□□ 1.31
SBSPON-201ENST00000297354 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
SBSPON-201ENST00000297354 ANP32AP39687 249 aaKnown RBP23.1■■□□□ 1.29
SBSPON-201ENST00000297354 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
SBSPON-201ENST00000297354 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
SBSPON-201ENST00000297354 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
SBSPON-201ENST00000297354 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
SBSPON-201ENST00000297354 NOP58Q9Y2X3 529 aaKnown RBP23.03■■□□□ 1.28
SBSPON-201ENST00000297354 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
SBSPON-201ENST00000297354 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
SBSPON-201ENST00000297354 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
SBSPON-201ENST00000297354 LAS1LQ9Y4W2 734 aaKnown RBP23■■□□□ 1.27
SBSPON-201ENST00000297354 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
SBSPON-201ENST00000297354 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
SBSPON-201ENST00000297354 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms