RNA–Protein interactions for RNA: ENST00000396689.2

SPEG-204, Transcript of SPEG complex locus, humanhuman

TSL 1 (best) BASIC

Gene SPEG, Length 1,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-204ENST00000396689 NISCHQ9Y2I1 1504 aa45.11■■■■■ 4.81
SPEG-204ENST00000396689 CCDC180Q9P1Z9 1646 aa40.49■■■■■ 4.07
SPEG-204ENST00000396689 ABCC9O60706 1549 aa40.09■■■■■ 4.01
SPEG-204ENST00000396689 RB1CC1Q8TDY2 1594 aa38.39■■■■□ 3.74
SPEG-204ENST00000396689 NACADO15069 1562 aa38.22■■■■□ 3.71
SPEG-204ENST00000396689 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
SPEG-204ENST00000396689 DCAF8L2P0C7V8 631 aa37.79■■■■□ 3.64
SPEG-204ENST00000396689 DNAJC5BQ9UF47 199 aa37.79■■■■□ 3.64
SPEG-204ENST00000396689 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
SPEG-204ENST00000396689 ZCCHC6Q5VYS8 1495 aaKnown RBP37.44■■■■□ 3.58
SPEG-204ENST00000396689 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
SPEG-204ENST00000396689 PABPN1Q86U42 306 aaKnown RBP eCLIP37.31■■■■□ 3.56
SPEG-204ENST00000396689 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
SPEG-204ENST00000396689 SHROOM4Q9ULL8 1493 aa36.94■■■■□ 3.5
SPEG-204ENST00000396689 SCRIBQ14160 1630 aa36.69■■■■□ 3.46
SPEG-204ENST00000396689 CC2D2AQ9P2K1 1620 aa36.27■■■■□ 3.4
SPEG-204ENST00000396689 EIF4G1Q04637 1599 aaKnown RBP36.26■■■■□ 3.39
SPEG-204ENST00000396689 CECR2Q9BXF3 1484 aa36.17■■■■□ 3.38
SPEG-204ENST00000396689 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
SPEG-204ENST00000396689 SMARCA4P51532 1647 aa35.13■■■■□ 3.21
SPEG-204ENST00000396689 ATAD2BQ9ULI0 1458 aa35.1■■■■□ 3.21
SPEG-204ENST00000396689 SMARCA2P51531 1590 aa35.1■■■■□ 3.21
SPEG-204ENST00000396689 BAZ1AQ9NRL2 1556 aaPredicted RBP35.05■■■■□ 3.2
SPEG-204ENST00000396689 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
SPEG-204ENST00000396689 PEG3Q9GZU2 1588 aa34.89■■■■□ 3.18
SPEG-204ENST00000396689 BAZ1BQ9UIG0 1483 aaKnown RBP34.78■■■■□ 3.16
SPEG-204ENST00000396689 DNAJC5Q9H3Z4 198 aa34.73■■■■□ 3.15
SPEG-204ENST00000396689 MROH2BQ7Z745 1585 aa34.67■■■■□ 3.14
SPEG-204ENST00000396689 CUX2O14529 1486 aa34.65■■■■□ 3.14
SPEG-204ENST00000396689 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
SPEG-204ENST00000396689 NESP48681 1621 aa34.47■■■■□ 3.11
SPEG-204ENST00000396689 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
SPEG-204ENST00000396689 WIZO95785 1651 aa34.28■■■■□ 3.08
SPEG-204ENST00000396689 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
SPEG-204ENST00000396689 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
SPEG-204ENST00000396689 CADPSQ9ULU8 1353 aa34.15■■■■□ 3.06
SPEG-204ENST00000396689 KIF21AQ7Z4S6 1674 aa34.08■■■■□ 3.05
SPEG-204ENST00000396689 RSF1Q96T23 1441 aaPredicted RBP34.07■■■■□ 3.04
SPEG-204ENST00000396689 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
SPEG-204ENST00000396689 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
SPEG-204ENST00000396689 CFTRP13569 1480 aa33.82■■■■□ 3
SPEG-204ENST00000396689 WDR62O43379 1518 aa33.79■■■■□ 3
SPEG-204ENST00000396689 CEP164Q9UPV0 1460 aa33.76■■■□□ 2.99
SPEG-204ENST00000396689 FANCD2Q9BXW9 1451 aa33.72■■■□□ 2.99
SPEG-204ENST00000396689 PRDM2Q13029 1718 aa33.58■■■□□ 2.97
SPEG-204ENST00000396689 CCDC88BA6NC98 1476 aa33.49■■■□□ 2.95
SPEG-204ENST00000396689 URB2Q14146 1524 aaKnown RBP33.39■■■□□ 2.94
SPEG-204ENST00000396689 ABCC8Q09428 1581 aa33.21■■■□□ 2.91
SPEG-204ENST00000396689 IFT140Q96RY7 1462 aa33.12■■■□□ 2.89
SPEG-204ENST00000396689 TOPBP1Q92547 1522 aa33.11■■■□□ 2.89
SPEG-204ENST00000396689 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
SPEG-204ENST00000396689 OSCARQ8IYS5 282 aa33.03■■■□□ 2.88
SPEG-204ENST00000396689 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
SPEG-204ENST00000396689 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
SPEG-204ENST00000396689 TARBP1Q13395 1621 aaKnown RBP32.81■■■□□ 2.84
SPEG-204ENST00000396689 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
SPEG-204ENST00000396689 POLA1P09884 1462 aaPredicted RBP32.78■■■□□ 2.84
SPEG-204ENST00000396689 SUPT5HO00267 1087 aaKnown RBP32.71■■■□□ 2.83
SPEG-204ENST00000396689 WDR97A6NE52 1622 aa32.67■■■□□ 2.82
SPEG-204ENST00000396689 AQRO60306 1485 aaKnown RBP eCLIP32.63■■■□□ 2.81
SPEG-204ENST00000396689 SOGA1O94964 1423 aa32.63■■■□□ 2.81
SPEG-204ENST00000396689 RIMBP3CA6NJZ7 1639 aa32.6■■■□□ 2.81
SPEG-204ENST00000396689 RIMBP3BA6NNM3 1639 aa32.6■■■□□ 2.81
SPEG-204ENST00000396689 RIMBP3Q9UFD9 1639 aa32.6■■■□□ 2.81
SPEG-204ENST00000396689 FGD5Q6ZNL6 1462 aa32.58■■■□□ 2.81
SPEG-204ENST00000396689 CUX1P39880 1505 aa32.57■■■□□ 2.8
SPEG-204ENST00000396689 RAD54L2Q9Y4B4 1467 aa32.56■■■□□ 2.8
SPEG-204ENST00000396689 CHD1O14646 1710 aa32.51■■■□□ 2.8
SPEG-204ENST00000396689 ARHGEF11O15085 1522 aa32.51■■■□□ 2.79
SPEG-204ENST00000396689 TDRD9Q8NDG6 1382 aaKnown RBP32.46■■■□□ 2.79
SPEG-204ENST00000396689 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
SPEG-204ENST00000396689 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
SPEG-204ENST00000396689 SNAPC4Q5SXM2 1469 aa32.34■■■□□ 2.77
SPEG-204ENST00000396689 FBLN2P98095 1184 aa32.33■■■□□ 2.77
SPEG-204ENST00000396689 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
SPEG-204ENST00000396689 GAPVD1Q14C86 1478 aa32.26■■■□□ 2.75
SPEG-204ENST00000396689 SYNJ2O15056 1496 aa32.24■■■□□ 2.75
SPEG-204ENST00000396689 CHMP7Q8WUX9 453 aaPredicted RBP32.24■■■□□ 2.75
SPEG-204ENST00000396689 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
SPEG-204ENST00000396689 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
SPEG-204ENST00000396689 WRNQ14191 1432 aaPredicted RBP eCLIP32.21■■■□□ 2.75
SPEG-204ENST00000396689 CYB5RLQ6IPT4 315 aa32.21■■■□□ 2.75
SPEG-204ENST00000396689 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
SPEG-204ENST00000396689 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
SPEG-204ENST00000396689 TOP2BQ02880 1626 aa32.2■■■□□ 2.75
SPEG-204ENST00000396689 ARAP1Q96P48 1450 aa32.19■■■□□ 2.74
SPEG-204ENST00000396689 CLASP1Q7Z460 1538 aa32.18■■■□□ 2.74
SPEG-204ENST00000396689 ERICH3Q5RHP9 1530 aa31.95■■■□□ 2.7
SPEG-204ENST00000396689 ADAMTS12P58397 1594 aa31.94■■■□□ 2.7
SPEG-204ENST00000396689 GRIN2AQ12879 1464 aa31.93■■■□□ 2.7
SPEG-204ENST00000396689 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
SPEG-204ENST00000396689 NUP160Q12769 1436 aa31.84■■■□□ 2.69
SPEG-204ENST00000396689 TRHP20396 242 aaPredicted RBP31.77■■■□□ 2.68
SPEG-204ENST00000396689 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
SPEG-204ENST00000396689 SHROOM2Q13796 1616 aa31.7■■■□□ 2.66
SPEG-204ENST00000396689 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
SPEG-204ENST00000396689 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
SPEG-204ENST00000396689 CUL7Q14999 1698 aa31.52■■■□□ 2.64
SPEG-204ENST00000396689 IGF1RP08069 1367 aa31.49■■■□□ 2.63
SPEG-204ENST00000396689 JPH4Q96JJ6 628 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms