RNA–Protein interactions for RNA: ENST00000341084.6

RNF19A-201, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF19A, Length 4,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-201ENST00000341084 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
RNF19A-201ENST00000341084 NISCHQ9Y2I1 1504 aa30.14■■■□□ 2.42
RNF19A-201ENST00000341084 SUPT5HO00267 1087 aaKnown RBP28.79■■■□□ 2.2
RNF19A-201ENST00000341084 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
RNF19A-201ENST00000341084 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
RNF19A-201ENST00000341084 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
RNF19A-201ENST00000341084 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
RNF19A-201ENST00000341084 HRCP23327 699 aa27.13■■□□□ 1.93
RNF19A-201ENST00000341084 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
RNF19A-201ENST00000341084 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
RNF19A-201ENST00000341084 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
RNF19A-201ENST00000341084 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
RNF19A-201ENST00000341084 ABCC9O60706 1549 aa26.6■■□□□ 1.85
RNF19A-201ENST00000341084 APLP2Q06481 763 aa26.58■■□□□ 1.85
RNF19A-201ENST00000341084 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
RNF19A-201ENST00000341084 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
RNF19A-201ENST00000341084 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
RNF19A-201ENST00000341084 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
RNF19A-201ENST00000341084 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
RNF19A-201ENST00000341084 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
RNF19A-201ENST00000341084 ZEB1P37275 1124 aaPredicted RBP26.19■■□□□ 1.78
RNF19A-201ENST00000341084 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
RNF19A-201ENST00000341084 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
RNF19A-201ENST00000341084 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.75
RNF19A-201ENST00000341084 CENPBP07199 599 aaPredicted RBP25.8■■□□□ 1.72
RNF19A-201ENST00000341084 YTHDC1Q96MU7 727 aaKnown RBP25.69■■□□□ 1.7
RNF19A-201ENST00000341084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.61■■□□□ 1.69
RNF19A-201ENST00000341084 HNRNPUL2Q1KMD3 747 aaKnown RBP25.59■■□□□ 1.69
RNF19A-201ENST00000341084 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
RNF19A-201ENST00000341084 SCAF1Q9H7N4 1312 aaKnown RBP25.43■■□□□ 1.66
RNF19A-201ENST00000341084 ITGAEP38570 1179 aa25.36■■□□□ 1.65
RNF19A-201ENST00000341084 MYT1LQ9UL68 1186 aa25.35■■□□□ 1.65
RNF19A-201ENST00000341084 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
RNF19A-201ENST00000341084 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
RNF19A-201ENST00000341084 ZCCHC6Q5VYS8 1495 aaKnown RBP25.33■■□□□ 1.65
RNF19A-201ENST00000341084 FBLN2P98095 1184 aa25.23■■□□□ 1.63
RNF19A-201ENST00000341084 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
RNF19A-201ENST00000341084 MYT1Q01538 1121 aa25.19■■□□□ 1.62
RNF19A-201ENST00000341084 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
RNF19A-201ENST00000341084 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
RNF19A-201ENST00000341084 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
RNF19A-201ENST00000341084 ARID3CA6NKF2 412 aa24.81■■□□□ 1.56
RNF19A-201ENST00000341084 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
RNF19A-201ENST00000341084 ZNF316A6NFI3 1004 aaPredicted RBP24.73■■□□□ 1.55
RNF19A-201ENST00000341084 POLR3GLQ9BT43 218 aa24.69■■□□□ 1.54
RNF19A-201ENST00000341084 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
RNF19A-201ENST00000341084 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
RNF19A-201ENST00000341084 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
RNF19A-201ENST00000341084 MIER1Q8N108 512 aa24.44■■□□□ 1.5
RNF19A-201ENST00000341084 BCANQ96GW7 911 aa24.43■■□□□ 1.5
RNF19A-201ENST00000341084 NEFLP07196 543 aa24.43■■□□□ 1.5
RNF19A-201ENST00000341084 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
RNF19A-201ENST00000341084 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
RNF19A-201ENST00000341084 ERICH6Q7L0X2 663 aa24.38■■□□□ 1.49
RNF19A-201ENST00000341084 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
RNF19A-201ENST00000341084 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
RNF19A-201ENST00000341084 SLC4A1APQ9BWU0 796 aaKnown RBP24.28■■□□□ 1.48
RNF19A-201ENST00000341084 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
RNF19A-201ENST00000341084 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
RNF19A-201ENST00000341084 NACADO15069 1562 aa24.09■■□□□ 1.45
RNF19A-201ENST00000341084 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.44
RNF19A-201ENST00000341084 NPM1P06748 294 aaKnown RBP eCLIP24.07■■□□□ 1.44
RNF19A-201ENST00000341084 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
RNF19A-201ENST00000341084 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
RNF19A-201ENST00000341084 CECR2Q9BXF3 1484 aa23.95■■□□□ 1.42
RNF19A-201ENST00000341084 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
RNF19A-201ENST00000341084 FKBP8Q14318 412 aa23.91■■□□□ 1.42
RNF19A-201ENST00000341084 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
RNF19A-201ENST00000341084 ESF1Q9H501 851 aaKnown RBP23.81■■□□□ 1.4
RNF19A-201ENST00000341084 KCNH8Q96L42 1107 aa23.8■■□□□ 1.4
RNF19A-201ENST00000341084 DDX10Q13206 875 aaKnown RBP23.79■■□□□ 1.4
RNF19A-201ENST00000341084 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
RNF19A-201ENST00000341084 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
RNF19A-201ENST00000341084 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
RNF19A-201ENST00000341084 SOGA1O94964 1423 aa23.74■■□□□ 1.39
RNF19A-201ENST00000341084 TNIKQ9UKE5 1360 aa23.73■■□□□ 1.39
RNF19A-201ENST00000341084 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
RNF19A-201ENST00000341084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.396e-14■■□□□ 13.4
RNF19A-201ENST00000341084 ANP32CO43423 234 aa23.7■■□□□ 1.39
RNF19A-201ENST00000341084 CLIP1P30622 1438 aa23.7■■□□□ 1.38
RNF19A-201ENST00000341084 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
RNF19A-201ENST00000341084 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
RNF19A-201ENST00000341084 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
RNF19A-201ENST00000341084 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
RNF19A-201ENST00000341084 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
RNF19A-201ENST00000341084 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
RNF19A-201ENST00000341084 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
RNF19A-201ENST00000341084 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
RNF19A-201ENST00000341084 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
RNF19A-201ENST00000341084 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
RNF19A-201ENST00000341084 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
RNF19A-201ENST00000341084 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
RNF19A-201ENST00000341084 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
RNF19A-201ENST00000341084 IRX6P78412 446 aaPredicted RBP23.53■■□□□ 1.36
RNF19A-201ENST00000341084 PLEKHD1A6NEE1 506 aa23.5■■□□□ 1.35
RNF19A-201ENST00000341084 TSHZ2Q9NRE2 1034 aa23.49■■□□□ 1.35
RNF19A-201ENST00000341084 EEA1Q15075 1411 aa23.46■■□□□ 1.35
RNF19A-201ENST00000341084 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
RNF19A-201ENST00000341084 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
RNF19A-201ENST00000341084 WIZO95785 1651 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms