Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.775e-7■□□□□ 8.4
LARP4Q71RC2 MGST2-205ENST00000515067 437 ntTSL 35.18□□□□□ -1.581e-27■□□□□ 8.4
LARP4Q71RC2 H3F3B-202ENST00000586270 468 ntTSL 222.57■■□□□ 1.28e-7■□□□□ 8.4
LARP4Q71RC2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.378e-7■□□□□ 8.4
LARP4Q71RC2 SNRNP200-202ENST00000429650 2637 ntTSL 213.35□□□□□ -0.278e-7■□□□□ 8.4
LARP4Q71RC2 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.151e-12■□□□□ 8.4
LARP4Q71RC2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.54□□□□□ -1.528e-7■□□□□ 8.4
LARP4Q71RC2 MORF4L1-214ENST00000559258 1047 ntTSL 24.99□□□□□ -1.618e-7■□□□□ 8.4
LARP4Q71RC2 ATP1A1-207ENST00000479960 611 ntTSL 211.88□□□□□ -0.511e-17■□□□□ 8.4
LARP4Q71RC2 APLP2-215ENST00000530493 1322 ntTSL 210.07□□□□□ -0.88e-27■□□□□ 8.4
LARP4Q71RC2 MALAT1-204ENST00000610481 353 ntTSL 3 BASIC10.01□□□□□ -0.811e-323■□□□□ 8.4
LARP4Q71RC2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.82■■□□□ 1.45e-10■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.63■□□□□ 0.098e-9■□□□□ 8.4
LARP4Q71RC2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.035e-10■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-205ENST00000547566 1234 ntTSL 1 (best)14.6□□□□□ -0.078e-9■□□□□ 8.4
LARP4Q71RC2 PIN1-203ENST00000585442 705 ntTSL 514.46□□□□□ -0.095e-10■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-209ENST00000550482 832 ntTSL 213.69□□□□□ -0.228e-9■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.13□□□□□ -0.318e-9■□□□□ 8.4
LARP4Q71RC2 PIN1-208ENST00000589058 536 ntTSL 313.05□□□□□ -0.325e-10■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.758e-9■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-206ENST00000547708 530 ntTSL 410.1□□□□□ -0.798e-9■□□□□ 8.4
LARP4Q71RC2 MLEC-203ENST00000535413 617 ntTSL 29.07□□□□□ -0.965e-10■□□□□ 8.4
LARP4Q71RC2 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC7.83□□□□□ -1.168e-9■□□□□ 8.4
LARP4Q71RC2 MLEC-204ENST00000535656 543 ntTSL 37.02□□□□□ -1.295e-10■□□□□ 8.4
LARP4Q71RC2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.01□□□□□ -1.458e-9■□□□□ 8.4
LARP4Q71RC2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.681e-11■□□□□ 8.4
LARP4Q71RC2 COL9A3-207ENST00000467819 993 ntTSL 1 (best)19.11■□□□□ 0.651e-11■□□□□ 8.4
LARP4Q71RC2 COL9A3-205ENST00000466192 2194 ntTSL 218■□□□□ 0.471e-11■□□□□ 8.4
LARP4Q71RC2 COL9A3-203ENST00000462700 1237 ntTSL 317.24■□□□□ 0.351e-11■□□□□ 8.4
LARP4Q71RC2 OPN3-204ENST00000469376 1961 ntTSL 1 (best)25.92■■□□□ 1.743e-7■□□□□ 8.4
LARP4Q71RC2 OPN3-205ENST00000478849 880 ntTSL 321.96■■□□□ 1.113e-7■□□□□ 8.4
LARP4Q71RC2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.083e-7■□□□□ 8.4
LARP4Q71RC2 OPN3-206ENST00000490673 1816 ntTSL 1 (best)21.42■■□□□ 1.023e-7■□□□□ 8.4
LARP4Q71RC2 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.233e-7■□□□□ 8.4
LARP4Q71RC2 CENPF-202ENST00000464322 689 ntTSL 212.83□□□□□ -0.363e-7■□□□□ 8.4
LARP4Q71RC2 CENPF-205ENST00000495259 345 ntTSL 312.64□□□□□ -0.393e-7■□□□□ 8.4
LARP4Q71RC2 CHML-201ENST00000366553 7594 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.673e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-202ENST00000463503 596 ntTSL 4 BASIC10.34□□□□□ -0.753e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC9.44□□□□□ -0.93e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.963e-7■□□□□ 8.4
LARP4Q71RC2 ATXN2L-219ENST00000566007 471 ntTSL 38.25□□□□□ -1.093e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-203ENST00000464138 533 ntTSL 37.17□□□□□ -1.263e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-207ENST00000478842 612 ntTSL 37.17□□□□□ -1.263e-7■□□□□ 8.4
LARP4Q71RC2 OPN3-203ENST00000463155 806 ntTSL 36.78□□□□□ -1.323e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.58□□□□□ -1.363e-7■□□□□ 8.4
LARP4Q71RC2 SSR3-209ENST00000498205 593 ntTSL 26.58□□□□□ -1.363e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.162e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-204ENST00000465445 2554 ntTSL 512.84□□□□□ -0.352e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-203ENST00000460049 2672 ntTSL 1 (best)12.59□□□□□ -0.392e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-205ENST00000535852 2471 ntTSL 1 (best)12.46□□□□□ -0.422e-7■□□□□ 8.4
LARP4Q71RC2 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.482e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.522e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-214ENST00000554892 658 ntTSL 29.97□□□□□ -0.812e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-212ENST00000554554 2955 ntTSL 29.55□□□□□ -0.882e-7■□□□□ 8.4
LARP4Q71RC2 AP1G2-232ENST00000557391 459 ntTSL 28.09□□□□□ -1.112e-7■□□□□ 8.4
LARP4Q71RC2 CFDP1-202ENST00000562602 699 ntTSL 37.48□□□□□ -1.212e-7■□□□□ 8.4
LARP4Q71RC2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.37□□□□□ -1.392e-7■□□□□ 8.4
LARP4Q71RC2 CFDP1-204ENST00000564793 457 ntTSL 35.77□□□□□ -1.492e-7■□□□□ 8.4
LARP4Q71RC2 CFDP1-209ENST00000570103 663 ntTSL 25.66□□□□□ -1.52e-7■□□□□ 8.4
LARP4Q71RC2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.18□□□□□ -1.582e-7■□□□□ 8.4
LARP4Q71RC2 KRTCAP2-206ENST00000487350 785 ntTSL 1 (best)19.85■□□□□ 0.771e-6■□□□□ 8.3
LARP4Q71RC2 NECAB3-213ENST00000488489 2142 ntTSL 219.81■□□□□ 0.764e-11■□□□□ 8.3
LARP4Q71RC2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.42■□□□□ 0.74e-11■□□□□ 8.3
LARP4Q71RC2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.654e-11■□□□□ 8.3
LARP4Q71RC2 NECAB3-209ENST00000483813 1277 ntTSL 518.71■□□□□ 0.594e-11■□□□□ 8.3
LARP4Q71RC2 NECAB3-218ENST00000606525 2010 ntTSL 218.63■□□□□ 0.574e-11■□□□□ 8.3
LARP4Q71RC2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.86■□□□□ 0.451e-6■□□□□ 8.3
LARP4Q71RC2 RBCK1-205ENST00000400245 1024 ntTSL 317.29■□□□□ 0.361e-6■□□□□ 8.3
LARP4Q71RC2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.17■□□□□ 0.181e-6■□□□□ 8.3
LARP4Q71RC2 RBCK1-210ENST00000441733 961 ntTSL 516.17■□□□□ 0.181e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.051e-6■□□□□ 8.3
LARP4Q71RC2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 01e-6■□□□□ 8.3
LARP4Q71RC2 CD7-205ENST00000582480 564 ntTSL 414.81□□□□□ -0.041e-6■□□□□ 8.3
LARP4Q71RC2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.091e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-205ENST00000482246 414 ntTSL 314.26□□□□□ -0.131e-6■□□□□ 8.3
LARP4Q71RC2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.281e-6■□□□□ 8.3
LARP4Q71RC2 MBTPS1-205ENST00000562906 2925 ntTSL 213.02□□□□□ -0.321e-6■□□□□ 8.3
LARP4Q71RC2 RBCK1-208ENST00000414880 765 ntTSL 312.82□□□□□ -0.361e-6■□□□□ 8.3
LARP4Q71RC2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.394e-11■□□□□ 8.3
LARP4Q71RC2 MBTPS1-216ENST00000570064 3086 ntTSL 212.52□□□□□ -0.41e-6■□□□□ 8.3
LARP4Q71RC2 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC12.51□□□□□ -0.411e-6■□□□□ 8.3
LARP4Q71RC2 MBTPS1-204ENST00000562886 3333 ntTSL 212.03□□□□□ -0.481e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-207ENST00000490672 3264 ntTSL 211.99□□□□□ -0.491e-6■□□□□ 8.3
LARP4Q71RC2 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.51e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-204ENST00000471891 578 ntTSL 311.86□□□□□ -0.511e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-209ENST00000492892 430 ntTSL 310.84□□□□□ -0.671e-6■□□□□ 8.3
LARP4Q71RC2 NECAB3-206ENST00000477778 462 ntTSL 310.69□□□□□ -0.74e-11■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-210ENST00000497317 477 ntTSL 310.66□□□□□ -0.71e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-208ENST00000491084 598 ntTSL 310.23□□□□□ -0.771e-6■□□□□ 8.3
LARP4Q71RC2 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.834e-11■□□□□ 8.3
LARP4Q71RC2 HPCAL1-204ENST00000422133 587 ntTSL 39.15□□□□□ -0.941e-6■□□□□ 8.3
LARP4Q71RC2 RBCK1-207ENST00000411647 593 ntTSL 38.99□□□□□ -0.971e-6■□□□□ 8.3
LARP4Q71RC2 BCKDHA-207ENST00000544905 562 ntTSL 28.57□□□□□ -1.041e-6■□□□□ 8.3
LARP4Q71RC2 KRTCAP2-202ENST00000461136 271 ntTSL 33.83□□□□□ -1.81e-6■□□□□ 8.3
LARP4Q71RC2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.284e-11■□□□□ 8.3
LARP4Q71RC2 NINJ1-203ENST00000470314 834 ntTSL 313.54□□□□□ -0.244e-11■□□□□ 8.3
LARP4Q71RC2 WBP2-208ENST00000588373 1374 ntTSL 213.76□□□□□ -0.216e-8■□□□□ 8.3
LARP4Q71RC2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.771e-17■□□□□ 8.3
LARP4Q71RC2 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 317.01■□□□□ 0.311e-17■□□□□ 8.3
LARP4Q71RC2 SRSF4-208ENST00000634348 8128 ntTSL 510.76□□□□□ -0.691e-17■□□□□ 8.3
Retrieved 100 of 15,922 protein–RNA pairs in 565.3 ms