RNA–Protein interactions for RNA: ENST00000422133.1

HPCAL1-204, Transcript of hippocalcin like 1, humanhuman

TSL 3

Gene HPCAL1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCAL1-204ENST00000422133 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
HPCAL1-204ENST00000422133 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
HPCAL1-204ENST00000422133 ABCC9O60706 1549 aa21.29■■□□□ 1
HPCAL1-204ENST00000422133 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
HPCAL1-204ENST00000422133 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
HPCAL1-204ENST00000422133 NACADO15069 1562 aa20.25■□□□□ 0.83
HPCAL1-204ENST00000422133 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
HPCAL1-204ENST00000422133 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
HPCAL1-204ENST00000422133 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
HPCAL1-204ENST00000422133 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
HPCAL1-204ENST00000422133 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
HPCAL1-204ENST00000422133 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
HPCAL1-204ENST00000422133 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
HPCAL1-204ENST00000422133 BICRAQ9NZM4 1560 aa19.75■□□□□ 0.75
HPCAL1-204ENST00000422133 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
HPCAL1-204ENST00000422133 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
HPCAL1-204ENST00000422133 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
HPCAL1-204ENST00000422133 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
HPCAL1-204ENST00000422133 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
HPCAL1-204ENST00000422133 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
HPCAL1-204ENST00000422133 BAZ1AQ9NRL2 1556 aaPredicted RBP18.78■□□□□ 0.6
HPCAL1-204ENST00000422133 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
HPCAL1-204ENST00000422133 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
HPCAL1-204ENST00000422133 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
HPCAL1-204ENST00000422133 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
HPCAL1-204ENST00000422133 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
HPCAL1-204ENST00000422133 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
HPCAL1-204ENST00000422133 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.56
HPCAL1-204ENST00000422133 WIZO95785 1651 aa18.56■□□□□ 0.56
HPCAL1-204ENST00000422133 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
HPCAL1-204ENST00000422133 NESP48681 1621 aa18.41■□□□□ 0.54
HPCAL1-204ENST00000422133 CUX2O14529 1486 aa18.38■□□□□ 0.53
HPCAL1-204ENST00000422133 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
HPCAL1-204ENST00000422133 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
HPCAL1-204ENST00000422133 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
HPCAL1-204ENST00000422133 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
HPCAL1-204ENST00000422133 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
HPCAL1-204ENST00000422133 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
HPCAL1-204ENST00000422133 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
HPCAL1-204ENST00000422133 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
HPCAL1-204ENST00000422133 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
HPCAL1-204ENST00000422133 CFTRP13569 1480 aa18.06■□□□□ 0.48
HPCAL1-204ENST00000422133 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
HPCAL1-204ENST00000422133 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
HPCAL1-204ENST00000422133 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
HPCAL1-204ENST00000422133 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
HPCAL1-204ENST00000422133 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
HPCAL1-204ENST00000422133 WDR62O43379 1518 aa17.88■□□□□ 0.45
HPCAL1-204ENST00000422133 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
HPCAL1-204ENST00000422133 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
HPCAL1-204ENST00000422133 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
HPCAL1-204ENST00000422133 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
HPCAL1-204ENST00000422133 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
HPCAL1-204ENST00000422133 CUX1P39880 1505 aa17.58■□□□□ 0.41
HPCAL1-204ENST00000422133 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
HPCAL1-204ENST00000422133 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
HPCAL1-204ENST00000422133 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
HPCAL1-204ENST00000422133 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
HPCAL1-204ENST00000422133 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
HPCAL1-204ENST00000422133 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
HPCAL1-204ENST00000422133 SOGA1O94964 1423 aa17.5■□□□□ 0.39
HPCAL1-204ENST00000422133 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
HPCAL1-204ENST00000422133 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
HPCAL1-204ENST00000422133 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
HPCAL1-204ENST00000422133 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
HPCAL1-204ENST00000422133 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
HPCAL1-204ENST00000422133 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
HPCAL1-204ENST00000422133 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
HPCAL1-204ENST00000422133 FBLN2P98095 1184 aa17.36■□□□□ 0.37
HPCAL1-204ENST00000422133 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
HPCAL1-204ENST00000422133 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
HPCAL1-204ENST00000422133 CHD1O14646 1710 aa17.3■□□□□ 0.36
HPCAL1-204ENST00000422133 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
HPCAL1-204ENST00000422133 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
HPCAL1-204ENST00000422133 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
HPCAL1-204ENST00000422133 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
HPCAL1-204ENST00000422133 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
HPCAL1-204ENST00000422133 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
HPCAL1-204ENST00000422133 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
HPCAL1-204ENST00000422133 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
HPCAL1-204ENST00000422133 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
HPCAL1-204ENST00000422133 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
HPCAL1-204ENST00000422133 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
HPCAL1-204ENST00000422133 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
HPCAL1-204ENST00000422133 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
HPCAL1-204ENST00000422133 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
HPCAL1-204ENST00000422133 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
HPCAL1-204ENST00000422133 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
HPCAL1-204ENST00000422133 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
HPCAL1-204ENST00000422133 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
HPCAL1-204ENST00000422133 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
HPCAL1-204ENST00000422133 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
HPCAL1-204ENST00000422133 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
HPCAL1-204ENST00000422133 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
HPCAL1-204ENST00000422133 IGF1RP08069 1367 aa17.01■□□□□ 0.31
HPCAL1-204ENST00000422133 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
HPCAL1-204ENST00000422133 NUP160Q12769 1436 aa16.96■□□□□ 0.31
HPCAL1-204ENST00000422133 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
HPCAL1-204ENST00000422133 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
HPCAL1-204ENST00000422133 CUL7Q14999 1698 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms