RNA–Protein interactions for RNA: ENST00000477778.5

NECAB3-206, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-206ENST00000477778 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
NECAB3-206ENST00000477778 ABCC9O60706 1549 aa28.1■■■□□ 2.09
NECAB3-206ENST00000477778 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
NECAB3-206ENST00000477778 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
NECAB3-206ENST00000477778 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
NECAB3-206ENST00000477778 NACADO15069 1562 aa26.33■■□□□ 1.81
NECAB3-206ENST00000477778 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.772e-7■■■□□ 15.5
NECAB3-206ENST00000477778 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
NECAB3-206ENST00000477778 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
NECAB3-206ENST00000477778 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
NECAB3-206ENST00000477778 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
NECAB3-206ENST00000477778 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
NECAB3-206ENST00000477778 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
NECAB3-206ENST00000477778 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
NECAB3-206ENST00000477778 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.66
NECAB3-206ENST00000477778 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
NECAB3-206ENST00000477778 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
NECAB3-206ENST00000477778 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
NECAB3-206ENST00000477778 DNAJC5Q9H3Z4 198 aa24.71■■□□□ 1.55
NECAB3-206ENST00000477778 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
NECAB3-206ENST00000477778 CUX2O14529 1486 aa24.32■■□□□ 1.48
NECAB3-206ENST00000477778 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
NECAB3-206ENST00000477778 ERCC6Q03468 1493 aa24.18■■□□□ 1.46
NECAB3-206ENST00000477778 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
NECAB3-206ENST00000477778 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
NECAB3-206ENST00000477778 NESP48681 1621 aa24.1■■□□□ 1.45
NECAB3-206ENST00000477778 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
NECAB3-206ENST00000477778 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
NECAB3-206ENST00000477778 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
NECAB3-206ENST00000477778 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
NECAB3-206ENST00000477778 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
NECAB3-206ENST00000477778 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
NECAB3-206ENST00000477778 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
NECAB3-206ENST00000477778 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
NECAB3-206ENST00000477778 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
NECAB3-206ENST00000477778 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
NECAB3-206ENST00000477778 WDR62O43379 1518 aa23.5■■□□□ 1.35
NECAB3-206ENST00000477778 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
NECAB3-206ENST00000477778 WIZO95785 1651 aa23.48■■□□□ 1.35
NECAB3-206ENST00000477778 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
NECAB3-206ENST00000477778 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
NECAB3-206ENST00000477778 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
NECAB3-206ENST00000477778 CFTRP13569 1480 aa23.27■■□□□ 1.32
NECAB3-206ENST00000477778 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
NECAB3-206ENST00000477778 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
NECAB3-206ENST00000477778 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
NECAB3-206ENST00000477778 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
NECAB3-206ENST00000477778 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
NECAB3-206ENST00000477778 ZNF608Q9ULD9 1512 aaPredicted RBP22.96■■□□□ 1.27
NECAB3-206ENST00000477778 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
NECAB3-206ENST00000477778 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
NECAB3-206ENST00000477778 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
NECAB3-206ENST00000477778 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
NECAB3-206ENST00000477778 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
NECAB3-206ENST00000477778 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
NECAB3-206ENST00000477778 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
NECAB3-206ENST00000477778 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
NECAB3-206ENST00000477778 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
NECAB3-206ENST00000477778 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
NECAB3-206ENST00000477778 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
NECAB3-206ENST00000477778 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.224e-8■■■■■ 29.8
NECAB3-206ENST00000477778 CHD1O14646 1710 aa22.66■■□□□ 1.22
NECAB3-206ENST00000477778 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
NECAB3-206ENST00000477778 CYB5RLQ6IPT4 315 aa22.61■■□□□ 1.21
NECAB3-206ENST00000477778 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
NECAB3-206ENST00000477778 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
NECAB3-206ENST00000477778 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
NECAB3-206ENST00000477778 FBLN2P98095 1184 aa22.44■■□□□ 1.18
NECAB3-206ENST00000477778 CLASP1Q7Z460 1538 aa22.44■■□□□ 1.18
NECAB3-206ENST00000477778 SOGA1O94964 1423 aa22.43■■□□□ 1.18
NECAB3-206ENST00000477778 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
NECAB3-206ENST00000477778 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
NECAB3-206ENST00000477778 CUX1P39880 1505 aa22.36■■□□□ 1.17
NECAB3-206ENST00000477778 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
NECAB3-206ENST00000477778 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
NECAB3-206ENST00000477778 MAGI1Q96QZ7 1491 aaPredicted RBP22.31■■□□□ 1.16
NECAB3-206ENST00000477778 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
NECAB3-206ENST00000477778 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
NECAB3-206ENST00000477778 SYNJ2O15056 1496 aa22.25■■□□□ 1.15
NECAB3-206ENST00000477778 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
NECAB3-206ENST00000477778 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
NECAB3-206ENST00000477778 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
NECAB3-206ENST00000477778 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
NECAB3-206ENST00000477778 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
NECAB3-206ENST00000477778 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
NECAB3-206ENST00000477778 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
NECAB3-206ENST00000477778 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
NECAB3-206ENST00000477778 NUP160Q12769 1436 aa21.99■■□□□ 1.11
NECAB3-206ENST00000477778 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
NECAB3-206ENST00000477778 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
NECAB3-206ENST00000477778 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
NECAB3-206ENST00000477778 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
NECAB3-206ENST00000477778 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
NECAB3-206ENST00000477778 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
NECAB3-206ENST00000477778 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
NECAB3-206ENST00000477778 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
NECAB3-206ENST00000477778 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
NECAB3-206ENST00000477778 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
NECAB3-206ENST00000477778 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
NECAB3-206ENST00000477778 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms