RNA–Protein interactions for RNA: ENST00000570103.5

CFDP1-209, Transcript of craniofacial development protein 1, humanhuman

TSL 2

Gene CFDP1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-209ENST00000570103 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
CFDP1-209ENST00000570103 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
CFDP1-209ENST00000570103 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
CFDP1-209ENST00000570103 PHF23Q9BUL5 403 aaPredicted RBP24.29■■□□□ 1.48
CFDP1-209ENST00000570103 FOXD1Q16676 465 aa23.06■■□□□ 1.28
CFDP1-209ENST00000570103 POTEDQ86YR6 584 aa22.09■■□□□ 1.13
CFDP1-209ENST00000570103 MSH5O43196 834 aa21.78■■□□□ 1.08
CFDP1-209ENST00000570103 PIAS4Q8N2W9 510 aaPredicted RBP21.43■■□□□ 1.02
CFDP1-209ENST00000570103 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
CFDP1-209ENST00000570103 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
CFDP1-209ENST00000570103 ADRA2BP18089 450 aa21.08■□□□□ 0.97
CFDP1-209ENST00000570103 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
CFDP1-209ENST00000570103 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
CFDP1-209ENST00000570103 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
CFDP1-209ENST00000570103 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
CFDP1-209ENST00000570103 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
CFDP1-209ENST00000570103 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
CFDP1-209ENST00000570103 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
CFDP1-209ENST00000570103 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
CFDP1-209ENST00000570103 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
CFDP1-209ENST00000570103 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
CFDP1-209ENST00000570103 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
CFDP1-209ENST00000570103 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
CFDP1-209ENST00000570103 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
CFDP1-209ENST00000570103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■□□□□ 8.2
CFDP1-209ENST00000570103 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
CFDP1-209ENST00000570103 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
CFDP1-209ENST00000570103 POTEHQ6S545 545 aa17.21■□□□□ 0.35
CFDP1-209ENST00000570103 DSG3P32926 999 aa17.19■□□□□ 0.34
CFDP1-209ENST00000570103 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
CFDP1-209ENST00000570103 CAPN15O75808 1086 aa17.16■□□□□ 0.34
CFDP1-209ENST00000570103 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
CFDP1-209ENST00000570103 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
CFDP1-209ENST00000570103 APLP2Q06481 763 aa16.75■□□□□ 0.27
CFDP1-209ENST00000570103 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
CFDP1-209ENST00000570103 ABCB7O75027 752 aa16.71■□□□□ 0.27
CFDP1-209ENST00000570103 KCNA4P22459 653 aa16.69■□□□□ 0.26
CFDP1-209ENST00000570103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
CFDP1-209ENST00000570103 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
CFDP1-209ENST00000570103 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
CFDP1-209ENST00000570103 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
CFDP1-209ENST00000570103 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
CFDP1-209ENST00000570103 POLA2Q14181 598 aa16.21■□□□□ 0.19
CFDP1-209ENST00000570103 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
CFDP1-209ENST00000570103 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
CFDP1-209ENST00000570103 SP7Q8TDD2 431 aaPredicted RBP15.9■□□□□ 0.14
CFDP1-209ENST00000570103 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
CFDP1-209ENST00000570103 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
CFDP1-209ENST00000570103 REM2Q8IYK8 340 aaPredicted RBP15.79■□□□□ 0.12
CFDP1-209ENST00000570103 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
CFDP1-209ENST00000570103 FOXD4L1Q9NU39 408 aa15.73■□□□□ 0.11
CFDP1-209ENST00000570103 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
CFDP1-209ENST00000570103 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
CFDP1-209ENST00000570103 PITPNM1O00562 1244 aa15.62■□□□□ 0.09
CFDP1-209ENST00000570103 HAX1O00165 279 aa15.61■□□□□ 0.09
CFDP1-209ENST00000570103 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
CFDP1-209ENST00000570103 EVX2Q03828 476 aa15.37■□□□□ 0.05
CFDP1-209ENST00000570103 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
CFDP1-209ENST00000570103 ZBTB22O15209 634 aa15.33■□□□□ 0.04
CFDP1-209ENST00000570103 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
CFDP1-209ENST00000570103 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
CFDP1-209ENST00000570103 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
CFDP1-209ENST00000570103 FBLN2P98095 1184 aa15.26■□□□□ 0.03
CFDP1-209ENST00000570103 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
CFDP1-209ENST00000570103 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
CFDP1-209ENST00000570103 CLEC11AQ9Y240 323 aa15.16■□□□□ 0.02
CFDP1-209ENST00000570103 C19orf67A6NJJ6 358 aa15.11■□□□□ 0.01
CFDP1-209ENST00000570103 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
CFDP1-209ENST00000570103 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
CFDP1-209ENST00000570103 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
CFDP1-209ENST00000570103 GABBR2O75899 941 aa15□□□□□ -0.01
CFDP1-209ENST00000570103 LHX8Q68G74 356 aa14.92□□□□□ -0.02
CFDP1-209ENST00000570103 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
CFDP1-209ENST00000570103 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
CFDP1-209ENST00000570103 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
CFDP1-209ENST00000570103 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
CFDP1-209ENST00000570103 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
CFDP1-209ENST00000570103 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
CFDP1-209ENST00000570103 CLCN6P51797 869 aa14.63□□□□□ -0.07
CFDP1-209ENST00000570103 DCBLD2Q96PD2 775 aa14.5□□□□□ -0.09
CFDP1-209ENST00000570103 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
CFDP1-209ENST00000570103 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
CFDP1-209ENST00000570103 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
CFDP1-209ENST00000570103 PLSCR2Q9NRY7 297 aa14.34□□□□□ -0.11
CFDP1-209ENST00000570103 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
CFDP1-209ENST00000570103 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
CFDP1-209ENST00000570103 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
CFDP1-209ENST00000570103 POTEB2H3BUK9 544 aa14.19□□□□□ -0.14
CFDP1-209ENST00000570103 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
CFDP1-209ENST00000570103 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
CFDP1-209ENST00000570103 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
CFDP1-209ENST00000570103 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
CFDP1-209ENST00000570103 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
CFDP1-209ENST00000570103 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
CFDP1-209ENST00000570103 POTEMA6NI47 508 aa14.06□□□□□ -0.16
CFDP1-209ENST00000570103 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
CFDP1-209ENST00000570103 POTEGQ6S5H5 508 aa14□□□□□ -0.17
CFDP1-209ENST00000570103 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
CFDP1-209ENST00000570103 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
CFDP1-209ENST00000570103 METRNQ9UJH8 293 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms