RNA–Protein interactions for RNA: ENST00000479960.1

ATP1A1-207, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 611 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-207ENST00000479960 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
ATP1A1-207ENST00000479960 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
ATP1A1-207ENST00000479960 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
ATP1A1-207ENST00000479960 ABCC9O60706 1549 aa23.55■■□□□ 1.36
ATP1A1-207ENST00000479960 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
ATP1A1-207ENST00000479960 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
ATP1A1-207ENST00000479960 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
ATP1A1-207ENST00000479960 NACADO15069 1562 aa23.11■■□□□ 1.29
ATP1A1-207ENST00000479960 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
ATP1A1-207ENST00000479960 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
ATP1A1-207ENST00000479960 SCRIBQ14160 1630 aa22.67■■□□□ 1.22
ATP1A1-207ENST00000479960 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
ATP1A1-207ENST00000479960 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
ATP1A1-207ENST00000479960 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
ATP1A1-207ENST00000479960 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
ATP1A1-207ENST00000479960 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
ATP1A1-207ENST00000479960 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
ATP1A1-207ENST00000479960 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
ATP1A1-207ENST00000479960 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
ATP1A1-207ENST00000479960 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
ATP1A1-207ENST00000479960 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
ATP1A1-207ENST00000479960 WIZO95785 1651 aa21.56■■□□□ 1.04
ATP1A1-207ENST00000479960 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
ATP1A1-207ENST00000479960 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
ATP1A1-207ENST00000479960 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
ATP1A1-207ENST00000479960 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
ATP1A1-207ENST00000479960 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
ATP1A1-207ENST00000479960 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
ATP1A1-207ENST00000479960 NCAPD3P42695 1498 aa21.27■■□□□ 1
ATP1A1-207ENST00000479960 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
ATP1A1-207ENST00000479960 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
ATP1A1-207ENST00000479960 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
ATP1A1-207ENST00000479960 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
ATP1A1-207ENST00000479960 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
ATP1A1-207ENST00000479960 CFTRP13569 1480 aa20.73■□□□□ 0.91
ATP1A1-207ENST00000479960 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
ATP1A1-207ENST00000479960 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
ATP1A1-207ENST00000479960 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
ATP1A1-207ENST00000479960 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
ATP1A1-207ENST00000479960 NESP48681 1621 aa20.56■□□□□ 0.88
ATP1A1-207ENST00000479960 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
ATP1A1-207ENST00000479960 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
ATP1A1-207ENST00000479960 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
ATP1A1-207ENST00000479960 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
ATP1A1-207ENST00000479960 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
ATP1A1-207ENST00000479960 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
ATP1A1-207ENST00000479960 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
ATP1A1-207ENST00000479960 BIVM-ERCC5R4GMW8 1640 aa20.37■□□□□ 0.85
ATP1A1-207ENST00000479960 CUX1P39880 1505 aa20.33■□□□□ 0.85
ATP1A1-207ENST00000479960 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
ATP1A1-207ENST00000479960 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
ATP1A1-207ENST00000479960 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
ATP1A1-207ENST00000479960 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
ATP1A1-207ENST00000479960 FAM9AQ8IZU1 332 aaPredicted RBP20.22■□□□□ 0.83
ATP1A1-207ENST00000479960 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
ATP1A1-207ENST00000479960 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
ATP1A1-207ENST00000479960 EEA1Q15075 1411 aa20.18■□□□□ 0.82
ATP1A1-207ENST00000479960 SOGA1O94964 1423 aa20.12■□□□□ 0.81
ATP1A1-207ENST00000479960 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
ATP1A1-207ENST00000479960 WDR62O43379 1518 aa20.09■□□□□ 0.81
ATP1A1-207ENST00000479960 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
ATP1A1-207ENST00000479960 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
ATP1A1-207ENST00000479960 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
ATP1A1-207ENST00000479960 RUSC2Q8N2Y8 1516 aa20.03■□□□□ 0.8
ATP1A1-207ENST00000479960 CUX2O14529 1486 aa20.03■□□□□ 0.8
ATP1A1-207ENST00000479960 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
ATP1A1-207ENST00000479960 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
ATP1A1-207ENST00000479960 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
ATP1A1-207ENST00000479960 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
ATP1A1-207ENST00000479960 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
ATP1A1-207ENST00000479960 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
ATP1A1-207ENST00000479960 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
ATP1A1-207ENST00000479960 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
ATP1A1-207ENST00000479960 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
ATP1A1-207ENST00000479960 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
ATP1A1-207ENST00000479960 KIF21BO75037 1637 aa19.87■□□□□ 0.77
ATP1A1-207ENST00000479960 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
ATP1A1-207ENST00000479960 GOLGA3Q08378 1498 aa19.85■□□□□ 0.77
ATP1A1-207ENST00000479960 IGF1RP08069 1367 aa19.84■□□□□ 0.77
ATP1A1-207ENST00000479960 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
ATP1A1-207ENST00000479960 CUL7Q14999 1698 aa19.8■□□□□ 0.76
ATP1A1-207ENST00000479960 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
ATP1A1-207ENST00000479960 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
ATP1A1-207ENST00000479960 PBRM1Q86U86 1689 aa19.79■□□□□ 0.76
ATP1A1-207ENST00000479960 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.766e-6■■■■□ 23.2
ATP1A1-207ENST00000479960 PRXQ9BXM0 1461 aa19.78■□□□□ 0.76
ATP1A1-207ENST00000479960 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
ATP1A1-207ENST00000479960 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
ATP1A1-207ENST00000479960 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
ATP1A1-207ENST00000479960 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
ATP1A1-207ENST00000479960 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
ATP1A1-207ENST00000479960 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
ATP1A1-207ENST00000479960 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
ATP1A1-207ENST00000479960 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
ATP1A1-207ENST00000479960 SNAPC4Q5SXM2 1469 aa19.61■□□□□ 0.73
ATP1A1-207ENST00000479960 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
ATP1A1-207ENST00000479960 CEP162Q5TB80 1403 aa19.58■□□□□ 0.72
ATP1A1-207ENST00000479960 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
ATP1A1-207ENST00000479960 FBLN2P98095 1184 aa19.55■□□□□ 0.72
ATP1A1-207ENST00000479960 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms