RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 NISCHQ9Y2I1 1504 aa43.55■■■■■ 4.56
NECAB3-202ENST00000375238 CCDC180Q9P1Z9 1646 aa37.99■■■■□ 3.67
NECAB3-202ENST00000375238 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
NECAB3-202ENST00000375238 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
NECAB3-202ENST00000375238 ABCC9O60706 1549 aa35.98■■■■□ 3.35
NECAB3-202ENST00000375238 DCAF1Q9Y4B6 1507 aa35.97■■■■□ 3.35
NECAB3-202ENST00000375238 SHROOM4Q9ULL8 1493 aa35.61■■■■□ 3.29
NECAB3-202ENST00000375238 MYO15BQ96JP2 1530 aa35.53■■■■□ 3.28
NECAB3-202ENST00000375238 NACADO15069 1562 aa35.37■■■■□ 3.25
NECAB3-202ENST00000375238 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
NECAB3-202ENST00000375238 SCRIBQ14160 1630 aa35■■■■□ 3.19
NECAB3-202ENST00000375238 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
NECAB3-202ENST00000375238 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
NECAB3-202ENST00000375238 BICRAQ9NZM4 1560 aa34.03■■■■□ 3.04
NECAB3-202ENST00000375238 PABPN1Q86U42 306 aaKnown RBP eCLIP33.92■■■■□ 3.022e-7■■■□□ 15
NECAB3-202ENST00000375238 CECR2Q9BXF3 1484 aa33.86■■■■□ 3.01
NECAB3-202ENST00000375238 RSF1Q96T23 1441 aaPredicted RBP33.78■■■■□ 3
NECAB3-202ENST00000375238 MROH2BQ7Z745 1585 aa33.67■■■□□ 2.98
NECAB3-202ENST00000375238 BAZ1AQ9NRL2 1556 aaPredicted RBP33.64■■■□□ 2.98
NECAB3-202ENST00000375238 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
NECAB3-202ENST00000375238 WIZO95785 1651 aa33.42■■■□□ 2.94
NECAB3-202ENST00000375238 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
NECAB3-202ENST00000375238 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
NECAB3-202ENST00000375238 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
NECAB3-202ENST00000375238 ATAD2BQ9ULI0 1458 aa32.93■■■□□ 2.86
NECAB3-202ENST00000375238 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
NECAB3-202ENST00000375238 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
NECAB3-202ENST00000375238 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
NECAB3-202ENST00000375238 CCDC88BA6NC98 1476 aa32.7■■■□□ 2.83
NECAB3-202ENST00000375238 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
NECAB3-202ENST00000375238 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
NECAB3-202ENST00000375238 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
NECAB3-202ENST00000375238 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
NECAB3-202ENST00000375238 ABCC8Q09428 1581 aa32.05■■■□□ 2.72
NECAB3-202ENST00000375238 CFTRP13569 1480 aa31.91■■■□□ 2.7
NECAB3-202ENST00000375238 PRDM2Q13029 1718 aa31.82■■■□□ 2.68
NECAB3-202ENST00000375238 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.686e-7■■■■■ 33.4
NECAB3-202ENST00000375238 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
NECAB3-202ENST00000375238 DNAJC5BQ9UF47 199 aa31.71■■■□□ 2.67
NECAB3-202ENST00000375238 SYNJ1O43426 1573 aa31.7■■■□□ 2.67
NECAB3-202ENST00000375238 FAM9AQ8IZU1 332 aaPredicted RBP31.63■■■□□ 2.65
NECAB3-202ENST00000375238 NESP48681 1621 aa31.58■■■□□ 2.65
NECAB3-202ENST00000375238 TOP2BQ02880 1626 aa31.56■■■□□ 2.64
NECAB3-202ENST00000375238 LAMC3Q9Y6N6 1575 aa31.55■■■□□ 2.64
NECAB3-202ENST00000375238 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
NECAB3-202ENST00000375238 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
NECAB3-202ENST00000375238 FANCD2Q9BXW9 1451 aa31.48■■■□□ 2.63
NECAB3-202ENST00000375238 CUX1P39880 1505 aa31.48■■■□□ 2.63
NECAB3-202ENST00000375238 SOGA1O94964 1423 aa31.43■■■□□ 2.62
NECAB3-202ENST00000375238 EEA1Q15075 1411 aa31.33■■■□□ 2.61
NECAB3-202ENST00000375238 RUSC2Q8N2Y8 1516 aa31.32■■■□□ 2.6
NECAB3-202ENST00000375238 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
NECAB3-202ENST00000375238 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
NECAB3-202ENST00000375238 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
NECAB3-202ENST00000375238 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
NECAB3-202ENST00000375238 DNMBPQ6XZF7 1577 aa31.2■■■□□ 2.59
NECAB3-202ENST00000375238 CSRNP3Q8WYN3 585 aa31.18■■■□□ 2.58
NECAB3-202ENST00000375238 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
NECAB3-202ENST00000375238 TOPBP1Q92547 1522 aa31.14■■■□□ 2.58
NECAB3-202ENST00000375238 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
NECAB3-202ENST00000375238 KIF27Q86VH2 1401 aa31.01■■■□□ 2.56
NECAB3-202ENST00000375238 PCGF6Q9BYE7 350 aa30.99■■■□□ 2.55
NECAB3-202ENST00000375238 POLA1P09884 1462 aaPredicted RBP30.99■■■□□ 2.55
NECAB3-202ENST00000375238 KIF21BO75037 1637 aa30.96■■■□□ 2.55
NECAB3-202ENST00000375238 CUX2O14529 1486 aa30.95■■■□□ 2.55
NECAB3-202ENST00000375238 GOLGA3Q08378 1498 aa30.93■■■□□ 2.54
NECAB3-202ENST00000375238 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
NECAB3-202ENST00000375238 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
NECAB3-202ENST00000375238 ERCC6Q03468 1493 aa30.85■■■□□ 2.53
NECAB3-202ENST00000375238 ABCA10Q8WWZ4 1543 aa30.84■■■□□ 2.53
NECAB3-202ENST00000375238 UBTFP17480 764 aaKnown RBP30.83■■■□□ 2.53
NECAB3-202ENST00000375238 HRCP23327 699 aa30.83■■■□□ 2.53
NECAB3-202ENST00000375238 TNIKQ9UKE5 1360 aa30.81■■■□□ 2.52
NECAB3-202ENST00000375238 RAPGEF2Q9Y4G8 1499 aa30.78■■■□□ 2.52
NECAB3-202ENST00000375238 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
NECAB3-202ENST00000375238 PRXQ9BXM0 1461 aa30.77■■■□□ 2.52
NECAB3-202ENST00000375238 WDR62O43379 1518 aa30.74■■■□□ 2.51
NECAB3-202ENST00000375238 ERICH3Q5RHP9 1530 aa30.74■■■□□ 2.51
NECAB3-202ENST00000375238 IGF1RP08069 1367 aa30.71■■■□□ 2.51
NECAB3-202ENST00000375238 TARBP1Q13395 1621 aaKnown RBP30.68■■■□□ 2.5
NECAB3-202ENST00000375238 CEP162Q5TB80 1403 aa30.67■■■□□ 2.5
NECAB3-202ENST00000375238 THOC2Q8NI27 1593 aaKnown RBP30.67■■■□□ 2.5
NECAB3-202ENST00000375238 TRIM26Q12899 539 aaPredicted RBP30.65■■■□□ 2.5
NECAB3-202ENST00000375238 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
NECAB3-202ENST00000375238 TDRD9Q8NDG6 1382 aaKnown RBP30.6■■■□□ 2.49
NECAB3-202ENST00000375238 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
NECAB3-202ENST00000375238 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
NECAB3-202ENST00000375238 IFT140Q96RY7 1462 aa30.53■■■□□ 2.48
NECAB3-202ENST00000375238 CUL7Q14999 1698 aa30.52■■■□□ 2.48
NECAB3-202ENST00000375238 CLIP1P30622 1438 aa30.44■■■□□ 2.46
NECAB3-202ENST00000375238 PBRM1Q86U86 1689 aa30.43■■■□□ 2.46
NECAB3-202ENST00000375238 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.462e-7■■■■■ 29.3
NECAB3-202ENST00000375238 RANGAP1P46060 587 aaPredicted RBP30.38■■■□□ 2.45
NECAB3-202ENST00000375238 ZNF608Q9ULD9 1512 aaPredicted RBP30.38■■■□□ 2.45
NECAB3-202ENST00000375238 GRIN2BQ13224 1484 aa30.31■■■□□ 2.44
NECAB3-202ENST00000375238 EIF4G3O43432 1585 aaKnown RBP30.29■■■□□ 2.44
NECAB3-202ENST00000375238 ADAMTS12P58397 1594 aa30.23■■■□□ 2.43
NECAB3-202ENST00000375238 CTTNBP2Q8WZ74 1663 aa30.21■■■□□ 2.43
NECAB3-202ENST00000375238 FHAD1B1AJZ9 1412 aa30.21■■■□□ 2.43
NECAB3-202ENST00000375238 VPS8Q8N3P4 1428 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms