RNA–Protein interactions for RNA: ENST00000414880.1

RBCK1-208, Transcript of RANBP2-type and C3HC4-type zinc finger containing 1, humanhuman

TSL 3

Gene RBCK1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBCK1-208ENST00000414880 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
RBCK1-208ENST00000414880 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
RBCK1-208ENST00000414880 ABCC9O60706 1549 aa31.03■■■□□ 2.56
RBCK1-208ENST00000414880 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.33
RBCK1-208ENST00000414880 NACADO15069 1562 aa29.48■■■□□ 2.31
RBCK1-208ENST00000414880 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
RBCK1-208ENST00000414880 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.25
RBCK1-208ENST00000414880 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
RBCK1-208ENST00000414880 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
RBCK1-208ENST00000414880 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
RBCK1-208ENST00000414880 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
RBCK1-208ENST00000414880 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
RBCK1-208ENST00000414880 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
RBCK1-208ENST00000414880 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
RBCK1-208ENST00000414880 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
RBCK1-208ENST00000414880 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
RBCK1-208ENST00000414880 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
RBCK1-208ENST00000414880 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.06
RBCK1-208ENST00000414880 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
RBCK1-208ENST00000414880 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
RBCK1-208ENST00000414880 ATAD2BQ9ULI0 1458 aa27.17■■□□□ 1.94
RBCK1-208ENST00000414880 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
RBCK1-208ENST00000414880 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
RBCK1-208ENST00000414880 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
RBCK1-208ENST00000414880 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
RBCK1-208ENST00000414880 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
RBCK1-208ENST00000414880 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
RBCK1-208ENST00000414880 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
RBCK1-208ENST00000414880 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
RBCK1-208ENST00000414880 NESP48681 1621 aa26.74■■□□□ 1.87
RBCK1-208ENST00000414880 WIZO95785 1651 aa26.69■■□□□ 1.86
RBCK1-208ENST00000414880 CUX2O14529 1486 aa26.61■■□□□ 1.85
RBCK1-208ENST00000414880 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
RBCK1-208ENST00000414880 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
RBCK1-208ENST00000414880 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
RBCK1-208ENST00000414880 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
RBCK1-208ENST00000414880 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
RBCK1-208ENST00000414880 PDS5BQ9NTI5 1447 aa26.36■■□□□ 1.81
RBCK1-208ENST00000414880 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
RBCK1-208ENST00000414880 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
RBCK1-208ENST00000414880 CFTRP13569 1480 aa26.14■■□□□ 1.78
RBCK1-208ENST00000414880 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
RBCK1-208ENST00000414880 WDR62O43379 1518 aa26.12■■□□□ 1.77
RBCK1-208ENST00000414880 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
RBCK1-208ENST00000414880 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
RBCK1-208ENST00000414880 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
RBCK1-208ENST00000414880 URB2Q14146 1524 aaKnown RBP25.89■■□□□ 1.74
RBCK1-208ENST00000414880 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
RBCK1-208ENST00000414880 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
RBCK1-208ENST00000414880 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
RBCK1-208ENST00000414880 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
RBCK1-208ENST00000414880 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
RBCK1-208ENST00000414880 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
RBCK1-208ENST00000414880 EIF4G3O43432 1585 aaKnown RBP25.45■■□□□ 1.66
RBCK1-208ENST00000414880 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
RBCK1-208ENST00000414880 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
RBCK1-208ENST00000414880 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
RBCK1-208ENST00000414880 CUX1P39880 1505 aa25.32■■□□□ 1.64
RBCK1-208ENST00000414880 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.648e-7■■■■■ 28.7
RBCK1-208ENST00000414880 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
RBCK1-208ENST00000414880 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
RBCK1-208ENST00000414880 SOGA1O94964 1423 aa25.25■■□□□ 1.63
RBCK1-208ENST00000414880 CHD1O14646 1710 aa25.24■■□□□ 1.63
RBCK1-208ENST00000414880 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
RBCK1-208ENST00000414880 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
RBCK1-208ENST00000414880 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
RBCK1-208ENST00000414880 RIMBP3CA6NJZ7 1639 aa25.13■■□□□ 1.61
RBCK1-208ENST00000414880 RIMBP3BA6NNM3 1639 aa25.13■■□□□ 1.61
RBCK1-208ENST00000414880 RIMBP3Q9UFD9 1639 aa25.13■■□□□ 1.61
RBCK1-208ENST00000414880 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
RBCK1-208ENST00000414880 PBRM1Q86U86 1689 aa25.05■■□□□ 1.6
RBCK1-208ENST00000414880 FBLN2P98095 1184 aa25.05■■□□□ 1.6
RBCK1-208ENST00000414880 ARHGEF11O15085 1522 aa25.05■■□□□ 1.6
RBCK1-208ENST00000414880 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
RBCK1-208ENST00000414880 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
RBCK1-208ENST00000414880 MAGI1Q96QZ7 1491 aaPredicted RBP25.01■■□□□ 1.59
RBCK1-208ENST00000414880 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
RBCK1-208ENST00000414880 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
RBCK1-208ENST00000414880 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
RBCK1-208ENST00000414880 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
RBCK1-208ENST00000414880 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
RBCK1-208ENST00000414880 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
RBCK1-208ENST00000414880 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
RBCK1-208ENST00000414880 CLASP1Q7Z460 1538 aa24.9■■□□□ 1.58
RBCK1-208ENST00000414880 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
RBCK1-208ENST00000414880 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
RBCK1-208ENST00000414880 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
RBCK1-208ENST00000414880 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
RBCK1-208ENST00000414880 GRIN2AQ12879 1464 aa24.73■■□□□ 1.55
RBCK1-208ENST00000414880 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
RBCK1-208ENST00000414880 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
RBCK1-208ENST00000414880 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
RBCK1-208ENST00000414880 NUP160Q12769 1436 aa24.62■■□□□ 1.53
RBCK1-208ENST00000414880 ERCC6L2Q5T890 1561 aa24.56■■□□□ 1.52
RBCK1-208ENST00000414880 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
RBCK1-208ENST00000414880 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
RBCK1-208ENST00000414880 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
RBCK1-208ENST00000414880 CUL7Q14999 1698 aa24.43■■□□□ 1.5
RBCK1-208ENST00000414880 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
RBCK1-208ENST00000414880 IGF1RP08069 1367 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms