RNA–Protein interactions for RNA: ENST00000246190.10

NECAB3-201, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5 BASIC

Gene NECAB3, Length 1,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-201ENST00000246190 NISCHQ9Y2I1 1504 aa47.42■■■■■ 5.18
NECAB3-201ENST00000246190 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
NECAB3-201ENST00000246190 ABCC9O60706 1549 aa40.08■■■■■ 4.01
NECAB3-201ENST00000246190 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
NECAB3-201ENST00000246190 DCAF8L2P0C7V8 631 aa39.53■■■■□ 3.92
NECAB3-201ENST00000246190 DCAF1Q9Y4B6 1507 aa39.11■■■■□ 3.85
NECAB3-201ENST00000246190 NACADO15069 1562 aa38.9■■■■□ 3.82
NECAB3-201ENST00000246190 MYO15BQ96JP2 1530 aa38.87■■■■□ 3.81
NECAB3-201ENST00000246190 RB1CC1Q8TDY2 1594 aa38.75■■■■□ 3.79
NECAB3-201ENST00000246190 SHROOM4Q9ULL8 1493 aa38.38■■■■□ 3.73
NECAB3-201ENST00000246190 SCRIBQ14160 1630 aa38.28■■■■□ 3.72
NECAB3-201ENST00000246190 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
NECAB3-201ENST00000246190 PABPN1Q86U42 306 aaKnown RBP eCLIP37.71■■■■□ 3.632e-7■■■□□ 15
NECAB3-201ENST00000246190 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
NECAB3-201ENST00000246190 CECR2Q9BXF3 1484 aa36.99■■■■□ 3.51
NECAB3-201ENST00000246190 MROH2BQ7Z745 1585 aa36.67■■■■□ 3.46
NECAB3-201ENST00000246190 BAZ1AQ9NRL2 1556 aaPredicted RBP36.63■■■■□ 3.46
NECAB3-201ENST00000246190 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
NECAB3-201ENST00000246190 SUPT5HO00267 1087 aaKnown RBP36.58■■■■□ 3.45
NECAB3-201ENST00000246190 EIF4G1Q04637 1599 aaKnown RBP36.56■■■■□ 3.44
NECAB3-201ENST00000246190 RSF1Q96T23 1441 aaPredicted RBP36.56■■■■□ 3.44
NECAB3-201ENST00000246190 WIZO95785 1651 aa36.35■■■■□ 3.41
NECAB3-201ENST00000246190 CC2D2AQ9P2K1 1620 aa36.21■■■■□ 3.39
NECAB3-201ENST00000246190 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
NECAB3-201ENST00000246190 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
NECAB3-201ENST00000246190 SMARCA2P51531 1590 aa36.07■■■■□ 3.36
NECAB3-201ENST00000246190 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
NECAB3-201ENST00000246190 NCAPD3P42695 1498 aa35.93■■■■□ 3.34
NECAB3-201ENST00000246190 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
NECAB3-201ENST00000246190 TOP2AP11388 1531 aaKnown RBP35.87■■■■□ 3.33
NECAB3-201ENST00000246190 HMGXB3Q12766 1538 aa35.8■■■■□ 3.32
NECAB3-201ENST00000246190 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
NECAB3-201ENST00000246190 NESP48681 1621 aa35■■■■□ 3.19
NECAB3-201ENST00000246190 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
NECAB3-201ENST00000246190 CFTRP13569 1480 aa34.97■■■■□ 3.19
NECAB3-201ENST00000246190 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
NECAB3-201ENST00000246190 PRDM2Q13029 1718 aa34.71■■■■□ 3.15
NECAB3-201ENST00000246190 ABCC8Q09428 1581 aa34.64■■■■□ 3.14
NECAB3-201ENST00000246190 FANCD2Q9BXW9 1451 aa34.62■■■■□ 3.13
NECAB3-201ENST00000246190 CHIC1Q5VXU3 224 aa34.6■■■■□ 3.13
NECAB3-201ENST00000246190 PDS5BQ9NTI5 1447 aa34.56■■■■□ 3.12
NECAB3-201ENST00000246190 KIF21AQ7Z4S6 1674 aa34.53■■■■□ 3.12
NECAB3-201ENST00000246190 CEP164Q9UPV0 1460 aa34.45■■■■□ 3.11
NECAB3-201ENST00000246190 WRNQ14191 1432 aaPredicted RBP eCLIP34.41■■■■□ 3.16e-7■■■■■ 33.4
NECAB3-201ENST00000246190 ERCC6Q03468 1493 aa34.38■■■■□ 3.09
NECAB3-201ENST00000246190 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
NECAB3-201ENST00000246190 SYNJ1O43426 1573 aa34.34■■■■□ 3.09
NECAB3-201ENST00000246190 CUX1P39880 1505 aa34.31■■■■□ 3.08
NECAB3-201ENST00000246190 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
NECAB3-201ENST00000246190 TOP2BQ02880 1626 aa34.2■■■■□ 3.06
NECAB3-201ENST00000246190 MRC2Q9UBG0 1479 aa34.17■■■■□ 3.06
NECAB3-201ENST00000246190 TOPBP1Q92547 1522 aa34.17■■■■□ 3.06
NECAB3-201ENST00000246190 BIVM-ERCC5R4GMW8 1640 aa34.16■■■■□ 3.06
NECAB3-201ENST00000246190 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
NECAB3-201ENST00000246190 THOC2Q8NI27 1593 aaKnown RBP34.1■■■■□ 3.05
NECAB3-201ENST00000246190 FGD5Q6ZNL6 1462 aa34.03■■■■□ 3.04
NECAB3-201ENST00000246190 WDR62O43379 1518 aa34.01■■■■□ 3.04
NECAB3-201ENST00000246190 POLA1P09884 1462 aaPredicted RBP33.96■■■■□ 3.03
NECAB3-201ENST00000246190 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
NECAB3-201ENST00000246190 SOGA1O94964 1423 aa33.85■■■■□ 3.01
NECAB3-201ENST00000246190 CUX2O14529 1486 aa33.82■■■■□ 3
NECAB3-201ENST00000246190 FAM9AQ8IZU1 332 aaPredicted RBP33.82■■■■□ 3
NECAB3-201ENST00000246190 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
NECAB3-201ENST00000246190 TARBP1Q13395 1621 aaKnown RBP33.71■■■□□ 2.99
NECAB3-201ENST00000246190 ABCA10Q8WWZ4 1543 aa33.67■■■□□ 2.98
NECAB3-201ENST00000246190 IFT140Q96RY7 1462 aa33.64■■■□□ 2.98
NECAB3-201ENST00000246190 TDRD9Q8NDG6 1382 aaKnown RBP33.64■■■□□ 2.98
NECAB3-201ENST00000246190 WDR97A6NE52 1622 aa33.63■■■□□ 2.97
NECAB3-201ENST00000246190 ZNF608Q9ULD9 1512 aaPredicted RBP33.59■■■□□ 2.97
NECAB3-201ENST00000246190 KIF27Q86VH2 1401 aa33.58■■■□□ 2.97
NECAB3-201ENST00000246190 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.962e-7■■■■■ 29.3
NECAB3-201ENST00000246190 CSRNP3Q8WYN3 585 aa33.47■■■□□ 2.95
NECAB3-201ENST00000246190 EEA1Q15075 1411 aa33.47■■■□□ 2.95
NECAB3-201ENST00000246190 ABCA5Q8WWZ7 1642 aa33.46■■■□□ 2.95
NECAB3-201ENST00000246190 EHMT2Q96KQ7 1210 aa33.46■■■□□ 2.95
NECAB3-201ENST00000246190 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
NECAB3-201ENST00000246190 EIF4G3O43432 1585 aaKnown RBP33.41■■■□□ 2.94
NECAB3-201ENST00000246190 IGF1RP08069 1367 aa33.4■■■□□ 2.94
NECAB3-201ENST00000246190 LOC105371045A0A1W2PR82 267 aa33.34■■■□□ 2.93
NECAB3-201ENST00000246190 PBRM1Q86U86 1689 aa33.31■■■□□ 2.92
NECAB3-201ENST00000246190 GRIN2BQ13224 1484 aa33.26■■■□□ 2.92
NECAB3-201ENST00000246190 ERICH3Q5RHP9 1530 aa33.25■■■□□ 2.91
NECAB3-201ENST00000246190 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.91
NECAB3-201ENST00000246190 PRXQ9BXM0 1461 aa33.19■■■□□ 2.9
NECAB3-201ENST00000246190 SNAPC4Q5SXM2 1469 aa33.17■■■□□ 2.9
NECAB3-201ENST00000246190 RAPGEF2Q9Y4G8 1499 aa33.16■■■□□ 2.9
NECAB3-201ENST00000246190 KIF21BO75037 1637 aa33.12■■■□□ 2.89
NECAB3-201ENST00000246190 CUL7Q14999 1698 aa33.12■■■□□ 2.89
NECAB3-201ENST00000246190 ADAMTS12P58397 1594 aa33.08■■■□□ 2.89
NECAB3-201ENST00000246190 GOLGA3Q08378 1498 aa33.05■■■□□ 2.88
NECAB3-201ENST00000246190 FHAD1B1AJZ9 1412 aa33.05■■■□□ 2.88
NECAB3-201ENST00000246190 MAGI1Q96QZ7 1491 aaPredicted RBP33.03■■■□□ 2.88
NECAB3-201ENST00000246190 UBTFP17480 764 aaKnown RBP33.03■■■□□ 2.88
NECAB3-201ENST00000246190 FBLN2P98095 1184 aa33.01■■■□□ 2.87
NECAB3-201ENST00000246190 CHMP7Q8WUX9 453 aaPredicted RBP32.95■■■□□ 2.87
NECAB3-201ENST00000246190 SYNJ2O15056 1496 aa32.94■■■□□ 2.86
NECAB3-201ENST00000246190 GRIN2AQ12879 1464 aa32.87■■■□□ 2.85
NECAB3-201ENST00000246190 CHD1O14646 1710 aa32.83■■■□□ 2.85
NECAB3-201ENST00000246190 TNIKQ9UKE5 1360 aa32.82■■■□□ 2.84
NECAB3-201ENST00000246190 RANGAP1P46060 587 aaPredicted RBP32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms