RNA–Protein interactions for RNA: ENST00000564304.5

ATXN2L-215, Transcript of ataxin 2 like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2L, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2L-215ENST00000564304 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
ATXN2L-215ENST00000564304 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
ATXN2L-215ENST00000564304 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
ATXN2L-215ENST00000564304 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
ATXN2L-215ENST00000564304 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
ATXN2L-215ENST00000564304 PPARGC1BQ86YN6 1023 aaKnown RBP23.02■■□□□ 1.28
ATXN2L-215ENST00000564304 HRCP23327 699 aa22.77■■□□□ 1.24
ATXN2L-215ENST00000564304 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
ATXN2L-215ENST00000564304 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
ATXN2L-215ENST00000564304 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
ATXN2L-215ENST00000564304 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
ATXN2L-215ENST00000564304 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
ATXN2L-215ENST00000564304 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
ATXN2L-215ENST00000564304 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.09
ATXN2L-215ENST00000564304 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
ATXN2L-215ENST00000564304 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
ATXN2L-215ENST00000564304 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
ATXN2L-215ENST00000564304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
ATXN2L-215ENST00000564304 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
ATXN2L-215ENST00000564304 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
ATXN2L-215ENST00000564304 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1.01
ATXN2L-215ENST00000564304 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
ATXN2L-215ENST00000564304 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
ATXN2L-215ENST00000564304 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
ATXN2L-215ENST00000564304 MYT1Q01538 1121 aa21.24■□□□□ 0.99
ATXN2L-215ENST00000564304 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
ATXN2L-215ENST00000564304 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
ATXN2L-215ENST00000564304 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
ATXN2L-215ENST00000564304 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
ATXN2L-215ENST00000564304 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
ATXN2L-215ENST00000564304 CCDC180Q9P1Z9 1646 aa20.87■□□□□ 0.93
ATXN2L-215ENST00000564304 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
ATXN2L-215ENST00000564304 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
ATXN2L-215ENST00000564304 MIER1Q8N108 512 aa20.57■□□□□ 0.88
ATXN2L-215ENST00000564304 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
ATXN2L-215ENST00000564304 SCRIBQ14160 1630 aa20.52■□□□□ 0.88
ATXN2L-215ENST00000564304 ZNF316A6NFI3 1004 aaPredicted RBP20.5■□□□□ 0.87
ATXN2L-215ENST00000564304 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
ATXN2L-215ENST00000564304 BCANQ96GW7 911 aa20.39■□□□□ 0.85
ATXN2L-215ENST00000564304 ITGAEP38570 1179 aa20.32■□□□□ 0.84
ATXN2L-215ENST00000564304 APLP2Q06481 763 aa20.31■□□□□ 0.84
ATXN2L-215ENST00000564304 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
ATXN2L-215ENST00000564304 ABCC9O60706 1549 aa20.17■□□□□ 0.82
ATXN2L-215ENST00000564304 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
ATXN2L-215ENST00000564304 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
ATXN2L-215ENST00000564304 CSRNP3Q8WYN3 585 aa20.1■□□□□ 0.81
ATXN2L-215ENST00000564304 SOGA1O94964 1423 aa20.07■□□□□ 0.8
ATXN2L-215ENST00000564304 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
ATXN2L-215ENST00000564304 PRKCSHP14314 528 aaPredicted RBP20.03■□□□□ 0.8
ATXN2L-215ENST00000564304 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.79
ATXN2L-215ENST00000564304 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
ATXN2L-215ENST00000564304 KCNH8Q96L42 1107 aa20■□□□□ 0.79
ATXN2L-215ENST00000564304 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
ATXN2L-215ENST00000564304 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.792e-7■□□□□ 10.1
ATXN2L-215ENST00000564304 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
ATXN2L-215ENST00000564304 ANP32EQ9BTT0 268 aa19.96■□□□□ 0.79
ATXN2L-215ENST00000564304 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
ATXN2L-215ENST00000564304 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
ATXN2L-215ENST00000564304 WIZO95785 1651 aa19.9■□□□□ 0.78
ATXN2L-215ENST00000564304 FKBP8Q14318 412 aa19.86■□□□□ 0.77
ATXN2L-215ENST00000564304 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
ATXN2L-215ENST00000564304 TSHZ2Q9NRE2 1034 aa19.81■□□□□ 0.76
ATXN2L-215ENST00000564304 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
ATXN2L-215ENST00000564304 CNGB1Q14028 1251 aaPredicted RBP19.77■□□□□ 0.76
ATXN2L-215ENST00000564304 IRX6P78412 446 aaPredicted RBP19.74■□□□□ 0.75
ATXN2L-215ENST00000564304 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
ATXN2L-215ENST00000564304 NEFLP07196 543 aa19.7■□□□□ 0.74
ATXN2L-215ENST00000564304 CLIP1P30622 1438 aa19.68■□□□□ 0.74
ATXN2L-215ENST00000564304 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
ATXN2L-215ENST00000564304 FAM50AQ14320 339 aaKnown RBP19.61■□□□□ 0.73
ATXN2L-215ENST00000564304 SIN3AQ96ST3 1273 aa19.59■□□□□ 0.73
ATXN2L-215ENST00000564304 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
ATXN2L-215ENST00000564304 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
ATXN2L-215ENST00000564304 P3H3Q8IVL6 736 aa19.58■□□□□ 0.72
ATXN2L-215ENST00000564304 SENP3-EIF4A1A0A087X0R7 540 aa19.57■□□□□ 0.72
ATXN2L-215ENST00000564304 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
ATXN2L-215ENST00000564304 RBM19Q9Y4C8 960 aaKnown RBP19.46■□□□□ 0.71
ATXN2L-215ENST00000564304 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
ATXN2L-215ENST00000564304 CLSPNQ9HAW4 1339 aa19.41■□□□□ 0.7
ATXN2L-215ENST00000564304 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.7
ATXN2L-215ENST00000564304 ANP32CO43423 234 aa19.37■□□□□ 0.69
ATXN2L-215ENST00000564304 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
ATXN2L-215ENST00000564304 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.69
ATXN2L-215ENST00000564304 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
ATXN2L-215ENST00000564304 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
ATXN2L-215ENST00000564304 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
ATXN2L-215ENST00000564304 NBR1Q14596 966 aa19.29■□□□□ 0.68
ATXN2L-215ENST00000564304 EEA1Q15075 1411 aa19.26■□□□□ 0.67
ATXN2L-215ENST00000564304 SMARCA2P51531 1590 aa19.22■□□□□ 0.67
ATXN2L-215ENST00000564304 CDK11AQ9UQ88 783 aaPredicted RBP19.22■□□□□ 0.67
ATXN2L-215ENST00000564304 ARID3CA6NKF2 412 aa19.21■□□□□ 0.67
ATXN2L-215ENST00000564304 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
ATXN2L-215ENST00000564304 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
ATXN2L-215ENST00000564304 TOP2AP11388 1531 aaKnown RBP19.19■□□□□ 0.66
ATXN2L-215ENST00000564304 MSH5O43196 834 aa19.19■□□□□ 0.66
ATXN2L-215ENST00000564304 B4GALNT3Q6L9W6 998 aa19.16■□□□□ 0.66
ATXN2L-215ENST00000564304 NACADO15069 1562 aa19.16■□□□□ 0.66
ATXN2L-215ENST00000564304 CCNB3Q8WWL7 1395 aa19.16■□□□□ 0.66
ATXN2L-215ENST00000564304 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
ATXN2L-215ENST00000564304 KIF21BO75037 1637 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms