RNA–Protein interactions for RNA: ENST00000564793.1

CFDP1-204, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-204ENST00000564793 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
CFDP1-204ENST00000564793 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
CFDP1-204ENST00000564793 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
CFDP1-204ENST00000564793 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
CFDP1-204ENST00000564793 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
CFDP1-204ENST00000564793 FOXD1Q16676 465 aa16.27■□□□□ 0.2
CFDP1-204ENST00000564793 ADRA2BP18089 450 aa15.89■□□□□ 0.13
CFDP1-204ENST00000564793 PPP6R1Q9UPN7 881 aa15.87■□□□□ 0.13
CFDP1-204ENST00000564793 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
CFDP1-204ENST00000564793 MSH5O43196 834 aa14.86□□□□□ -0.03
CFDP1-204ENST00000564793 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
CFDP1-204ENST00000564793 KCNA4P22459 653 aa14.82□□□□□ -0.04
CFDP1-204ENST00000564793 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
CFDP1-204ENST00000564793 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
CFDP1-204ENST00000564793 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
CFDP1-204ENST00000564793 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
CFDP1-204ENST00000564793 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
CFDP1-204ENST00000564793 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
CFDP1-204ENST00000564793 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
CFDP1-204ENST00000564793 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
CFDP1-204ENST00000564793 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
CFDP1-204ENST00000564793 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
CFDP1-204ENST00000564793 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
CFDP1-204ENST00000564793 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
CFDP1-204ENST00000564793 ZBTB22O15209 634 aa13.65□□□□□ -0.22
CFDP1-204ENST00000564793 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
CFDP1-204ENST00000564793 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
CFDP1-204ENST00000564793 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
CFDP1-204ENST00000564793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.291e-7■□□□□ 8.2
CFDP1-204ENST00000564793 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
CFDP1-204ENST00000564793 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
CFDP1-204ENST00000564793 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
CFDP1-204ENST00000564793 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
CFDP1-204ENST00000564793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
CFDP1-204ENST00000564793 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
CFDP1-204ENST00000564793 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
CFDP1-204ENST00000564793 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
CFDP1-204ENST00000564793 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
CFDP1-204ENST00000564793 APLP2Q06481 763 aa12.73□□□□□ -0.37
CFDP1-204ENST00000564793 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
CFDP1-204ENST00000564793 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
CFDP1-204ENST00000564793 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
CFDP1-204ENST00000564793 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
CFDP1-204ENST00000564793 CAPN15O75808 1086 aa12.55□□□□□ -0.4
CFDP1-204ENST00000564793 NISCHQ9Y2I1 1504 aa12.54□□□□□ -0.4
CFDP1-204ENST00000564793 FKBP8Q14318 412 aa12.46□□□□□ -0.41
CFDP1-204ENST00000564793 POLA2Q14181 598 aa12.4□□□□□ -0.42
CFDP1-204ENST00000564793 ABCB7O75027 752 aa12.36□□□□□ -0.43
CFDP1-204ENST00000564793 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
CFDP1-204ENST00000564793 FBLN2P98095 1184 aa12.27□□□□□ -0.45
CFDP1-204ENST00000564793 DSG3P32926 999 aa12.26□□□□□ -0.45
CFDP1-204ENST00000564793 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
CFDP1-204ENST00000564793 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
CFDP1-204ENST00000564793 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
CFDP1-204ENST00000564793 OSCARQ8IYS5 282 aa12□□□□□ -0.49
CFDP1-204ENST00000564793 PROM2Q8N271 834 aa11.98□□□□□ -0.49
CFDP1-204ENST00000564793 SPDYE2BA6NHP3 402 aa11.9□□□□□ -0.5
CFDP1-204ENST00000564793 SPDYE6P0CI01 402 aa11.9□□□□□ -0.5
CFDP1-204ENST00000564793 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
CFDP1-204ENST00000564793 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
CFDP1-204ENST00000564793 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
CFDP1-204ENST00000564793 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
CFDP1-204ENST00000564793 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
CFDP1-204ENST00000564793 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
CFDP1-204ENST00000564793 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
CFDP1-204ENST00000564793 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
CFDP1-204ENST00000564793 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
CFDP1-204ENST00000564793 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
CFDP1-204ENST00000564793 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
CFDP1-204ENST00000564793 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
CFDP1-204ENST00000564793 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
CFDP1-204ENST00000564793 MIER1Q8N108 512 aa11.49□□□□□ -0.57
CFDP1-204ENST00000564793 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
CFDP1-204ENST00000564793 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
CFDP1-204ENST00000564793 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
CFDP1-204ENST00000564793 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
CFDP1-204ENST00000564793 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
CFDP1-204ENST00000564793 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
CFDP1-204ENST00000564793 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
CFDP1-204ENST00000564793 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
CFDP1-204ENST00000564793 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
CFDP1-204ENST00000564793 PKD2Q13563 968 aa11.33□□□□□ -0.6
CFDP1-204ENST00000564793 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
CFDP1-204ENST00000564793 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
CFDP1-204ENST00000564793 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
CFDP1-204ENST00000564793 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
CFDP1-204ENST00000564793 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.61
CFDP1-204ENST00000564793 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
CFDP1-204ENST00000564793 NUBP1P53384 320 aa11.18□□□□□ -0.62
CFDP1-204ENST00000564793 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
CFDP1-204ENST00000564793 RGL2O15211 777 aa11.11□□□□□ -0.63
CFDP1-204ENST00000564793 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
CFDP1-204ENST00000564793 GSE1Q14687 1217 aa11.11□□□□□ -0.63
CFDP1-204ENST00000564793 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
CFDP1-204ENST00000564793 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
CFDP1-204ENST00000564793 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
CFDP1-204ENST00000564793 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
CFDP1-204ENST00000564793 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
CFDP1-204ENST00000564793 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
CFDP1-204ENST00000564793 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms