Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 VENTXP5-201ENST00000523979 775 ntBASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 HYMAI.1-201ENST00000620949 238 ntBASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 AC026691.1-201ENST00000602502 2017 ntBASIC15.84■□□□□ 0.13
PTCHD4Q6ZW05 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTCHD4Q6ZW05 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 RNF152P1-201ENST00000397754 604 ntBASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 AC112907.2-201ENST00000448639 330 ntBASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 GPR32P1-201ENST00000601788 811 ntBASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTCHD4Q6ZW05 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 SLC25A1P3-201ENST00000395415 828 ntBASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AC211429.1-201ENST00000415277 523 ntBASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 MTCL1P1-201ENST00000446207 792 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms