RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
HLA-A-203ENST00000376809 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
HLA-A-203ENST00000376809 ABCC9O60706 1549 aa35.55■■■■□ 3.28
HLA-A-203ENST00000376809 ZCCHC6Q5VYS8 1495 aaKnown RBP35.11■■■■□ 3.21
HLA-A-203ENST00000376809 DCAF8L2P0C7V8 631 aa34.85■■■■□ 3.17
HLA-A-203ENST00000376809 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
HLA-A-203ENST00000376809 NACADO15069 1562 aa34.57■■■■□ 3.12
HLA-A-203ENST00000376809 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
HLA-A-203ENST00000376809 RB1CC1Q8TDY2 1594 aa34.46■■■■□ 3.11
HLA-A-203ENST00000376809 SCRIBQ14160 1630 aa33.89■■■■□ 3.02
HLA-A-203ENST00000376809 UNC13AQ9UPW8 1703 aa33.8■■■■□ 3
HLA-A-203ENST00000376809 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
HLA-A-203ENST00000376809 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
HLA-A-203ENST00000376809 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
HLA-A-203ENST00000376809 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.82
HLA-A-203ENST00000376809 EIF4G1Q04637 1599 aaKnown RBP32.47■■■□□ 2.79
HLA-A-203ENST00000376809 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
HLA-A-203ENST00000376809 SMARCA4P51532 1647 aa32.43■■■□□ 2.78
HLA-A-203ENST00000376809 MROH2BQ7Z745 1585 aa32.39■■■□□ 2.78
HLA-A-203ENST00000376809 RSF1Q96T23 1441 aaPredicted RBP32.24■■■□□ 2.75
HLA-A-203ENST00000376809 CC2D2AQ9P2K1 1620 aa32.18■■■□□ 2.74
HLA-A-203ENST00000376809 WIZO95785 1651 aa32.11■■■□□ 2.73
HLA-A-203ENST00000376809 DNAJC5BQ9UF47 199 aa32.08■■■□□ 2.73
HLA-A-203ENST00000376809 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
HLA-A-203ENST00000376809 PEG3Q9GZU2 1588 aa32.04■■■□□ 2.72
HLA-A-203ENST00000376809 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
HLA-A-203ENST00000376809 SMARCA2P51531 1590 aa32.03■■■□□ 2.72
HLA-A-203ENST00000376809 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
HLA-A-203ENST00000376809 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
HLA-A-203ENST00000376809 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
HLA-A-203ENST00000376809 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
HLA-A-203ENST00000376809 CCDC88BA6NC98 1476 aa31.38■■■□□ 2.61
HLA-A-203ENST00000376809 CADPSQ9ULU8 1353 aa31■■■□□ 2.55
HLA-A-203ENST00000376809 NESP48681 1621 aa30.99■■■□□ 2.55
HLA-A-203ENST00000376809 CFTRP13569 1480 aa30.97■■■□□ 2.55
HLA-A-203ENST00000376809 LAMC3Q9Y6N6 1575 aa30.95■■■□□ 2.55
HLA-A-203ENST00000376809 PRDM2Q13029 1718 aa30.89■■■□□ 2.54
HLA-A-203ENST00000376809 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.51
HLA-A-203ENST00000376809 FANCD2Q9BXW9 1451 aa30.68■■■□□ 2.5
HLA-A-203ENST00000376809 KIF21AQ7Z4S6 1674 aa30.67■■■□□ 2.5
HLA-A-203ENST00000376809 ERCC6Q03468 1493 aa30.6■■■□□ 2.49
HLA-A-203ENST00000376809 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.49
HLA-A-203ENST00000376809 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
HLA-A-203ENST00000376809 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
HLA-A-203ENST00000376809 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
HLA-A-203ENST00000376809 URB2Q14146 1524 aaKnown RBP30.34■■■□□ 2.45
HLA-A-203ENST00000376809 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
HLA-A-203ENST00000376809 CUX1P39880 1505 aa30.33■■■□□ 2.45
HLA-A-203ENST00000376809 SYNJ1O43426 1573 aa30.32■■■□□ 2.44
HLA-A-203ENST00000376809 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
HLA-A-203ENST00000376809 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
HLA-A-203ENST00000376809 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
HLA-A-203ENST00000376809 TOP2BQ02880 1626 aa30.26■■■□□ 2.43
HLA-A-203ENST00000376809 BIVM-ERCC5R4GMW8 1640 aa30.26■■■□□ 2.43
HLA-A-203ENST00000376809 WDR62O43379 1518 aa30.24■■■□□ 2.43
HLA-A-203ENST00000376809 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
HLA-A-203ENST00000376809 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
HLA-A-203ENST00000376809 CUX2O14529 1486 aa30.11■■■□□ 2.41
HLA-A-203ENST00000376809 POLA1P09884 1462 aaPredicted RBP30.07■■■□□ 2.4
HLA-A-203ENST00000376809 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
HLA-A-203ENST00000376809 SOGA1O94964 1423 aa29.95■■■□□ 2.38
HLA-A-203ENST00000376809 TARBP1Q13395 1621 aaKnown RBP29.89■■■□□ 2.38
HLA-A-203ENST00000376809 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
HLA-A-203ENST00000376809 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
HLA-A-203ENST00000376809 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
HLA-A-203ENST00000376809 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
HLA-A-203ENST00000376809 TDRD9Q8NDG6 1382 aaKnown RBP29.72■■■□□ 2.35
HLA-A-203ENST00000376809 RUSC2Q8N2Y8 1516 aa29.7■■■□□ 2.35
HLA-A-203ENST00000376809 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
HLA-A-203ENST00000376809 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
HLA-A-203ENST00000376809 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
HLA-A-203ENST00000376809 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.34
HLA-A-203ENST00000376809 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
HLA-A-203ENST00000376809 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
HLA-A-203ENST00000376809 PBRM1Q86U86 1689 aa29.58■■■□□ 2.33
HLA-A-203ENST00000376809 EEA1Q15075 1411 aa29.57■■■□□ 2.32
HLA-A-203ENST00000376809 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
HLA-A-203ENST00000376809 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
HLA-A-203ENST00000376809 IGF1RP08069 1367 aa29.46■■■□□ 2.31
HLA-A-203ENST00000376809 CSRNP3Q8WYN3 585 aa29.45■■■□□ 2.31
HLA-A-203ENST00000376809 SNAPC4Q5SXM2 1469 aa29.4■■■□□ 2.3
HLA-A-203ENST00000376809 CUL7Q14999 1698 aa29.38■■■□□ 2.29
HLA-A-203ENST00000376809 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
HLA-A-203ENST00000376809 MAGI1Q96QZ7 1491 aaPredicted RBP29.34■■■□□ 2.29
HLA-A-203ENST00000376809 CARMIL1Q5VZK9 1371 aa29.32■■■□□ 2.28
HLA-A-203ENST00000376809 PRXQ9BXM0 1461 aa29.29■■■□□ 2.28
HLA-A-203ENST00000376809 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
HLA-A-203ENST00000376809 KIF21BO75037 1637 aa29.26■■■□□ 2.27
HLA-A-203ENST00000376809 EHMT2Q96KQ7 1210 aa29.25■■■□□ 2.27
HLA-A-203ENST00000376809 SYNJ2O15056 1496 aa29.22■■■□□ 2.27
HLA-A-203ENST00000376809 RAPGEF2Q9Y4G8 1499 aa29.22■■■□□ 2.27
HLA-A-203ENST00000376809 CHD1O14646 1710 aa29.19■■■□□ 2.26
HLA-A-203ENST00000376809 FBLN2P98095 1184 aa29.19■■■□□ 2.26
HLA-A-203ENST00000376809 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
HLA-A-203ENST00000376809 GOLGA3Q08378 1498 aa29.14■■■□□ 2.26
HLA-A-203ENST00000376809 GRIN2AQ12879 1464 aa29.14■■■□□ 2.25
HLA-A-203ENST00000376809 LOC105371045A0A1W2PR82 267 aa29.11■■■□□ 2.25
HLA-A-203ENST00000376809 UBTFP17480 764 aaKnown RBP29.04■■■□□ 2.24
HLA-A-203ENST00000376809 CEP170Q5SW79 1584 aa29■■■□□ 2.23
HLA-A-203ENST00000376809 CTTNBP2Q8WZ74 1663 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms