RNA–Protein interactions for RNA: ENST00000376687.3

SUV39H1-202, Transcript of suppressor of variegation 3-9 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUV39H1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUV39H1-202ENST00000376687 NISCHQ9Y2I1 1504 aa33.76■■■□□ 2.99
SUV39H1-202ENST00000376687 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.34
SUV39H1-202ENST00000376687 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
SUV39H1-202ENST00000376687 DCAF8L2P0C7V8 631 aa28.95■■■□□ 2.23
SUV39H1-202ENST00000376687 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
SUV39H1-202ENST00000376687 CCDC180Q9P1Z9 1646 aa28.23■■■□□ 2.11
SUV39H1-202ENST00000376687 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
SUV39H1-202ENST00000376687 MYO15BQ96JP2 1530 aa27.89■■■□□ 2.05
SUV39H1-202ENST00000376687 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
SUV39H1-202ENST00000376687 PCGF6Q9BYE7 350 aa27.48■■□□□ 1.99
SUV39H1-202ENST00000376687 HRCP23327 699 aa27.41■■□□□ 1.98
SUV39H1-202ENST00000376687 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
SUV39H1-202ENST00000376687 PPARGC1BQ86YN6 1023 aaKnown RBP27.24■■□□□ 1.95
SUV39H1-202ENST00000376687 EHMT2Q96KQ7 1210 aa27.11■■□□□ 1.93
SUV39H1-202ENST00000376687 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
SUV39H1-202ENST00000376687 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
SUV39H1-202ENST00000376687 ABCC9O60706 1549 aa26.94■■□□□ 1.9
SUV39H1-202ENST00000376687 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
SUV39H1-202ENST00000376687 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
SUV39H1-202ENST00000376687 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.86
SUV39H1-202ENST00000376687 RB1CC1Q8TDY2 1594 aa26.62■■□□□ 1.85
SUV39H1-202ENST00000376687 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
SUV39H1-202ENST00000376687 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
SUV39H1-202ENST00000376687 NACADO15069 1562 aa26.29■■□□□ 1.8
SUV39H1-202ENST00000376687 WIZO95785 1651 aa26.26■■□□□ 1.79
SUV39H1-202ENST00000376687 TTBK1Q5TCY1 1321 aaPredicted RBP26.16■■□□□ 1.78
SUV39H1-202ENST00000376687 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.76
SUV39H1-202ENST00000376687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
SUV39H1-202ENST00000376687 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
SUV39H1-202ENST00000376687 ZEB1P37275 1124 aaPredicted RBP25.84■■□□□ 1.73
SUV39H1-202ENST00000376687 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
SUV39H1-202ENST00000376687 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
SUV39H1-202ENST00000376687 SOGA1O94964 1423 aa25.7■■□□□ 1.7
SUV39H1-202ENST00000376687 UBTFP17480 764 aaKnown RBP25.7■■□□□ 1.7
SUV39H1-202ENST00000376687 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
SUV39H1-202ENST00000376687 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
SUV39H1-202ENST00000376687 SMARCA4P51532 1647 aa25.64■■□□□ 1.69
SUV39H1-202ENST00000376687 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
SUV39H1-202ENST00000376687 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
SUV39H1-202ENST00000376687 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
SUV39H1-202ENST00000376687 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.69
SUV39H1-202ENST00000376687 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
SUV39H1-202ENST00000376687 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
SUV39H1-202ENST00000376687 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
SUV39H1-202ENST00000376687 CEP162Q5TB80 1403 aa25.48■■□□□ 1.67
SUV39H1-202ENST00000376687 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
SUV39H1-202ENST00000376687 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
SUV39H1-202ENST00000376687 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
SUV39H1-202ENST00000376687 HNRNPUL2Q1KMD3 747 aaKnown RBP25.28■■□□□ 1.64
SUV39H1-202ENST00000376687 NEUROD1Q13562 356 aa25.24■■□□□ 1.63
SUV39H1-202ENST00000376687 DIEXFQ68CQ4 756 aaKnown RBP25.16■■□□□ 1.62
SUV39H1-202ENST00000376687 GOLGA3Q08378 1498 aa25.12■■□□□ 1.61
SUV39H1-202ENST00000376687 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
SUV39H1-202ENST00000376687 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
SUV39H1-202ENST00000376687 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
SUV39H1-202ENST00000376687 EEA1Q15075 1411 aa25.09■■□□□ 1.61
SUV39H1-202ENST00000376687 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.61
SUV39H1-202ENST00000376687 APLP2Q06481 763 aa25.01■■□□□ 1.59
SUV39H1-202ENST00000376687 CLIP1P30622 1438 aa25.01■■□□□ 1.59
SUV39H1-202ENST00000376687 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
SUV39H1-202ENST00000376687 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
SUV39H1-202ENST00000376687 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
SUV39H1-202ENST00000376687 PELP1Q8IZL8 1130 aaKnown RBP24.9■■□□□ 1.58
SUV39H1-202ENST00000376687 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
SUV39H1-202ENST00000376687 YTHDC1Q96MU7 727 aaKnown RBP24.89■■□□□ 1.58
SUV39H1-202ENST00000376687 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
SUV39H1-202ENST00000376687 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
SUV39H1-202ENST00000376687 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
SUV39H1-202ENST00000376687 KANK4Q5T7N3 995 aaPredicted RBP24.75■■□□□ 1.55
SUV39H1-202ENST00000376687 KIF21BO75037 1637 aa24.72■■□□□ 1.55
SUV39H1-202ENST00000376687 ITGAEP38570 1179 aa24.71■■□□□ 1.55
SUV39H1-202ENST00000376687 MIER1Q8N108 512 aa24.7■■□□□ 1.54
SUV39H1-202ENST00000376687 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
SUV39H1-202ENST00000376687 CUX1P39880 1505 aa24.54■■□□□ 1.52
SUV39H1-202ENST00000376687 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
SUV39H1-202ENST00000376687 PRXQ9BXM0 1461 aa24.5■■□□□ 1.51
SUV39H1-202ENST00000376687 P3H3Q8IVL6 736 aa24.49■■□□□ 1.51
SUV39H1-202ENST00000376687 ATP1B4Q9UN42 357 aaPredicted RBP24.48■■□□□ 1.51
SUV39H1-202ENST00000376687 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
SUV39H1-202ENST00000376687 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
SUV39H1-202ENST00000376687 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
SUV39H1-202ENST00000376687 DHX57Q6P158 1386 aaKnown RBP24.37■■□□□ 1.49
SUV39H1-202ENST00000376687 CFTRP13569 1480 aa24.35■■□□□ 1.49
SUV39H1-202ENST00000376687 CUX2O14529 1486 aa24.35■■□□□ 1.49
SUV39H1-202ENST00000376687 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
SUV39H1-202ENST00000376687 IGF1RP08069 1367 aa24.3■■□□□ 1.48
SUV39H1-202ENST00000376687 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
SUV39H1-202ENST00000376687 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
SUV39H1-202ENST00000376687 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
SUV39H1-202ENST00000376687 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
SUV39H1-202ENST00000376687 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
SUV39H1-202ENST00000376687 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.47
SUV39H1-202ENST00000376687 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
SUV39H1-202ENST00000376687 RRBP1Q9P2E9 1410 aaKnown RBP24.13■■□□□ 1.45
SUV39H1-202ENST00000376687 SIN3AQ96ST3 1273 aa24.13■■□□□ 1.45
SUV39H1-202ENST00000376687 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
SUV39H1-202ENST00000376687 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
SUV39H1-202ENST00000376687 HIRIP3Q9BW71 556 aaPredicted RBP24.08■■□□□ 1.44
SUV39H1-202ENST00000376687 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
SUV39H1-202ENST00000376687 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms