RNA–Protein interactions for RNA: ENST00000373760.6

SLC4A3-204, Transcript of solute carrier family 4 member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC4A3, Length 4,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-204ENST00000373760 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
SLC4A3-204ENST00000373760 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
SLC4A3-204ENST00000373760 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
SLC4A3-204ENST00000373760 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
SLC4A3-204ENST00000373760 CCDC180Q9P1Z9 1646 aa27.07■■□□□ 1.92
SLC4A3-204ENST00000373760 HRCP23327 699 aa27.06■■□□□ 1.92
SLC4A3-204ENST00000373760 ZCCHC6Q5VYS8 1495 aaKnown RBP26.99■■□□□ 1.91
SLC4A3-204ENST00000373760 PCGF6Q9BYE7 350 aa26.93■■□□□ 1.9
SLC4A3-204ENST00000373760 PPARGC1BQ86YN6 1023 aaKnown RBP26.73■■□□□ 1.87
SLC4A3-204ENST00000373760 ABCC9O60706 1549 aa26.68■■□□□ 1.86
SLC4A3-204ENST00000373760 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
SLC4A3-204ENST00000373760 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
SLC4A3-204ENST00000373760 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
SLC4A3-204ENST00000373760 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
SLC4A3-204ENST00000373760 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
SLC4A3-204ENST00000373760 TRIM41Q8WV44 630 aa26.06■■□□□ 1.76
SLC4A3-204ENST00000373760 DCAF1Q9Y4B6 1507 aa25.97■■□□□ 1.75
SLC4A3-204ENST00000373760 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
SLC4A3-204ENST00000373760 PABPN1Q86U42 306 aaKnown RBP eCLIP25.84■■□□□ 1.73
SLC4A3-204ENST00000373760 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
SLC4A3-204ENST00000373760 TRIM26Q12899 539 aaPredicted RBP25.73■■□□□ 1.71
SLC4A3-204ENST00000373760 ZEB1P37275 1124 aaPredicted RBP25.68■■□□□ 1.7
SLC4A3-204ENST00000373760 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
SLC4A3-204ENST00000373760 MYT1Q01538 1121 aa25.59■■□□□ 1.69
SLC4A3-204ENST00000373760 NACADO15069 1562 aa25.57■■□□□ 1.68
SLC4A3-204ENST00000373760 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
SLC4A3-204ENST00000373760 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.66
SLC4A3-204ENST00000373760 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
SLC4A3-204ENST00000373760 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
SLC4A3-204ENST00000373760 CENPBP07199 599 aaPredicted RBP25.26■■□□□ 1.63
SLC4A3-204ENST00000373760 UBTFP17480 764 aaKnown RBP25.2■■□□□ 1.62
SLC4A3-204ENST00000373760 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
SLC4A3-204ENST00000373760 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
SLC4A3-204ENST00000373760 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.61
SLC4A3-204ENST00000373760 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
SLC4A3-204ENST00000373760 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
SLC4A3-204ENST00000373760 NEUROD1Q13562 356 aa25.05■■□□□ 1.6
SLC4A3-204ENST00000373760 YTHDC1Q96MU7 727 aaKnown RBP24.93■■□□□ 1.58
SLC4A3-204ENST00000373760 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
SLC4A3-204ENST00000373760 APLP2Q06481 763 aa24.91■■□□□ 1.58
SLC4A3-204ENST00000373760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.88■■□□□ 1.57
SLC4A3-204ENST00000373760 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
SLC4A3-204ENST00000373760 WIZO95785 1651 aa24.83■■□□□ 1.57
SLC4A3-204ENST00000373760 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
SLC4A3-204ENST00000373760 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
SLC4A3-204ENST00000373760 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
SLC4A3-204ENST00000373760 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
SLC4A3-204ENST00000373760 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
SLC4A3-204ENST00000373760 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
SLC4A3-204ENST00000373760 ABCC8Q09428 1581 aa24.45■■□□□ 1.51
SLC4A3-204ENST00000373760 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
SLC4A3-204ENST00000373760 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
SLC4A3-204ENST00000373760 SOGA1O94964 1423 aa24.31■■□□□ 1.48
SLC4A3-204ENST00000373760 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
SLC4A3-204ENST00000373760 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
SLC4A3-204ENST00000373760 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
SLC4A3-204ENST00000373760 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
SLC4A3-204ENST00000373760 ITGAEP38570 1179 aa24.14■■□□□ 1.45
SLC4A3-204ENST00000373760 EEA1Q15075 1411 aa24.13■■□□□ 1.45
SLC4A3-204ENST00000373760 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
SLC4A3-204ENST00000373760 UNC13AQ9UPW8 1703 aa24.08■■□□□ 1.45
SLC4A3-204ENST00000373760 MIER1Q8N108 512 aa24.07■■□□□ 1.44
SLC4A3-204ENST00000373760 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
SLC4A3-204ENST00000373760 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
SLC4A3-204ENST00000373760 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
SLC4A3-204ENST00000373760 CLIP1P30622 1438 aa23.99■■□□□ 1.43
SLC4A3-204ENST00000373760 P3H3Q8IVL6 736 aa23.98■■□□□ 1.43
SLC4A3-204ENST00000373760 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
SLC4A3-204ENST00000373760 BCL11AQ9H165 835 aa23.84■■□□□ 1.41
SLC4A3-204ENST00000373760 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
SLC4A3-204ENST00000373760 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
SLC4A3-204ENST00000373760 ANP32EQ9BTT0 268 aa23.8■■□□□ 1.4
SLC4A3-204ENST00000373760 BCANQ96GW7 911 aa23.78■■□□□ 1.4
SLC4A3-204ENST00000373760 FAM50AQ14320 339 aaKnown RBP23.74■■□□□ 1.39
SLC4A3-204ENST00000373760 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
SLC4A3-204ENST00000373760 SUPT16HQ9Y5B9 1047 aaKnown RBP23.68■■□□□ 1.38
SLC4A3-204ENST00000373760 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
SLC4A3-204ENST00000373760 CUX2O14529 1486 aa23.67■■□□□ 1.38
SLC4A3-204ENST00000373760 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
SLC4A3-204ENST00000373760 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
SLC4A3-204ENST00000373760 ERICH6Q7L0X2 663 aa23.6■■□□□ 1.37
SLC4A3-204ENST00000373760 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
SLC4A3-204ENST00000373760 ARID3CA6NKF2 412 aa23.57■■□□□ 1.36
SLC4A3-204ENST00000373760 NEFLP07196 543 aa23.56■■□□□ 1.36
SLC4A3-204ENST00000373760 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
SLC4A3-204ENST00000373760 FBLN2P98095 1184 aa23.55■■□□□ 1.36
SLC4A3-204ENST00000373760 TSHZ2Q9NRE2 1034 aa23.55■■□□□ 1.36
SLC4A3-204ENST00000373760 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
SLC4A3-204ENST00000373760 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
SLC4A3-204ENST00000373760 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
SLC4A3-204ENST00000373760 CFTRP13569 1480 aa23.45■■□□□ 1.34
SLC4A3-204ENST00000373760 KANK4Q5T7N3 995 aaPredicted RBP23.42■■□□□ 1.34
SLC4A3-204ENST00000373760 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
SLC4A3-204ENST00000373760 FKBP8Q14318 412 aa23.4■■□□□ 1.34
SLC4A3-204ENST00000373760 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
SLC4A3-204ENST00000373760 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
SLC4A3-204ENST00000373760 CUX1P39880 1505 aa23.34■■□□□ 1.33
SLC4A3-204ENST00000373760 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
SLC4A3-204ENST00000373760 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
SLC4A3-204ENST00000373760 NESP48681 1621 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms