RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
PRDM5-202ENST00000394435 CCDC180Q9P1Z9 1646 aa29.88■■■□□ 2.37
PRDM5-202ENST00000394435 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
PRDM5-202ENST00000394435 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
PRDM5-202ENST00000394435 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
PRDM5-202ENST00000394435 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
PRDM5-202ENST00000394435 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
PRDM5-202ENST00000394435 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
PRDM5-202ENST00000394435 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
PRDM5-202ENST00000394435 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
PRDM5-202ENST00000394435 ABCC9O60706 1549 aa27.91■■■□□ 2.06
PRDM5-202ENST00000394435 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
PRDM5-202ENST00000394435 NACADO15069 1562 aa27.64■■■□□ 2.02
PRDM5-202ENST00000394435 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
PRDM5-202ENST00000394435 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
PRDM5-202ENST00000394435 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
PRDM5-202ENST00000394435 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
PRDM5-202ENST00000394435 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
PRDM5-202ENST00000394435 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
PRDM5-202ENST00000394435 WIZO95785 1651 aa27.08■■□□□ 1.93
PRDM5-202ENST00000394435 HRCP23327 699 aa27.08■■□□□ 1.93
PRDM5-202ENST00000394435 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
PRDM5-202ENST00000394435 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
PRDM5-202ENST00000394435 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
PRDM5-202ENST00000394435 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
PRDM5-202ENST00000394435 TRIM26Q12899 539 aaPredicted RBP26.71■■□□□ 1.87
PRDM5-202ENST00000394435 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
PRDM5-202ENST00000394435 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
PRDM5-202ENST00000394435 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.85
PRDM5-202ENST00000394435 PPARGC1BQ86YN6 1023 aaKnown RBP26.55■■□□□ 1.84
PRDM5-202ENST00000394435 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
PRDM5-202ENST00000394435 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.84
PRDM5-202ENST00000394435 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
PRDM5-202ENST00000394435 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
PRDM5-202ENST00000394435 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
PRDM5-202ENST00000394435 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
PRDM5-202ENST00000394435 SOGA1O94964 1423 aa26.13■■□□□ 1.77
PRDM5-202ENST00000394435 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
PRDM5-202ENST00000394435 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
PRDM5-202ENST00000394435 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.76
PRDM5-202ENST00000394435 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
PRDM5-202ENST00000394435 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
PRDM5-202ENST00000394435 EEA1Q15075 1411 aa25.97■■□□□ 1.75
PRDM5-202ENST00000394435 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
PRDM5-202ENST00000394435 CEP162Q5TB80 1403 aa25.94■■□□□ 1.74
PRDM5-202ENST00000394435 TNIKQ9UKE5 1360 aa25.91■■□□□ 1.74
PRDM5-202ENST00000394435 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
PRDM5-202ENST00000394435 UBTFP17480 764 aaKnown RBP25.84■■□□□ 1.73
PRDM5-202ENST00000394435 GOLGA3Q08378 1498 aa25.8■■□□□ 1.72
PRDM5-202ENST00000394435 TTBK1Q5TCY1 1321 aaPredicted RBP25.74■■□□□ 1.71
PRDM5-202ENST00000394435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.67■■□□□ 1.7
PRDM5-202ENST00000394435 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
PRDM5-202ENST00000394435 KIF21BO75037 1637 aa25.65■■□□□ 1.7
PRDM5-202ENST00000394435 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
PRDM5-202ENST00000394435 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
PRDM5-202ENST00000394435 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
PRDM5-202ENST00000394435 HMGXB3Q12766 1538 aa25.56■■□□□ 1.68
PRDM5-202ENST00000394435 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
PRDM5-202ENST00000394435 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
PRDM5-202ENST00000394435 CLIP1P30622 1438 aa25.49■■□□□ 1.67
PRDM5-202ENST00000394435 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
PRDM5-202ENST00000394435 VPS8Q8N3P4 1428 aa25.36■■□□□ 1.65
PRDM5-202ENST00000394435 CUX1P39880 1505 aa25.36■■□□□ 1.65
PRDM5-202ENST00000394435 CFTRP13569 1480 aa25.32■■□□□ 1.64
PRDM5-202ENST00000394435 PRXQ9BXM0 1461 aa25.27■■□□□ 1.64
PRDM5-202ENST00000394435 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
PRDM5-202ENST00000394435 APLP2Q06481 763 aa25.23■■□□□ 1.63
PRDM5-202ENST00000394435 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
PRDM5-202ENST00000394435 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
PRDM5-202ENST00000394435 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
PRDM5-202ENST00000394435 ARAP1Q96P48 1450 aa25.11■■□□□ 1.61
PRDM5-202ENST00000394435 CADPSQ9ULU8 1353 aa25.06■■□□□ 1.6
PRDM5-202ENST00000394435 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
PRDM5-202ENST00000394435 DIEXFQ68CQ4 756 aaKnown RBP25■■□□□ 1.59
PRDM5-202ENST00000394435 CUX2O14529 1486 aa24.99■■□□□ 1.59
PRDM5-202ENST00000394435 KANK4Q5T7N3 995 aaPredicted RBP24.94■■□□□ 1.58
PRDM5-202ENST00000394435 IGF1RP08069 1367 aa24.93■■□□□ 1.58
PRDM5-202ENST00000394435 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
PRDM5-202ENST00000394435 ARHGAP35Q9NRY4 1499 aa24.92■■□□□ 1.58
PRDM5-202ENST00000394435 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
PRDM5-202ENST00000394435 SCAF1Q9H7N4 1312 aaKnown RBP24.84■■□□□ 1.57
PRDM5-202ENST00000394435 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
PRDM5-202ENST00000394435 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.56
PRDM5-202ENST00000394435 RRBP1Q9P2E9 1410 aaKnown RBP24.75■■□□□ 1.55
PRDM5-202ENST00000394435 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
PRDM5-202ENST00000394435 NESP48681 1621 aa24.71■■□□□ 1.55
PRDM5-202ENST00000394435 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
PRDM5-202ENST00000394435 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
PRDM5-202ENST00000394435 DHX57Q6P158 1386 aaKnown RBP24.68■■□□□ 1.54
PRDM5-202ENST00000394435 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
PRDM5-202ENST00000394435 NEUROD1Q13562 356 aa24.66■■□□□ 1.54
PRDM5-202ENST00000394435 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
PRDM5-202ENST00000394435 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
PRDM5-202ENST00000394435 TIAM1Q13009 1591 aa24.63■■□□□ 1.53
PRDM5-202ENST00000394435 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
PRDM5-202ENST00000394435 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
PRDM5-202ENST00000394435 MAP3K1Q13233 1512 aa24.58■■□□□ 1.53
PRDM5-202ENST00000394435 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
PRDM5-202ENST00000394435 ITGAEP38570 1179 aa24.57■■□□□ 1.52
PRDM5-202ENST00000394435 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms