RNA–Protein interactions for RNA: ENST00000568486.5

ULK4P3-205, Transcript of ULK4 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene ULK4P3, Length 1,158 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4P3-205ENST00000568486 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
ULK4P3-205ENST00000568486 CCDC180Q9P1Z9 1646 aa41.39■■■■■ 4.22
ULK4P3-205ENST00000568486 ABCC9O60706 1549 aa41.06■■■■■ 4.16
ULK4P3-205ENST00000568486 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
ULK4P3-205ENST00000568486 NACADO15069 1562 aa39.03■■■■□ 3.84
ULK4P3-205ENST00000568486 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
ULK4P3-205ENST00000568486 MYO15BQ96JP2 1530 aa38.58■■■■□ 3.77
ULK4P3-205ENST00000568486 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
ULK4P3-205ENST00000568486 UNC13AQ9UPW8 1703 aa38.42■■■■□ 3.74
ULK4P3-205ENST00000568486 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.72
ULK4P3-205ENST00000568486 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
ULK4P3-205ENST00000568486 DNAJC5BQ9UF47 199 aa38.2■■■■□ 3.71
ULK4P3-205ENST00000568486 BICRAQ9NZM4 1560 aa38.09■■■■□ 3.69
ULK4P3-205ENST00000568486 SCRIBQ14160 1630 aa37.76■■■■□ 3.63
ULK4P3-205ENST00000568486 SHROOM4Q9ULL8 1493 aa37.53■■■■□ 3.6
ULK4P3-205ENST00000568486 CC2D2AQ9P2K1 1620 aa37.11■■■■□ 3.53
ULK4P3-205ENST00000568486 EIF4G1Q04637 1599 aaKnown RBP37.11■■■■□ 3.53
ULK4P3-205ENST00000568486 CECR2Q9BXF3 1484 aa36.93■■■■□ 3.5
ULK4P3-205ENST00000568486 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
ULK4P3-205ENST00000568486 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
ULK4P3-205ENST00000568486 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
ULK4P3-205ENST00000568486 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
ULK4P3-205ENST00000568486 SMARCA2P51531 1590 aa35.88■■■■□ 3.33
ULK4P3-205ENST00000568486 HMGXB3Q12766 1538 aa35.79■■■■□ 3.32
ULK4P3-205ENST00000568486 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
ULK4P3-205ENST00000568486 PEG3Q9GZU2 1588 aa35.67■■■■□ 3.3
ULK4P3-205ENST00000568486 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
ULK4P3-205ENST00000568486 ERCC6Q03468 1493 aa35.4■■■■□ 3.26
ULK4P3-205ENST00000568486 NESP48681 1621 aa35.38■■■■□ 3.25
ULK4P3-205ENST00000568486 WIZO95785 1651 aa35.3■■■■□ 3.24
ULK4P3-205ENST00000568486 CUX2O14529 1486 aa35.2■■■■□ 3.23
ULK4P3-205ENST00000568486 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
ULK4P3-205ENST00000568486 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
ULK4P3-205ENST00000568486 KIF21AQ7Z4S6 1674 aa34.97■■■■□ 3.19
ULK4P3-205ENST00000568486 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
ULK4P3-205ENST00000568486 CADPSQ9ULU8 1353 aa34.93■■■■□ 3.18
ULK4P3-205ENST00000568486 PDS5BQ9NTI5 1447 aa34.92■■■■□ 3.18
ULK4P3-205ENST00000568486 TOP2AP11388 1531 aaKnown RBP34.84■■■■□ 3.17
ULK4P3-205ENST00000568486 DNAJC5Q9H3Z4 198 aa34.78■■■■□ 3.16
ULK4P3-205ENST00000568486 CFTRP13569 1480 aa34.62■■■■□ 3.13
ULK4P3-205ENST00000568486 MRC2Q9UBG0 1479 aa34.62■■■■□ 3.13
ULK4P3-205ENST00000568486 FANCD2Q9BXW9 1451 aa34.56■■■■□ 3.12
ULK4P3-205ENST00000568486 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
ULK4P3-205ENST00000568486 WDR62O43379 1518 aa34.54■■■■□ 3.12
ULK4P3-205ENST00000568486 CCDC88BA6NC98 1476 aa34.44■■■■□ 3.1
ULK4P3-205ENST00000568486 PRDM2Q13029 1718 aa34.38■■■■□ 3.09
ULK4P3-205ENST00000568486 URB2Q14146 1524 aaKnown RBP34.26■■■■□ 3.08
ULK4P3-205ENST00000568486 TOPBP1Q92547 1522 aa33.95■■■■□ 3.03
ULK4P3-205ENST00000568486 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
ULK4P3-205ENST00000568486 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
ULK4P3-205ENST00000568486 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
ULK4P3-205ENST00000568486 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
ULK4P3-205ENST00000568486 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
ULK4P3-205ENST00000568486 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
ULK4P3-205ENST00000568486 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
ULK4P3-205ENST00000568486 EIF4G3O43432 1585 aaKnown RBP33.63■■■□□ 2.97
ULK4P3-205ENST00000568486 POLA1P09884 1462 aaPredicted RBP33.62■■■□□ 2.97
ULK4P3-205ENST00000568486 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.96
ULK4P3-205ENST00000568486 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
ULK4P3-205ENST00000568486 CUX1P39880 1505 aa33.5■■■□□ 2.95
ULK4P3-205ENST00000568486 FGD5Q6ZNL6 1462 aa33.47■■■□□ 2.95
ULK4P3-205ENST00000568486 SOGA1O94964 1423 aa33.46■■■□□ 2.95
ULK4P3-205ENST00000568486 TRIM41Q8WV44 630 aa33.44■■■□□ 2.94
ULK4P3-205ENST00000568486 TDRD9Q8NDG6 1382 aaKnown RBP33.35■■■□□ 2.93
ULK4P3-205ENST00000568486 CHD1O14646 1710 aa33.34■■■□□ 2.93
ULK4P3-205ENST00000568486 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
ULK4P3-205ENST00000568486 RIMBP3CA6NJZ7 1639 aa33.22■■■□□ 2.91
ULK4P3-205ENST00000568486 RIMBP3BA6NNM3 1639 aa33.22■■■□□ 2.91
ULK4P3-205ENST00000568486 RIMBP3Q9UFD9 1639 aa33.22■■■□□ 2.91
ULK4P3-205ENST00000568486 FBLN2P98095 1184 aa33.21■■■□□ 2.91
ULK4P3-205ENST00000568486 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
ULK4P3-205ENST00000568486 ARHGEF11O15085 1522 aa33.14■■■□□ 2.9
ULK4P3-205ENST00000568486 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
ULK4P3-205ENST00000568486 ABCA10Q8WWZ4 1543 aa33.09■■■□□ 2.89
ULK4P3-205ENST00000568486 MAGI1Q96QZ7 1491 aaPredicted RBP33.09■■■□□ 2.89
ULK4P3-205ENST00000568486 PBRM1Q86U86 1689 aa33.09■■■□□ 2.89
ULK4P3-205ENST00000568486 BIVM-ERCC5R4GMW8 1640 aa33.07■■■□□ 2.88
ULK4P3-205ENST00000568486 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
ULK4P3-205ENST00000568486 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
ULK4P3-205ENST00000568486 WRNQ14191 1432 aaPredicted RBP eCLIP33.05■■■□□ 2.88
ULK4P3-205ENST00000568486 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
ULK4P3-205ENST00000568486 ABCA5Q8WWZ7 1642 aa33.04■■■□□ 2.88
ULK4P3-205ENST00000568486 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.87
ULK4P3-205ENST00000568486 SYNJ2O15056 1496 aa32.98■■■□□ 2.87
ULK4P3-205ENST00000568486 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
ULK4P3-205ENST00000568486 CYB5RLQ6IPT4 315 aa32.86■■■□□ 2.85
ULK4P3-205ENST00000568486 ARAP1Q96P48 1450 aa32.84■■■□□ 2.85
ULK4P3-205ENST00000568486 ADAMTS12P58397 1594 aa32.76■■■□□ 2.84
ULK4P3-205ENST00000568486 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
ULK4P3-205ENST00000568486 ERICH3Q5RHP9 1530 aa32.68■■■□□ 2.82
ULK4P3-205ENST00000568486 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
ULK4P3-205ENST00000568486 CEP170Q5SW79 1584 aa32.61■■■□□ 2.81
ULK4P3-205ENST00000568486 NUP160Q12769 1436 aa32.59■■■□□ 2.81
ULK4P3-205ENST00000568486 ERCC6L2Q5T890 1561 aa32.46■■■□□ 2.79
ULK4P3-205ENST00000568486 SHROOM2Q13796 1616 aa32.43■■■□□ 2.78
ULK4P3-205ENST00000568486 KIF27Q86VH2 1401 aa32.39■■■□□ 2.78
ULK4P3-205ENST00000568486 TRHP20396 242 aaPredicted RBP32.38■■■□□ 2.77
ULK4P3-205ENST00000568486 IGF1RP08069 1367 aa32.34■■■□□ 2.77
ULK4P3-205ENST00000568486 CUL7Q14999 1698 aa32.3■■■□□ 2.76
ULK4P3-205ENST00000568486 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms