RNA–Protein interactions for RNA: ENST00000639090.1

KCNMA1-251, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-251ENST00000639090 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
KCNMA1-251ENST00000639090 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
KCNMA1-251ENST00000639090 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
KCNMA1-251ENST00000639090 SHROOM4Q9ULL8 1493 aa26.97■■□□□ 1.91
KCNMA1-251ENST00000639090 EHMT2Q96KQ7 1210 aa26.37■■□□□ 1.81
KCNMA1-251ENST00000639090 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
KCNMA1-251ENST00000639090 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.66
KCNMA1-251ENST00000639090 APLP2Q06481 763 aa25.38■■□□□ 1.65
KCNMA1-251ENST00000639090 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
KCNMA1-251ENST00000639090 RANGAP1P46060 587 aaPredicted RBP25.2■■□□□ 1.62
KCNMA1-251ENST00000639090 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
KCNMA1-251ENST00000639090 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
KCNMA1-251ENST00000639090 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
KCNMA1-251ENST00000639090 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
KCNMA1-251ENST00000639090 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
KCNMA1-251ENST00000639090 PELP1Q8IZL8 1130 aaKnown RBP24.44■■□□□ 1.5
KCNMA1-251ENST00000639090 LOC105371045A0A1W2PR82 267 aa24.38■■□□□ 1.49
KCNMA1-251ENST00000639090 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.49
KCNMA1-251ENST00000639090 CHIC1Q5VXU3 224 aa24.33■■□□□ 1.49
KCNMA1-251ENST00000639090 ABCC9O60706 1549 aa24.1■■□□□ 1.45
KCNMA1-251ENST00000639090 CENPBP07199 599 aaPredicted RBP24.09■■□□□ 1.45
KCNMA1-251ENST00000639090 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.45
KCNMA1-251ENST00000639090 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
KCNMA1-251ENST00000639090 ITGAEP38570 1179 aa24.07■■□□□ 1.44
KCNMA1-251ENST00000639090 YTHDC1Q96MU7 727 aaKnown RBP23.97■■□□□ 1.43
KCNMA1-251ENST00000639090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
KCNMA1-251ENST00000639090 HNRNPUL2Q1KMD3 747 aaKnown RBP23.94■■□□□ 1.42
KCNMA1-251ENST00000639090 HRCP23327 699 aa23.78■■□□□ 1.4
KCNMA1-251ENST00000639090 MYT1LQ9UL68 1186 aa23.69■■□□□ 1.38
KCNMA1-251ENST00000639090 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
KCNMA1-251ENST00000639090 NEFLP07196 543 aa23.58■■□□□ 1.37
KCNMA1-251ENST00000639090 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.36
KCNMA1-251ENST00000639090 ERICH6Q7L0X2 663 aa23.49■■□□□ 1.35
KCNMA1-251ENST00000639090 FAM50AQ14320 339 aaKnown RBP23.38■■□□□ 1.33
KCNMA1-251ENST00000639090 FBLN2P98095 1184 aa23.24■■□□□ 1.31
KCNMA1-251ENST00000639090 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
KCNMA1-251ENST00000639090 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
KCNMA1-251ENST00000639090 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
KCNMA1-251ENST00000639090 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
KCNMA1-251ENST00000639090 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
KCNMA1-251ENST00000639090 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
KCNMA1-251ENST00000639090 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
KCNMA1-251ENST00000639090 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
KCNMA1-251ENST00000639090 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
KCNMA1-251ENST00000639090 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
KCNMA1-251ENST00000639090 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
KCNMA1-251ENST00000639090 DAXXQ9UER7 740 aaPredicted RBP22.7■■□□□ 1.22
KCNMA1-251ENST00000639090 ZNF316A6NFI3 1004 aaPredicted RBP22.67■■□□□ 1.22
KCNMA1-251ENST00000639090 ANP32CO43423 234 aa22.63■■□□□ 1.21
KCNMA1-251ENST00000639090 BCANQ96GW7 911 aa22.62■■□□□ 1.21
KCNMA1-251ENST00000639090 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
KCNMA1-251ENST00000639090 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
KCNMA1-251ENST00000639090 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
KCNMA1-251ENST00000639090 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
KCNMA1-251ENST00000639090 CHIC2Q9UKJ5 165 aa22.43■■□□□ 1.18
KCNMA1-251ENST00000639090 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
KCNMA1-251ENST00000639090 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
KCNMA1-251ENST00000639090 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
KCNMA1-251ENST00000639090 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
KCNMA1-251ENST00000639090 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
KCNMA1-251ENST00000639090 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
KCNMA1-251ENST00000639090 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
KCNMA1-251ENST00000639090 MYT1Q01538 1121 aa22.24■■□□□ 1.15
KCNMA1-251ENST00000639090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.15
KCNMA1-251ENST00000639090 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
KCNMA1-251ENST00000639090 CLIP1P30622 1438 aa22.23■■□□□ 1.15
KCNMA1-251ENST00000639090 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
KCNMA1-251ENST00000639090 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
KCNMA1-251ENST00000639090 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
KCNMA1-251ENST00000639090 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
KCNMA1-251ENST00000639090 SLC24A1O60721 1099 aa22.2■■□□□ 1.14
KCNMA1-251ENST00000639090 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
KCNMA1-251ENST00000639090 HIRIP3Q9BW71 556 aaPredicted RBP22.15■■□□□ 1.14
KCNMA1-251ENST00000639090 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
KCNMA1-251ENST00000639090 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
KCNMA1-251ENST00000639090 RTL5Q5HYW3 569 aaPredicted RBP22.14■■□□□ 1.14
KCNMA1-251ENST00000639090 ESF1Q9H501 851 aaKnown RBP22.14■■□□□ 1.14
KCNMA1-251ENST00000639090 CANXP27824 592 aaKnown RBP22.11■■□□□ 1.13
KCNMA1-251ENST00000639090 KDM2AQ9Y2K7 1162 aa22.1■■□□□ 1.13
KCNMA1-251ENST00000639090 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
KCNMA1-251ENST00000639090 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
KCNMA1-251ENST00000639090 RRP7BPQ9NSQ0 103 aa22.09■■□□□ 1.13
KCNMA1-251ENST00000639090 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.13
KCNMA1-251ENST00000639090 SALL2Q9Y467 1007 aaPredicted RBP22.08■■□□□ 1.13
KCNMA1-251ENST00000639090 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.12
KCNMA1-251ENST00000639090 NEFMP07197 916 aa22.07■■□□□ 1.12
KCNMA1-251ENST00000639090 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
KCNMA1-251ENST00000639090 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
KCNMA1-251ENST00000639090 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
KCNMA1-251ENST00000639090 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
KCNMA1-251ENST00000639090 NACADO15069 1562 aa22.03■■□□□ 1.12
KCNMA1-251ENST00000639090 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
KCNMA1-251ENST00000639090 FKBP8Q14318 412 aa21.98■■□□□ 1.11
KCNMA1-251ENST00000639090 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
KCNMA1-251ENST00000639090 EEA1Q15075 1411 aa21.96■■□□□ 1.11
KCNMA1-251ENST00000639090 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
KCNMA1-251ENST00000639090 MIER1Q8N108 512 aa21.93■■□□□ 1.1
KCNMA1-251ENST00000639090 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
KCNMA1-251ENST00000639090 TMC1Q8TDI8 760 aa21.91■■□□□ 1.1
KCNMA1-251ENST00000639090 KIF27Q86VH2 1401 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms