RNA–Protein interactions for RNA: ENST00000590430.5

TK1-204, Transcript of thymidine kinase 1, humanhuman

TSL 3 BASIC

Gene TK1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK1-204ENST00000590430 NISCHQ9Y2I1 1504 aa40.69■■■■■ 4.1
TK1-204ENST00000590430 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
TK1-204ENST00000590430 ABCC9O60706 1549 aa36.29■■■■□ 3.4
TK1-204ENST00000590430 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
TK1-204ENST00000590430 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
TK1-204ENST00000590430 NACADO15069 1562 aa34.45■■■■□ 3.1
TK1-204ENST00000590430 MYO15BQ96JP2 1530 aa34■■■■□ 3.03
TK1-204ENST00000590430 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
TK1-204ENST00000590430 ZCCHC6Q5VYS8 1495 aaKnown RBP33.85■■■■□ 3.01
TK1-204ENST00000590430 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
TK1-204ENST00000590430 UNC13AQ9UPW8 1703 aa33.71■■■□□ 2.99
TK1-204ENST00000590430 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
TK1-204ENST00000590430 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
TK1-204ENST00000590430 SCRIBQ14160 1630 aa33.2■■■□□ 2.9
TK1-204ENST00000590430 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
TK1-204ENST00000590430 CC2D2AQ9P2K1 1620 aa32.76■■■□□ 2.83
TK1-204ENST00000590430 EIF4G1Q04637 1599 aaKnown RBP32.73■■■□□ 2.83
TK1-204ENST00000590430 CECR2Q9BXF3 1484 aa32.69■■■□□ 2.82
TK1-204ENST00000590430 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
TK1-204ENST00000590430 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.66
TK1-204ENST00000590430 SMARCA4P51532 1647 aa31.67■■■□□ 2.66
TK1-204ENST00000590430 SMARCA2P51531 1590 aa31.66■■■□□ 2.66
TK1-204ENST00000590430 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
TK1-204ENST00000590430 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
TK1-204ENST00000590430 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
TK1-204ENST00000590430 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
TK1-204ENST00000590430 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
TK1-204ENST00000590430 MROH2BQ7Z745 1585 aa31.32■■■□□ 2.6
TK1-204ENST00000590430 CUX2O14529 1486 aa31.23■■■□□ 2.59
TK1-204ENST00000590430 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
TK1-204ENST00000590430 NESP48681 1621 aa31.17■■■□□ 2.58
TK1-204ENST00000590430 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
TK1-204ENST00000590430 DNAJC5Q9H3Z4 198 aa31.06■■■□□ 2.56
TK1-204ENST00000590430 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
TK1-204ENST00000590430 WIZO95785 1651 aa30.96■■■□□ 2.55
TK1-204ENST00000590430 PDS5BQ9NTI5 1447 aa30.94■■■□□ 2.54
TK1-204ENST00000590430 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
TK1-204ENST00000590430 THOC2Q8NI27 1593 aaKnown RBP30.78■■■□□ 2.52
TK1-204ENST00000590430 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
TK1-204ENST00000590430 TOP2AP11388 1531 aaKnown RBP30.6■■■□□ 2.49
TK1-204ENST00000590430 MRC2Q9UBG0 1479 aa30.58■■■□□ 2.49
TK1-204ENST00000590430 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
TK1-204ENST00000590430 CFTRP13569 1480 aa30.5■■■□□ 2.47
TK1-204ENST00000590430 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
TK1-204ENST00000590430 WDR62O43379 1518 aa30.45■■■□□ 2.47
TK1-204ENST00000590430 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
TK1-204ENST00000590430 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
TK1-204ENST00000590430 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
TK1-204ENST00000590430 ABCC8Q09428 1581 aa29.96■■■□□ 2.39
TK1-204ENST00000590430 OSCARQ8IYS5 282 aa29.96■■■□□ 2.39
TK1-204ENST00000590430 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
TK1-204ENST00000590430 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
TK1-204ENST00000590430 TRIM41Q8WV44 630 aa29.83■■■□□ 2.37
TK1-204ENST00000590430 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
TK1-204ENST00000590430 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
TK1-204ENST00000590430 ZNF608Q9ULD9 1512 aaPredicted RBP29.77■■■□□ 2.36
TK1-204ENST00000590430 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
TK1-204ENST00000590430 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
TK1-204ENST00000590430 AQRO60306 1485 aaKnown RBP eCLIP29.58■■■□□ 2.333e-7■■■■□ 22.8
TK1-204ENST00000590430 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
TK1-204ENST00000590430 SOGA1O94964 1423 aa29.56■■■□□ 2.32
TK1-204ENST00000590430 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
TK1-204ENST00000590430 FBLN2P98095 1184 aa29.5■■■□□ 2.31
TK1-204ENST00000590430 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
TK1-204ENST00000590430 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
TK1-204ENST00000590430 CUX1P39880 1505 aa29.42■■■□□ 2.3
TK1-204ENST00000590430 RIMBP3CA6NJZ7 1639 aa29.37■■■□□ 2.29
TK1-204ENST00000590430 RIMBP3BA6NNM3 1639 aa29.37■■■□□ 2.29
TK1-204ENST00000590430 RIMBP3Q9UFD9 1639 aa29.37■■■□□ 2.29
TK1-204ENST00000590430 WDR97A6NE52 1622 aa29.35■■■□□ 2.29
TK1-204ENST00000590430 CHD1O14646 1710 aa29.35■■■□□ 2.29
TK1-204ENST00000590430 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
TK1-204ENST00000590430 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
TK1-204ENST00000590430 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
TK1-204ENST00000590430 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
TK1-204ENST00000590430 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
TK1-204ENST00000590430 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
TK1-204ENST00000590430 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
TK1-204ENST00000590430 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
TK1-204ENST00000590430 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
TK1-204ENST00000590430 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
TK1-204ENST00000590430 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
TK1-204ENST00000590430 ABCA10Q8WWZ4 1543 aa29.14■■■□□ 2.25
TK1-204ENST00000590430 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
TK1-204ENST00000590430 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
TK1-204ENST00000590430 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
TK1-204ENST00000590430 ARAP1Q96P48 1450 aa29.01■■■□□ 2.23
TK1-204ENST00000590430 CLASP1Q7Z460 1538 aa29■■■□□ 2.23
TK1-204ENST00000590430 TRHP20396 242 aaPredicted RBP28.9■■■□□ 2.22
TK1-204ENST00000590430 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
TK1-204ENST00000590430 FAM9AQ8IZU1 332 aaPredicted RBP28.83■■■□□ 2.21
TK1-204ENST00000590430 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
TK1-204ENST00000590430 EEA1Q15075 1411 aa28.8■■■□□ 2.2
TK1-204ENST00000590430 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
TK1-204ENST00000590430 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
TK1-204ENST00000590430 RUSC2Q8N2Y8 1516 aa28.77■■■□□ 2.2
TK1-204ENST00000590430 NUP160Q12769 1436 aa28.72■■■□□ 2.19
TK1-204ENST00000590430 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
TK1-204ENST00000590430 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
TK1-204ENST00000590430 LOC105371045A0A1W2PR82 267 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms