RNA–Protein interactions for RNA: ENST00000451519.1

VPS37D-202, Transcript of VPS37D, ESCRT-I subunit, humanhuman

TSL 5 BASIC

Gene VPS37D, Length 1,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37D-202ENST00000451519 NISCHQ9Y2I1 1504 aa44.05■■■■■ 4.64
VPS37D-202ENST00000451519 CCDC180Q9P1Z9 1646 aa39.07■■■■□ 3.85
VPS37D-202ENST00000451519 ABCC9O60706 1549 aa38.34■■■■□ 3.73
VPS37D-202ENST00000451519 DCAF8L2P0C7V8 631 aa36.97■■■■□ 3.51
VPS37D-202ENST00000451519 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
VPS37D-202ENST00000451519 NACADO15069 1562 aa36.72■■■■□ 3.47
VPS37D-202ENST00000451519 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
VPS37D-202ENST00000451519 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
VPS37D-202ENST00000451519 DCAF1Q9Y4B6 1507 aa36.33■■■■□ 3.41
VPS37D-202ENST00000451519 UNC13AQ9UPW8 1703 aa36.01■■■■□ 3.36
VPS37D-202ENST00000451519 PABPN1Q86U42 306 aaKnown RBP eCLIP35.87■■■■□ 3.33
VPS37D-202ENST00000451519 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
VPS37D-202ENST00000451519 BICRAQ9NZM4 1560 aa35.69■■■■□ 3.3
VPS37D-202ENST00000451519 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
VPS37D-202ENST00000451519 DNAJC5BQ9UF47 199 aa35.1■■■■□ 3.21
VPS37D-202ENST00000451519 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
VPS37D-202ENST00000451519 CC2D2AQ9P2K1 1620 aa34.62■■■■□ 3.13
VPS37D-202ENST00000451519 CECR2Q9BXF3 1484 aa34.39■■■■□ 3.1
VPS37D-202ENST00000451519 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
VPS37D-202ENST00000451519 BAZ1AQ9NRL2 1556 aaPredicted RBP34.12■■■■□ 3.05
VPS37D-202ENST00000451519 MROH2BQ7Z745 1585 aa34.01■■■■□ 3.03
VPS37D-202ENST00000451519 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
VPS37D-202ENST00000451519 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
VPS37D-202ENST00000451519 NCAPD3P42695 1498 aa33.87■■■■□ 3.01
VPS37D-202ENST00000451519 PEG3Q9GZU2 1588 aa33.75■■■□□ 2.99
VPS37D-202ENST00000451519 HMGXB3Q12766 1538 aa33.73■■■□□ 2.99
VPS37D-202ENST00000451519 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
VPS37D-202ENST00000451519 WIZO95785 1651 aa33.68■■■□□ 2.98
VPS37D-202ENST00000451519 RSF1Q96T23 1441 aaPredicted RBP33.61■■■□□ 2.97
VPS37D-202ENST00000451519 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
VPS37D-202ENST00000451519 NESP48681 1621 aa33.2■■■□□ 2.9
VPS37D-202ENST00000451519 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
VPS37D-202ENST00000451519 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
VPS37D-202ENST00000451519 SUPT5HO00267 1087 aaKnown RBP32.98■■■□□ 2.87
VPS37D-202ENST00000451519 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
VPS37D-202ENST00000451519 CCDC88BA6NC98 1476 aa32.89■■■□□ 2.86
VPS37D-202ENST00000451519 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
VPS37D-202ENST00000451519 PDS5BQ9NTI5 1447 aa32.78■■■□□ 2.84
VPS37D-202ENST00000451519 CFTRP13569 1480 aa32.74■■■□□ 2.83
VPS37D-202ENST00000451519 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
VPS37D-202ENST00000451519 THOC2Q8NI27 1593 aaKnown RBP32.6■■■□□ 2.81
VPS37D-202ENST00000451519 CEP164Q9UPV0 1460 aa32.55■■■□□ 2.8
VPS37D-202ENST00000451519 PRDM2Q13029 1718 aa32.52■■■□□ 2.8
VPS37D-202ENST00000451519 CUX2O14529 1486 aa32.51■■■□□ 2.8
VPS37D-202ENST00000451519 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
VPS37D-202ENST00000451519 WDR62O43379 1518 aa32.34■■■□□ 2.77
VPS37D-202ENST00000451519 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
VPS37D-202ENST00000451519 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
VPS37D-202ENST00000451519 DNMBPQ6XZF7 1577 aa32.04■■■□□ 2.72
VPS37D-202ENST00000451519 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
VPS37D-202ENST00000451519 CUX1P39880 1505 aa31.89■■■□□ 2.7
VPS37D-202ENST00000451519 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.69
VPS37D-202ENST00000451519 IFT140Q96RY7 1462 aa31.82■■■□□ 2.69
VPS37D-202ENST00000451519 FGD5Q6ZNL6 1462 aa31.78■■■□□ 2.68
VPS37D-202ENST00000451519 ZNF608Q9ULD9 1512 aaPredicted RBP31.77■■■□□ 2.68
VPS37D-202ENST00000451519 RAD54L2Q9Y4B4 1467 aa31.75■■■□□ 2.67
VPS37D-202ENST00000451519 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.67
VPS37D-202ENST00000451519 WRNQ14191 1432 aaPredicted RBP eCLIP31.7■■■□□ 2.67
VPS37D-202ENST00000451519 SOGA1O94964 1423 aa31.69■■■□□ 2.66
VPS37D-202ENST00000451519 SYNJ1O43426 1573 aa31.66■■■□□ 2.66
VPS37D-202ENST00000451519 EIF4G3O43432 1585 aaKnown RBP31.62■■■□□ 2.65
VPS37D-202ENST00000451519 AQRO60306 1485 aaKnown RBP eCLIP31.6■■■□□ 2.651e-6■■■■■ 33.8
VPS37D-202ENST00000451519 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
VPS37D-202ENST00000451519 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
VPS37D-202ENST00000451519 TDRD9Q8NDG6 1382 aaKnown RBP31.56■■■□□ 2.64
VPS37D-202ENST00000451519 WDR97A6NE52 1622 aa31.48■■■□□ 2.63
VPS37D-202ENST00000451519 DNAJC5Q9H3Z4 198 aa31.47■■■□□ 2.63
VPS37D-202ENST00000451519 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
VPS37D-202ENST00000451519 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
VPS37D-202ENST00000451519 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
VPS37D-202ENST00000451519 SNAPC4Q5SXM2 1469 aa31.3■■■□□ 2.6
VPS37D-202ENST00000451519 GRIN2BQ13224 1484 aa31.29■■■□□ 2.6
VPS37D-202ENST00000451519 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
VPS37D-202ENST00000451519 FBLN2P98095 1184 aa31.27■■■□□ 2.6
VPS37D-202ENST00000451519 OSCARQ8IYS5 282 aa31.24■■■□□ 2.59
VPS37D-202ENST00000451519 CHD1O14646 1710 aa31.23■■■□□ 2.59
VPS37D-202ENST00000451519 MAGI1Q96QZ7 1491 aaPredicted RBP31.18■■■□□ 2.58
VPS37D-202ENST00000451519 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
VPS37D-202ENST00000451519 SYNJ2O15056 1496 aa31.07■■■□□ 2.56
VPS37D-202ENST00000451519 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
VPS37D-202ENST00000451519 ERICH3Q5RHP9 1530 aa31.02■■■□□ 2.56
VPS37D-202ENST00000451519 ADAMTS12P58397 1594 aa31.02■■■□□ 2.56
VPS37D-202ENST00000451519 KIF27Q86VH2 1401 aa31.01■■■□□ 2.56
VPS37D-202ENST00000451519 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
VPS37D-202ENST00000451519 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
VPS37D-202ENST00000451519 IGF1RP08069 1367 aa30.87■■■□□ 2.53
VPS37D-202ENST00000451519 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
VPS37D-202ENST00000451519 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
VPS37D-202ENST00000451519 CUL7Q14999 1698 aa30.78■■■□□ 2.52
VPS37D-202ENST00000451519 CEP170Q5SW79 1584 aa30.78■■■□□ 2.52
VPS37D-202ENST00000451519 RIMBP3CA6NJZ7 1639 aa30.77■■■□□ 2.52
VPS37D-202ENST00000451519 RIMBP3BA6NNM3 1639 aa30.77■■■□□ 2.52
VPS37D-202ENST00000451519 RIMBP3Q9UFD9 1639 aa30.77■■■□□ 2.52
VPS37D-202ENST00000451519 ARHGEF11O15085 1522 aa30.76■■■□□ 2.51
VPS37D-202ENST00000451519 NUP160Q12769 1436 aa30.73■■■□□ 2.51
VPS37D-202ENST00000451519 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
VPS37D-202ENST00000451519 CARMIL1Q5VZK9 1371 aa30.71■■■□□ 2.51
VPS37D-202ENST00000451519 FAM9AQ8IZU1 332 aaPredicted RBP30.54■■■□□ 2.48
VPS37D-202ENST00000451519 CYB5RLQ6IPT4 315 aa30.53■■■□□ 2.48
VPS37D-202ENST00000451519 ARAP1Q96P48 1450 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms