RNA–Protein interactions for RNA: ENST00000571881.2

CLDN7-204, Transcript of claudin 7, humanhuman

TSL 3 BASIC

Gene CLDN7, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-204ENST00000571881 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
CLDN7-204ENST00000571881 CCDC180Q9P1Z9 1646 aa39.63■■■■□ 3.93
CLDN7-204ENST00000571881 ABCC9O60706 1549 aa38.85■■■■□ 3.81
CLDN7-204ENST00000571881 DCAF8L2P0C7V8 631 aa37.32■■■■□ 3.56
CLDN7-204ENST00000571881 RB1CC1Q8TDY2 1594 aa37.32■■■■□ 3.56
CLDN7-204ENST00000571881 NACADO15069 1562 aa37.19■■■■□ 3.54
CLDN7-204ENST00000571881 ZCCHC6Q5VYS8 1495 aaKnown RBP36.99■■■■□ 3.51
CLDN7-204ENST00000571881 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
CLDN7-204ENST00000571881 DCAF1Q9Y4B6 1507 aa36.66■■■■□ 3.46
CLDN7-204ENST00000571881 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
CLDN7-204ENST00000571881 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.4
CLDN7-204ENST00000571881 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
CLDN7-204ENST00000571881 BICRAQ9NZM4 1560 aa36.12■■■■□ 3.37
CLDN7-204ENST00000571881 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
CLDN7-204ENST00000571881 DNAJC5BQ9UF47 199 aa35.55■■■■□ 3.28
CLDN7-204ENST00000571881 EIF4G1Q04637 1599 aaKnown RBP35.21■■■■□ 3.23
CLDN7-204ENST00000571881 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
CLDN7-204ENST00000571881 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
CLDN7-204ENST00000571881 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
CLDN7-204ENST00000571881 BAZ1AQ9NRL2 1556 aaPredicted RBP34.49■■■■□ 3.11
CLDN7-204ENST00000571881 SMARCA2P51531 1590 aa34.32■■■■□ 3.08
CLDN7-204ENST00000571881 ATAD2BQ9ULI0 1458 aa34.29■■■■□ 3.08
CLDN7-204ENST00000571881 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
CLDN7-204ENST00000571881 NCAPD3P42695 1498 aa34.22■■■■□ 3.07
CLDN7-204ENST00000571881 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
CLDN7-204ENST00000571881 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
CLDN7-204ENST00000571881 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
CLDN7-204ENST00000571881 WIZO95785 1651 aa34.01■■■■□ 3.04
CLDN7-204ENST00000571881 RSF1Q96T23 1441 aaPredicted RBP33.79■■■■□ 3
CLDN7-204ENST00000571881 NESP48681 1621 aa33.57■■■□□ 2.97
CLDN7-204ENST00000571881 TOP2AP11388 1531 aaKnown RBP33.56■■■□□ 2.96
CLDN7-204ENST00000571881 ERCC6Q03468 1493 aa33.54■■■□□ 2.96
CLDN7-204ENST00000571881 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
CLDN7-204ENST00000571881 KIF21AQ7Z4S6 1674 aa33.31■■■□□ 2.92
CLDN7-204ENST00000571881 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
CLDN7-204ENST00000571881 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
CLDN7-204ENST00000571881 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
CLDN7-204ENST00000571881 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
CLDN7-204ENST00000571881 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
CLDN7-204ENST00000571881 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
CLDN7-204ENST00000571881 CUX2O14529 1486 aa33.06■■■□□ 2.88
CLDN7-204ENST00000571881 CFTRP13569 1480 aa33.05■■■□□ 2.88
CLDN7-204ENST00000571881 FANCD2Q9BXW9 1451 aa32.97■■■□□ 2.87
CLDN7-204ENST00000571881 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
CLDN7-204ENST00000571881 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
CLDN7-204ENST00000571881 WDR62O43379 1518 aa32.77■■■□□ 2.84
CLDN7-204ENST00000571881 URB2Q14146 1524 aaKnown RBP32.63■■■□□ 2.81
CLDN7-204ENST00000571881 TOPBP1Q92547 1522 aa32.43■■■□□ 2.78
CLDN7-204ENST00000571881 DNMBPQ6XZF7 1577 aa32.42■■■□□ 2.78
CLDN7-204ENST00000571881 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
CLDN7-204ENST00000571881 IFT140Q96RY7 1462 aa32.22■■■□□ 2.75
CLDN7-204ENST00000571881 CUX1P39880 1505 aa32.17■■■□□ 2.74
CLDN7-204ENST00000571881 POLA1P09884 1462 aaPredicted RBP32.14■■■□□ 2.74
CLDN7-204ENST00000571881 ZNF608Q9ULD9 1512 aaPredicted RBP32.1■■■□□ 2.73
CLDN7-204ENST00000571881 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
CLDN7-204ENST00000571881 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
CLDN7-204ENST00000571881 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
CLDN7-204ENST00000571881 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
CLDN7-204ENST00000571881 RAD54L2Q9Y4B4 1467 aa32.03■■■□□ 2.72
CLDN7-204ENST00000571881 SOGA1O94964 1423 aa32■■■□□ 2.71
CLDN7-204ENST00000571881 WRNQ14191 1432 aaPredicted RBP eCLIP31.93■■■□□ 2.7
CLDN7-204ENST00000571881 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
CLDN7-204ENST00000571881 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
CLDN7-204ENST00000571881 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
CLDN7-204ENST00000571881 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
CLDN7-204ENST00000571881 WDR97A6NE52 1622 aa31.89■■■□□ 2.7
CLDN7-204ENST00000571881 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
CLDN7-204ENST00000571881 CHD1O14646 1710 aa31.77■■■□□ 2.68
CLDN7-204ENST00000571881 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
CLDN7-204ENST00000571881 ABCA10Q8WWZ4 1543 aa31.71■■■□□ 2.67
CLDN7-204ENST00000571881 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
CLDN7-204ENST00000571881 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
CLDN7-204ENST00000571881 SNAPC4Q5SXM2 1469 aa31.66■■■□□ 2.66
CLDN7-204ENST00000571881 FBLN2P98095 1184 aa31.66■■■□□ 2.66
CLDN7-204ENST00000571881 GAPVD1Q14C86 1478 aa31.65■■■□□ 2.66
CLDN7-204ENST00000571881 GRIN2BQ13224 1484 aa31.65■■■□□ 2.66
CLDN7-204ENST00000571881 MAGI1Q96QZ7 1491 aaPredicted RBP31.56■■■□□ 2.64
CLDN7-204ENST00000571881 CHMP7Q8WUX9 453 aaPredicted RBP31.47■■■□□ 2.63
CLDN7-204ENST00000571881 SYNJ2O15056 1496 aa31.44■■■□□ 2.62
CLDN7-204ENST00000571881 ADAMTS12P58397 1594 aa31.39■■■□□ 2.62
CLDN7-204ENST00000571881 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
CLDN7-204ENST00000571881 RIMBP3CA6NJZ7 1639 aa31.31■■■□□ 2.6
CLDN7-204ENST00000571881 RIMBP3BA6NNM3 1639 aa31.31■■■□□ 2.6
CLDN7-204ENST00000571881 RIMBP3Q9UFD9 1639 aa31.31■■■□□ 2.6
CLDN7-204ENST00000571881 KIF27Q86VH2 1401 aa31.26■■■□□ 2.6
CLDN7-204ENST00000571881 GRIN2AQ12879 1464 aa31.25■■■□□ 2.59
CLDN7-204ENST00000571881 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
CLDN7-204ENST00000571881 ARHGEF11O15085 1522 aa31.23■■■□□ 2.59
CLDN7-204ENST00000571881 CLASP1Q7Z460 1538 aa31.23■■■□□ 2.59
CLDN7-204ENST00000571881 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
CLDN7-204ENST00000571881 CUL7Q14999 1698 aa31.16■■■□□ 2.58
CLDN7-204ENST00000571881 CEP170Q5SW79 1584 aa31.14■■■□□ 2.58
CLDN7-204ENST00000571881 IGF1RP08069 1367 aa31.05■■■□□ 2.56
CLDN7-204ENST00000571881 NUP160Q12769 1436 aa31.03■■■□□ 2.56
CLDN7-204ENST00000571881 RUSC2Q8N2Y8 1516 aa30.98■■■□□ 2.55
CLDN7-204ENST00000571881 ARAP1Q96P48 1450 aa30.95■■■□□ 2.55
CLDN7-204ENST00000571881 CARMIL1Q5VZK9 1371 aa30.94■■■□□ 2.54
CLDN7-204ENST00000571881 CYB5RLQ6IPT4 315 aa30.94■■■□□ 2.54
CLDN7-204ENST00000571881 SHROOM2Q13796 1616 aa30.89■■■□□ 2.54
CLDN7-204ENST00000571881 ERCC6L2Q5T890 1561 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms