RNA–Protein interactions for RNA: ENST00000536794.6

ABR-203, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-203ENST00000536794 NISCHQ9Y2I1 1504 aa34.62■■■■□ 3.13
ABR-203ENST00000536794 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
ABR-203ENST00000536794 ABCC9O60706 1549 aa30.31■■■□□ 2.44
ABR-203ENST00000536794 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
ABR-203ENST00000536794 NACADO15069 1562 aa29.14■■■□□ 2.25
ABR-203ENST00000536794 MYO15BQ96JP2 1530 aa28.97■■■□□ 2.23
ABR-203ENST00000536794 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
ABR-203ENST00000536794 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
ABR-203ENST00000536794 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
ABR-203ENST00000536794 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
ABR-203ENST00000536794 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.12
ABR-203ENST00000536794 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
ABR-203ENST00000536794 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
ABR-203ENST00000536794 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
ABR-203ENST00000536794 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
ABR-203ENST00000536794 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
ABR-203ENST00000536794 HRCP23327 699 aa27.64■■■□□ 2.01
ABR-203ENST00000536794 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
ABR-203ENST00000536794 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
ABR-203ENST00000536794 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
ABR-203ENST00000536794 CHIC1Q5VXU3 224 aa27.2■■□□□ 1.94
ABR-203ENST00000536794 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
ABR-203ENST00000536794 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
ABR-203ENST00000536794 SMARCA4P51532 1647 aa26.89■■□□□ 1.9
ABR-203ENST00000536794 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
ABR-203ENST00000536794 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
ABR-203ENST00000536794 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
ABR-203ENST00000536794 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
ABR-203ENST00000536794 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
ABR-203ENST00000536794 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
ABR-203ENST00000536794 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
ABR-203ENST00000536794 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
ABR-203ENST00000536794 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
ABR-203ENST00000536794 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
ABR-203ENST00000536794 PELP1Q8IZL8 1130 aaKnown RBP26.33■■□□□ 1.8
ABR-203ENST00000536794 WIZO95785 1651 aa26.29■■□□□ 1.8
ABR-203ENST00000536794 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
ABR-203ENST00000536794 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.78
ABR-203ENST00000536794 ZEB1P37275 1124 aaPredicted RBP26.19■■□□□ 1.78
ABR-203ENST00000536794 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
ABR-203ENST00000536794 NESP48681 1621 aa26.16■■□□□ 1.78
ABR-203ENST00000536794 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
ABR-203ENST00000536794 CUX2O14529 1486 aa26.08■■□□□ 1.77
ABR-203ENST00000536794 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
ABR-203ENST00000536794 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
ABR-203ENST00000536794 SCAF1Q9H7N4 1312 aaKnown RBP25.95■■□□□ 1.75
ABR-203ENST00000536794 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
ABR-203ENST00000536794 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
ABR-203ENST00000536794 CFTRP13569 1480 aa25.86■■□□□ 1.73
ABR-203ENST00000536794 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
ABR-203ENST00000536794 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
ABR-203ENST00000536794 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
ABR-203ENST00000536794 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
ABR-203ENST00000536794 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
ABR-203ENST00000536794 WDR62O43379 1518 aa25.67■■□□□ 1.7
ABR-203ENST00000536794 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
ABR-203ENST00000536794 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
ABR-203ENST00000536794 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
ABR-203ENST00000536794 URB2Q14146 1524 aaKnown RBP25.46■■□□□ 1.67
ABR-203ENST00000536794 ACIN1Q9UKV3 1341 aaKnown RBP25.45■■□□□ 1.67
ABR-203ENST00000536794 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
ABR-203ENST00000536794 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
ABR-203ENST00000536794 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
ABR-203ENST00000536794 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
ABR-203ENST00000536794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.27■■□□□ 1.64
ABR-203ENST00000536794 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
ABR-203ENST00000536794 CCER1Q8TC90 406 aaPredicted RBP25.26■■□□□ 1.63
ABR-203ENST00000536794 MYT1Q01538 1121 aa25.24■■□□□ 1.63
ABR-203ENST00000536794 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
ABR-203ENST00000536794 CENPBP07199 599 aaPredicted RBP25.21■■□□□ 1.63
ABR-203ENST00000536794 GTF3C3Q9Y5Q9 886 aa25.2■■□□□ 1.62
ABR-203ENST00000536794 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
ABR-203ENST00000536794 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
ABR-203ENST00000536794 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
ABR-203ENST00000536794 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
ABR-203ENST00000536794 CUX1P39880 1505 aa24.99■■□□□ 1.59
ABR-203ENST00000536794 EIF4G3O43432 1585 aaKnown RBP24.96■■□□□ 1.59
ABR-203ENST00000536794 SOGA1O94964 1423 aa24.95■■□□□ 1.59
ABR-203ENST00000536794 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
ABR-203ENST00000536794 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
ABR-203ENST00000536794 OSCARQ8IYS5 282 aa24.9■■□□□ 1.58
ABR-203ENST00000536794 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
ABR-203ENST00000536794 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
ABR-203ENST00000536794 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
ABR-203ENST00000536794 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
ABR-203ENST00000536794 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
ABR-203ENST00000536794 ZNF316A6NFI3 1004 aaPredicted RBP24.77■■□□□ 1.56
ABR-203ENST00000536794 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
ABR-203ENST00000536794 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
ABR-203ENST00000536794 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
ABR-203ENST00000536794 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
ABR-203ENST00000536794 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
ABR-203ENST00000536794 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
ABR-203ENST00000536794 YTHDC1Q96MU7 727 aaKnown RBP24.66■■□□□ 1.54
ABR-203ENST00000536794 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
ABR-203ENST00000536794 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
ABR-203ENST00000536794 CHD1O14646 1710 aa24.65■■□□□ 1.54
ABR-203ENST00000536794 ABCA5Q8WWZ7 1642 aa24.65■■□□□ 1.54
ABR-203ENST00000536794 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
ABR-203ENST00000536794 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms