Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 AC133561.5-201ENST00000635547 218 ntBASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 AC116562.4-202ENST00000641738 218 ntBASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 AC092865.7-201ENST00000641832 219 ntBASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 PKD1P5-201ENST00000532415 10291 ntBASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ANKRD55Q3KP44 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 EGLN1P1-201ENST00000531623 762 ntBASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 AL512604.3-201ENST00000569583 964 ntBASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 AL157888.1-201ENST00000631930 593 ntBASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 MST1L-201ENST00000442552 2185 ntBASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ANKRD55Q3KP44 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 AC211429.1-201ENST00000415277 523 ntBASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 AC009947.2-201ENST00000444014 672 ntBASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 AC002558.1-201ENST00000488906 803 ntBASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ANKRD55Q3KP44 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms