RNA–Protein interactions for RNA: ENST00000548305.5

TMTC2-203, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best) BASIC

Gene TMTC2, Length 2,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-203ENST00000548305 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
TMTC2-203ENST00000548305 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
TMTC2-203ENST00000548305 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.05
TMTC2-203ENST00000548305 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
TMTC2-203ENST00000548305 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.98
TMTC2-203ENST00000548305 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.96
TMTC2-203ENST00000548305 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
TMTC2-203ENST00000548305 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
TMTC2-203ENST00000548305 HRCP23327 699 aa26.83■■□□□ 1.89
TMTC2-203ENST00000548305 PCGF6Q9BYE7 350 aa26.72■■□□□ 1.87
TMTC2-203ENST00000548305 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
TMTC2-203ENST00000548305 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
TMTC2-203ENST00000548305 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
TMTC2-203ENST00000548305 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
TMTC2-203ENST00000548305 MYT1Q01538 1121 aa26.29■■□□□ 1.8
TMTC2-203ENST00000548305 ABCC9O60706 1549 aa26.13■■□□□ 1.77
TMTC2-203ENST00000548305 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.76
TMTC2-203ENST00000548305 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
TMTC2-203ENST00000548305 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
TMTC2-203ENST00000548305 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
TMTC2-203ENST00000548305 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
TMTC2-203ENST00000548305 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
TMTC2-203ENST00000548305 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
TMTC2-203ENST00000548305 CECR2Q9BXF3 1484 aa25.54■■□□□ 1.68
TMTC2-203ENST00000548305 SLC24A1O60721 1099 aa25.51■■□□□ 1.67
TMTC2-203ENST00000548305 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
TMTC2-203ENST00000548305 TTBK1Q5TCY1 1321 aaPredicted RBP25.49■■□□□ 1.67
TMTC2-203ENST00000548305 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
TMTC2-203ENST00000548305 PRKCSHP14314 528 aaPredicted RBP25.41■■□□□ 1.66
TMTC2-203ENST00000548305 NACADO15069 1562 aa25.36■■□□□ 1.65
TMTC2-203ENST00000548305 WIZO95785 1651 aa25.31■■□□□ 1.64
TMTC2-203ENST00000548305 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
TMTC2-203ENST00000548305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
TMTC2-203ENST00000548305 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
TMTC2-203ENST00000548305 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
TMTC2-203ENST00000548305 CCER1Q8TC90 406 aaPredicted RBP24.96■■□□□ 1.59
TMTC2-203ENST00000548305 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
TMTC2-203ENST00000548305 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
TMTC2-203ENST00000548305 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
TMTC2-203ENST00000548305 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
TMTC2-203ENST00000548305 SOGA1O94964 1423 aa24.76■■□□□ 1.55
TMTC2-203ENST00000548305 APLP2Q06481 763 aa24.76■■□□□ 1.55
TMTC2-203ENST00000548305 CEP162Q5TB80 1403 aa24.76■■□□□ 1.55
TMTC2-203ENST00000548305 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
TMTC2-203ENST00000548305 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
TMTC2-203ENST00000548305 ERICH6Q7L0X2 663 aa24.7■■□□□ 1.55
TMTC2-203ENST00000548305 RUSC2Q8N2Y8 1516 aa24.64■■□□□ 1.53
TMTC2-203ENST00000548305 UBTFP17480 764 aaKnown RBP24.63■■□□□ 1.53
TMTC2-203ENST00000548305 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
TMTC2-203ENST00000548305 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
TMTC2-203ENST00000548305 DIEXFQ68CQ4 756 aaKnown RBP24.61■■□□□ 1.53
TMTC2-203ENST00000548305 NEUROD1Q13562 356 aa24.58■■□□□ 1.52
TMTC2-203ENST00000548305 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
TMTC2-203ENST00000548305 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
TMTC2-203ENST00000548305 EEA1Q15075 1411 aa24.51■■□□□ 1.51
TMTC2-203ENST00000548305 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
TMTC2-203ENST00000548305 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
TMTC2-203ENST00000548305 CENPBP07199 599 aaPredicted RBP24.37■■□□□ 1.49
TMTC2-203ENST00000548305 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
TMTC2-203ENST00000548305 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
TMTC2-203ENST00000548305 ZNF316A6NFI3 1004 aaPredicted RBP24.3■■□□□ 1.48
TMTC2-203ENST00000548305 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
TMTC2-203ENST00000548305 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
TMTC2-203ENST00000548305 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
TMTC2-203ENST00000548305 BCL11AQ9H165 835 aa24.23■■□□□ 1.47
TMTC2-203ENST00000548305 CLIP1P30622 1438 aa24.23■■□□□ 1.47
TMTC2-203ENST00000548305 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
TMTC2-203ENST00000548305 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
TMTC2-203ENST00000548305 KIF21BO75037 1637 aa24.17■■□□□ 1.46
TMTC2-203ENST00000548305 YTHDC1Q96MU7 727 aaKnown RBP24.17■■□□□ 1.46
TMTC2-203ENST00000548305 VPS8Q8N3P4 1428 aa24.12■■□□□ 1.45
TMTC2-203ENST00000548305 RAPGEF2Q9Y4G8 1499 aa24.12■■□□□ 1.45
TMTC2-203ENST00000548305 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
TMTC2-203ENST00000548305 DAXXQ9UER7 740 aaPredicted RBP24.09■■□□□ 1.45
TMTC2-203ENST00000548305 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
TMTC2-203ENST00000548305 MIER1Q8N108 512 aa24.07■■□□□ 1.44
TMTC2-203ENST00000548305 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
TMTC2-203ENST00000548305 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
TMTC2-203ENST00000548305 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
TMTC2-203ENST00000548305 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
TMTC2-203ENST00000548305 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
TMTC2-203ENST00000548305 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
TMTC2-203ENST00000548305 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
TMTC2-203ENST00000548305 CLSPNQ9HAW4 1339 aa23.67■■□□□ 1.38
TMTC2-203ENST00000548305 CUX1P39880 1505 aa23.65■■□□□ 1.38
TMTC2-203ENST00000548305 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
TMTC2-203ENST00000548305 ITGAEP38570 1179 aa23.59■■□□□ 1.37
TMTC2-203ENST00000548305 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.37
TMTC2-203ENST00000548305 CCNB3Q8WWL7 1395 aa23.53■■□□□ 1.36
TMTC2-203ENST00000548305 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
TMTC2-203ENST00000548305 ARHGAP35Q9NRY4 1499 aa23.53■■□□□ 1.36
TMTC2-203ENST00000548305 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
TMTC2-203ENST00000548305 CFTRP13569 1480 aa23.46■■□□□ 1.35
TMTC2-203ENST00000548305 CUX2O14529 1486 aa23.44■■□□□ 1.34
TMTC2-203ENST00000548305 EIF5BO60841 1220 aaKnown RBP23.43■■□□□ 1.34
TMTC2-203ENST00000548305 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
TMTC2-203ENST00000548305 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
TMTC2-203ENST00000548305 IGF1RP08069 1367 aa23.35■■□□□ 1.33
TMTC2-203ENST00000548305 KCNH8Q96L42 1107 aa23.3■■□□□ 1.32
TMTC2-203ENST00000548305 MAPKBP1O60336 1514 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms