RNA–Protein interactions for RNA: ENST00000622241.1

PRAG1-202, Transcript of PEAK1 related, kinase-activating pseudokinase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRAG1, Length 4,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAG1-202ENST00000622241 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
PRAG1-202ENST00000622241 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
PRAG1-202ENST00000622241 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
PRAG1-202ENST00000622241 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
PRAG1-202ENST00000622241 EHMT2Q96KQ7 1210 aa26.21■■□□□ 1.79
PRAG1-202ENST00000622241 FAM9AQ8IZU1 332 aaPredicted RBP25.99■■□□□ 1.75
PRAG1-202ENST00000622241 APLP2Q06481 763 aa25.92■■□□□ 1.74
PRAG1-202ENST00000622241 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
PRAG1-202ENST00000622241 PCGF6Q9BYE7 350 aa25.84■■□□□ 1.73
PRAG1-202ENST00000622241 ZEB1P37275 1124 aaPredicted RBP25.54■■□□□ 1.68
PRAG1-202ENST00000622241 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
PRAG1-202ENST00000622241 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
PRAG1-202ENST00000622241 UBTFP17480 764 aaKnown RBP25.31■■□□□ 1.64
PRAG1-202ENST00000622241 PELP1Q8IZL8 1130 aaKnown RBP25.26■■□□□ 1.63
PRAG1-202ENST00000622241 CCER1Q8TC90 406 aaPredicted RBP25.21■■□□□ 1.63
PRAG1-202ENST00000622241 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
PRAG1-202ENST00000622241 TRIM26Q12899 539 aaPredicted RBP25.13■■□□□ 1.61
PRAG1-202ENST00000622241 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
PRAG1-202ENST00000622241 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.58
PRAG1-202ENST00000622241 HRCP23327 699 aa24.91■■□□□ 1.58
PRAG1-202ENST00000622241 ABCC9O60706 1549 aa24.9■■□□□ 1.58
PRAG1-202ENST00000622241 ATP1B4Q9UN42 357 aaPredicted RBP24.87■■□□□ 1.57
PRAG1-202ENST00000622241 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
PRAG1-202ENST00000622241 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
PRAG1-202ENST00000622241 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
PRAG1-202ENST00000622241 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
PRAG1-202ENST00000622241 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
PRAG1-202ENST00000622241 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
PRAG1-202ENST00000622241 ITGAEP38570 1179 aa24.25■■□□□ 1.47
PRAG1-202ENST00000622241 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
PRAG1-202ENST00000622241 NEFLP07196 543 aa24.19■■□□□ 1.46
PRAG1-202ENST00000622241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
PRAG1-202ENST00000622241 CSRNP3Q8WYN3 585 aa24.06■■□□□ 1.44
PRAG1-202ENST00000622241 ERICH6Q7L0X2 663 aa23.96■■□□□ 1.43
PRAG1-202ENST00000622241 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
PRAG1-202ENST00000622241 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
PRAG1-202ENST00000622241 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
PRAG1-202ENST00000622241 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
PRAG1-202ENST00000622241 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
PRAG1-202ENST00000622241 NACADO15069 1562 aa23.74■■□□□ 1.39
PRAG1-202ENST00000622241 MYT1Q01538 1121 aa23.67■■□□□ 1.38
PRAG1-202ENST00000622241 MYT1LQ9UL68 1186 aa23.65■■□□□ 1.38
PRAG1-202ENST00000622241 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
PRAG1-202ENST00000622241 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
PRAG1-202ENST00000622241 TRIM52Q96A61 297 aa23.57■■□□□ 1.36
PRAG1-202ENST00000622241 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
PRAG1-202ENST00000622241 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
PRAG1-202ENST00000622241 EEA1Q15075 1411 aa23.47■■□□□ 1.35
PRAG1-202ENST00000622241 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
PRAG1-202ENST00000622241 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
PRAG1-202ENST00000622241 ANP32CO43423 234 aa23.34■■□□□ 1.33
PRAG1-202ENST00000622241 FBLN2P98095 1184 aa23.33■■□□□ 1.33
PRAG1-202ENST00000622241 CNGB1Q14028 1251 aaPredicted RBP23.31■■□□□ 1.32
PRAG1-202ENST00000622241 CLIP1P30622 1438 aa23.28■■□□□ 1.32
PRAG1-202ENST00000622241 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
PRAG1-202ENST00000622241 GTF3C3Q9Y5Q9 886 aa23.27■■□□□ 1.32
PRAG1-202ENST00000622241 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
PRAG1-202ENST00000622241 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
PRAG1-202ENST00000622241 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
PRAG1-202ENST00000622241 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
PRAG1-202ENST00000622241 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
PRAG1-202ENST00000622241 CEP162Q5TB80 1403 aa23.2■■□□□ 1.3
PRAG1-202ENST00000622241 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
PRAG1-202ENST00000622241 DAXXQ9UER7 740 aaPredicted RBP23.13■■□□□ 1.29
PRAG1-202ENST00000622241 ZNF326Q5BKZ1 582 aaKnown RBP23.13■■□□□ 1.29
PRAG1-202ENST00000622241 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
PRAG1-202ENST00000622241 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
PRAG1-202ENST00000622241 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
PRAG1-202ENST00000622241 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
PRAG1-202ENST00000622241 KIF27Q86VH2 1401 aa23.02■■□□□ 1.27
PRAG1-202ENST00000622241 ZNF777Q9ULD5 760 aaPredicted RBP23.01■■□□□ 1.27
PRAG1-202ENST00000622241 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
PRAG1-202ENST00000622241 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
PRAG1-202ENST00000622241 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
PRAG1-202ENST00000622241 BCANQ96GW7 911 aa22.91■■□□□ 1.26
PRAG1-202ENST00000622241 CCDC88BA6NC98 1476 aa22.84■■□□□ 1.25
PRAG1-202ENST00000622241 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
PRAG1-202ENST00000622241 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
PRAG1-202ENST00000622241 SOGA1O94964 1423 aa22.79■■□□□ 1.24
PRAG1-202ENST00000622241 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
PRAG1-202ENST00000622241 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
PRAG1-202ENST00000622241 RTL5Q5HYW3 569 aaPredicted RBP22.73■■□□□ 1.23
PRAG1-202ENST00000622241 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
PRAG1-202ENST00000622241 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
PRAG1-202ENST00000622241 TOP2AP11388 1531 aaKnown RBP22.71■■□□□ 1.23
PRAG1-202ENST00000622241 MIER1Q8N108 512 aa22.67■■□□□ 1.22
PRAG1-202ENST00000622241 ABCC8Q09428 1581 aa22.64■■□□□ 1.21
PRAG1-202ENST00000622241 WIZO95785 1651 aa22.64■■□□□ 1.21
PRAG1-202ENST00000622241 FHAD1B1AJZ9 1412 aa22.63■■□□□ 1.21
PRAG1-202ENST00000622241 HNRNPUQ00839 825 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRAG1-202ENST00000622241 VPS8Q8N3P4 1428 aa22.61■■□□□ 1.21
PRAG1-202ENST00000622241 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
PRAG1-202ENST00000622241 CUX2O14529 1486 aa22.59■■□□□ 1.21
PRAG1-202ENST00000622241 FKBP8Q14318 412 aa22.58■■□□□ 1.21
PRAG1-202ENST00000622241 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
PRAG1-202ENST00000622241 NPM1P06748 294 aaKnown RBP eCLIP22.58■■□□□ 1.2
PRAG1-202ENST00000622241 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
PRAG1-202ENST00000622241 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
PRAG1-202ENST00000622241 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
PRAG1-202ENST00000622241 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms