RNA–Protein interactions for RNA: ENST00000256078.8

KRAS-201, Transcript of KRAS proto-oncogene, GTPase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KRAS, Length 1,119 nt, Biotype protein coding, Subcellular localisation Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRAS-201ENST00000256078 NISCHQ9Y2I1 1504 aa48.13■■■■■ 5.3
KRAS-201ENST00000256078 CCDC180Q9P1Z9 1646 aa43.06■■■■■ 4.48
KRAS-201ENST00000256078 ABCC9O60706 1549 aa42.7■■■■■ 4.43
KRAS-201ENST00000256078 RB1CC1Q8TDY2 1594 aa40.82■■■■■ 4.12
KRAS-201ENST00000256078 NACADO15069 1562 aa40.67■■■■■ 4.1
KRAS-201ENST00000256078 MYO15BQ96JP2 1530 aa40.35■■■■■ 4.05
KRAS-201ENST00000256078 DCAF8L2P0C7V8 631 aa40.17■■■■■ 4.02
KRAS-201ENST00000256078 ZCCHC6Q5VYS8 1495 aaKnown RBP39.99■■■■□ 3.99
KRAS-201ENST00000256078 DNAJC5BQ9UF47 199 aa39.95■■■■□ 3.99
KRAS-201ENST00000256078 DCAF1Q9Y4B6 1507 aa39.89■■■■□ 3.98
KRAS-201ENST00000256078 UNC13AQ9UPW8 1703 aa39.84■■■■□ 3.97
KRAS-201ENST00000256078 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.96
KRAS-201ENST00000256078 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
KRAS-201ENST00000256078 SHROOM4Q9ULL8 1493 aa39.3■■■■□ 3.88
KRAS-201ENST00000256078 SCRIBQ14160 1630 aa39.13■■■■□ 3.85
KRAS-201ENST00000256078 EIF4G1Q04637 1599 aaKnown RBP38.66■■■■□ 3.78
KRAS-201ENST00000256078 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.78
KRAS-201ENST00000256078 CECR2Q9BXF3 1484 aa38.5■■■■□ 3.75
KRAS-201ENST00000256078 NCAPD3P42695 1498 aa37.6■■■■□ 3.61
KRAS-201ENST00000256078 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
KRAS-201ENST00000256078 SMARCA4P51532 1647 aa37.45■■■■□ 3.59
KRAS-201ENST00000256078 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
KRAS-201ENST00000256078 HMGXB3Q12766 1538 aa37.32■■■■□ 3.57
KRAS-201ENST00000256078 BAZ1AQ9NRL2 1556 aaPredicted RBP37.31■■■■□ 3.56
KRAS-201ENST00000256078 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
KRAS-201ENST00000256078 MROH2BQ7Z745 1585 aa37.06■■■■□ 3.52
KRAS-201ENST00000256078 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
KRAS-201ENST00000256078 CUX2O14529 1486 aa36.82■■■■□ 3.48
KRAS-201ENST00000256078 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
KRAS-201ENST00000256078 NESP48681 1621 aa36.8■■■■□ 3.48
KRAS-201ENST00000256078 LAMC3Q9Y6N6 1575 aa36.63■■■■□ 3.45
KRAS-201ENST00000256078 WIZO95785 1651 aa36.54■■■■□ 3.44
KRAS-201ENST00000256078 DNAJC5Q9H3Z4 198 aa36.5■■■■□ 3.43
KRAS-201ENST00000256078 THOC2Q8NI27 1593 aaKnown RBP36.44■■■■□ 3.42
KRAS-201ENST00000256078 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
KRAS-201ENST00000256078 CADPSQ9ULU8 1353 aa36.41■■■■□ 3.42
KRAS-201ENST00000256078 PDS5BQ9NTI5 1447 aa36.39■■■■□ 3.42
KRAS-201ENST00000256078 KIF21AQ7Z4S6 1674 aa36.27■■■■□ 3.4
KRAS-201ENST00000256078 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
KRAS-201ENST00000256078 CFTRP13569 1480 aa36.09■■■■□ 3.37
KRAS-201ENST00000256078 MRC2Q9UBG0 1479 aa36.06■■■■□ 3.36
KRAS-201ENST00000256078 WDR62O43379 1518 aa36.03■■■■□ 3.36
KRAS-201ENST00000256078 FANCD2Q9BXW9 1451 aa35.94■■■■□ 3.34
KRAS-201ENST00000256078 CEP164Q9UPV0 1460 aa35.94■■■■□ 3.34
KRAS-201ENST00000256078 CCDC88BA6NC98 1476 aa35.77■■■■□ 3.32
KRAS-201ENST00000256078 URB2Q14146 1524 aaKnown RBP35.67■■■■□ 3.3
KRAS-201ENST00000256078 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
KRAS-201ENST00000256078 TOPBP1Q92547 1522 aa35.32■■■■□ 3.24
KRAS-201ENST00000256078 ABCC8Q09428 1581 aa35.26■■■■□ 3.24
KRAS-201ENST00000256078 IFT140Q96RY7 1462 aa35.26■■■■□ 3.23
KRAS-201ENST00000256078 DNMBPQ6XZF7 1577 aa35.2■■■■□ 3.23
KRAS-201ENST00000256078 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
KRAS-201ENST00000256078 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
KRAS-201ENST00000256078 TARBP1Q13395 1621 aaKnown RBP35.02■■■■□ 3.2
KRAS-201ENST00000256078 POLA1P09884 1462 aaPredicted RBP34.98■■■■□ 3.19
KRAS-201ENST00000256078 EIF4G3O43432 1585 aaKnown RBP34.96■■■■□ 3.19
KRAS-201ENST00000256078 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.17
KRAS-201ENST00000256078 CUX1P39880 1505 aa34.81■■■■□ 3.16
KRAS-201ENST00000256078 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
KRAS-201ENST00000256078 SOGA1O94964 1423 aa34.77■■■■□ 3.16
KRAS-201ENST00000256078 FGD5Q6ZNL6 1462 aa34.76■■■■□ 3.15
KRAS-201ENST00000256078 TRIM41Q8WV44 630 aa34.75■■■■□ 3.15
KRAS-201ENST00000256078 SUPT5HO00267 1087 aaKnown RBP34.72■■■■□ 3.15
KRAS-201ENST00000256078 WDR97A6NE52 1622 aa34.71■■■■□ 3.15
KRAS-201ENST00000256078 TDRD9Q8NDG6 1382 aaKnown RBP34.65■■■■□ 3.14
KRAS-201ENST00000256078 RIMBP3CA6NJZ7 1639 aa34.6■■■■□ 3.13
KRAS-201ENST00000256078 RIMBP3BA6NNM3 1639 aa34.6■■■■□ 3.13
KRAS-201ENST00000256078 RIMBP3Q9UFD9 1639 aa34.6■■■■□ 3.13
KRAS-201ENST00000256078 ARHGEF11O15085 1522 aa34.57■■■■□ 3.12
KRAS-201ENST00000256078 CHD1O14646 1710 aa34.56■■■■□ 3.12
KRAS-201ENST00000256078 SNAPC4Q5SXM2 1469 aa34.5■■■■□ 3.11
KRAS-201ENST00000256078 GRIN2BQ13224 1484 aa34.48■■■■□ 3.11
KRAS-201ENST00000256078 MAGI1Q96QZ7 1491 aaPredicted RBP34.48■■■■□ 3.11
KRAS-201ENST00000256078 ABCA10Q8WWZ4 1543 aa34.45■■■■□ 3.11
KRAS-201ENST00000256078 FBLN2P98095 1184 aa34.38■■■■□ 3.09
KRAS-201ENST00000256078 GAPVD1Q14C86 1478 aa34.37■■■■□ 3.09
KRAS-201ENST00000256078 ABCA5Q8WWZ7 1642 aa34.36■■■■□ 3.09
KRAS-201ENST00000256078 SYNJ2O15056 1496 aa34.35■■■■□ 3.09
KRAS-201ENST00000256078 CLASP1Q7Z460 1538 aa34.35■■■■□ 3.09
KRAS-201ENST00000256078 TOP2BQ02880 1626 aa34.32■■■■□ 3.08
KRAS-201ENST00000256078 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
KRAS-201ENST00000256078 BIVM-ERCC5R4GMW8 1640 aa34.3■■■■□ 3.08
KRAS-201ENST00000256078 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
KRAS-201ENST00000256078 CHMP7Q8WUX9 453 aaPredicted RBP34.27■■■■□ 3.08
KRAS-201ENST00000256078 SYNJ1O43426 1573 aa34.26■■■■□ 3.07
KRAS-201ENST00000256078 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
KRAS-201ENST00000256078 CYB5RLQ6IPT4 315 aa34.18■■■■□ 3.06
KRAS-201ENST00000256078 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
KRAS-201ENST00000256078 GRIN2AQ12879 1464 aa34.04■■■■□ 3.04
KRAS-201ENST00000256078 ERICH3Q5RHP9 1530 aa34.01■■■■□ 3.04
KRAS-201ENST00000256078 NUP160Q12769 1436 aa33.99■■■■□ 3.03
KRAS-201ENST00000256078 FHAD1B1AJZ9 1412 aa33.98■■■■□ 3.03
KRAS-201ENST00000256078 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
KRAS-201ENST00000256078 SHROOM2Q13796 1616 aa33.79■■■■□ 3
KRAS-201ENST00000256078 ERCC6L2Q5T890 1561 aa33.76■■■□□ 2.99
KRAS-201ENST00000256078 IGF1RP08069 1367 aa33.65■■■□□ 2.98
KRAS-201ENST00000256078 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
KRAS-201ENST00000256078 TRHP20396 242 aaPredicted RBP33.6■■■□□ 2.97
KRAS-201ENST00000256078 RUSC2Q8N2Y8 1516 aa33.58■■■□□ 2.97
KRAS-201ENST00000256078 PRG4Q92954 1404 aaPredicted RBP33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms