Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.22■□□□□ 0.19
SPTBN2O15020 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.22■□□□□ 0.19
SPTBN2O15020 GOLGA2P4-201ENST00000441462 777 ntBASIC16.22■□□□□ 0.19
SPTBN2O15020 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.22■□□□□ 0.19
SPTBN2O15020 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.22■□□□□ 0.19
SPTBN2O15020 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.22■□□□□ 0.19
SPTBN2O15020 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SPTBN2O15020 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SPTBN2O15020 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.22■□□□□ 0.19
SPTBN2O15020 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.22■□□□□ 0.19
SPTBN2O15020 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPTBN2O15020 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.22■□□□□ 0.19
SPTBN2O15020 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SPTBN2O15020 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPTBN2O15020 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.21■□□□□ 0.19
SPTBN2O15020 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SPTBN2O15020 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.21■□□□□ 0.19
SPTBN2O15020 AL844908.2-201ENST00000609461 460 ntBASIC16.21■□□□□ 0.19
SPTBN2O15020 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
SPTBN2O15020 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SPTBN2O15020 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPTBN2O15020 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.21■□□□□ 0.19
SPTBN2O15020 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SPTBN2O15020 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.21■□□□□ 0.19
SPTBN2O15020 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.21■□□□□ 0.19
SPTBN2O15020 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.21■□□□□ 0.19
SPTBN2O15020 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPTBN2O15020 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SPTBN2O15020 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.21■□□□□ 0.18
SPTBN2O15020 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SPTBN2O15020 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPTBN2O15020 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SPTBN2O15020 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 FXNP2-201ENST00000411625 547 ntBASIC16.2■□□□□ 0.18
SPTBN2O15020 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.2■□□□□ 0.18
SPTBN2O15020 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 AC109635.5-201ENST00000533593 962 ntBASIC16.2■□□□□ 0.18
SPTBN2O15020 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SPTBN2O15020 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SPTBN2O15020 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.2■□□□□ 0.18
SPTBN2O15020 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.2■□□□□ 0.18
SPTBN2O15020 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.2■□□□□ 0.18
SPTBN2O15020 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SPTBN2O15020 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.2■□□□□ 0.18
SPTBN2O15020 AC018529.1-201ENST00000613063 361 ntBASIC16.2■□□□□ 0.18
SPTBN2O15020 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SPTBN2O15020 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.2■□□□□ 0.18
SPTBN2O15020 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPTBN2O15020 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.19■□□□□ 0.18
SPTBN2O15020 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPTBN2O15020 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms