RNA–Protein interactions for RNA: ENST00000507348.5

SERF1A-205, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-205ENST00000507348 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
SERF1A-205ENST00000507348 CCDC180Q9P1Z9 1646 aa34.32■■■■□ 3.08
SERF1A-205ENST00000507348 ABCC9O60706 1549 aa33.88■■■■□ 3.01
SERF1A-205ENST00000507348 RB1CC1Q8TDY2 1594 aa32.46■■■□□ 2.79
SERF1A-205ENST00000507348 NACADO15069 1562 aa32.4■■■□□ 2.78
SERF1A-205ENST00000507348 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.74
SERF1A-205ENST00000507348 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
SERF1A-205ENST00000507348 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
SERF1A-205ENST00000507348 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
SERF1A-205ENST00000507348 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
SERF1A-205ENST00000507348 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
SERF1A-205ENST00000507348 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
SERF1A-205ENST00000507348 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
SERF1A-205ENST00000507348 DNAJC5BQ9UF47 199 aa31.56■■■□□ 2.64
SERF1A-205ENST00000507348 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
SERF1A-205ENST00000507348 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
SERF1A-205ENST00000507348 EIF4G1Q04637 1599 aaKnown RBP30.72■■■□□ 2.51
SERF1A-205ENST00000507348 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
SERF1A-205ENST00000507348 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
SERF1A-205ENST00000507348 CHIC1Q5VXU3 224 aa30.21■■■□□ 2.43
SERF1A-205ENST00000507348 NCAPD3P42695 1498 aa29.97■■■□□ 2.39
SERF1A-205ENST00000507348 SMARCA4P51532 1647 aa29.89■■■□□ 2.37
SERF1A-205ENST00000507348 ATAD2BQ9ULI0 1458 aa29.88■■■□□ 2.37
SERF1A-205ENST00000507348 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
SERF1A-205ENST00000507348 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
SERF1A-205ENST00000507348 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
SERF1A-205ENST00000507348 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.35
SERF1A-205ENST00000507348 MROH2BQ7Z745 1585 aa29.63■■■□□ 2.33
SERF1A-205ENST00000507348 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
SERF1A-205ENST00000507348 NESP48681 1621 aa29.25■■■□□ 2.27
SERF1A-205ENST00000507348 WIZO95785 1651 aa29.22■■■□□ 2.27
SERF1A-205ENST00000507348 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
SERF1A-205ENST00000507348 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
SERF1A-205ENST00000507348 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
SERF1A-205ENST00000507348 CUX2O14529 1486 aa29.13■■■□□ 2.25
SERF1A-205ENST00000507348 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
SERF1A-205ENST00000507348 PDS5BQ9NTI5 1447 aa28.96■■■□□ 2.23
SERF1A-205ENST00000507348 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
SERF1A-205ENST00000507348 THOC2Q8NI27 1593 aaKnown RBP28.89■■■□□ 2.22
SERF1A-205ENST00000507348 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
SERF1A-205ENST00000507348 CFTRP13569 1480 aa28.8■■■□□ 2.2
SERF1A-205ENST00000507348 DNAJC5Q9H3Z4 198 aa28.71■■■□□ 2.19
SERF1A-205ENST00000507348 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
SERF1A-205ENST00000507348 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.17
SERF1A-205ENST00000507348 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
SERF1A-205ENST00000507348 WDR62O43379 1518 aa28.63■■■□□ 2.17
SERF1A-205ENST00000507348 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
SERF1A-205ENST00000507348 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
SERF1A-205ENST00000507348 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
SERF1A-205ENST00000507348 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
SERF1A-205ENST00000507348 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
SERF1A-205ENST00000507348 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
SERF1A-205ENST00000507348 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
SERF1A-205ENST00000507348 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
SERF1A-205ENST00000507348 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
SERF1A-205ENST00000507348 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
SERF1A-205ENST00000507348 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.05
SERF1A-205ENST00000507348 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
SERF1A-205ENST00000507348 CUX1P39880 1505 aa27.82■■■□□ 2.04
SERF1A-205ENST00000507348 EIF4G3O43432 1585 aaKnown RBP27.78■■■□□ 2.04
SERF1A-205ENST00000507348 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.04
SERF1A-205ENST00000507348 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
SERF1A-205ENST00000507348 SOGA1O94964 1423 aa27.75■■■□□ 2.03
SERF1A-205ENST00000507348 FGD5Q6ZNL6 1462 aa27.75■■■□□ 2.03
SERF1A-205ENST00000507348 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
SERF1A-205ENST00000507348 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
SERF1A-205ENST00000507348 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
SERF1A-205ENST00000507348 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
SERF1A-205ENST00000507348 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
SERF1A-205ENST00000507348 WRNQ14191 1432 aaPredicted RBP eCLIP27.49■■□□□ 1.99
SERF1A-205ENST00000507348 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
SERF1A-205ENST00000507348 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
SERF1A-205ENST00000507348 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
SERF1A-205ENST00000507348 CHD1O14646 1710 aa27.45■■□□□ 1.99
SERF1A-205ENST00000507348 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.98
SERF1A-205ENST00000507348 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
SERF1A-205ENST00000507348 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
SERF1A-205ENST00000507348 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
SERF1A-205ENST00000507348 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
SERF1A-205ENST00000507348 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
SERF1A-205ENST00000507348 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
SERF1A-205ENST00000507348 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
SERF1A-205ENST00000507348 ARHGEF11O15085 1522 aa27.38■■□□□ 1.97
SERF1A-205ENST00000507348 FBLN2P98095 1184 aa27.38■■□□□ 1.97
SERF1A-205ENST00000507348 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
SERF1A-205ENST00000507348 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
SERF1A-205ENST00000507348 PBRM1Q86U86 1689 aa27.3■■□□□ 1.96
SERF1A-205ENST00000507348 CLASP1Q7Z460 1538 aa27.28■■□□□ 1.96
SERF1A-205ENST00000507348 ERICH3Q5RHP9 1530 aa27.16■■□□□ 1.94
SERF1A-205ENST00000507348 ARAP1Q96P48 1450 aa27.15■■□□□ 1.94
SERF1A-205ENST00000507348 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
SERF1A-205ENST00000507348 PHF23Q9BUL5 403 aaPredicted RBP27.14■■□□□ 1.94
SERF1A-205ENST00000507348 FHAD1B1AJZ9 1412 aa27.13■■□□□ 1.93
SERF1A-205ENST00000507348 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
SERF1A-205ENST00000507348 CYB5RLQ6IPT4 315 aa27.11■■□□□ 1.93
SERF1A-205ENST00000507348 NUP160Q12769 1436 aa27.09■■□□□ 1.93
SERF1A-205ENST00000507348 CEP170Q5SW79 1584 aa27■■□□□ 1.91
SERF1A-205ENST00000507348 IGF1RP08069 1367 aa26.96■■□□□ 1.91
SERF1A-205ENST00000507348 KIF27Q86VH2 1401 aa26.93■■□□□ 1.9
SERF1A-205ENST00000507348 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 239.6 ms