RNA–Protein interactions for RNA: ENST00000457722.6

NECAP2-203, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2 BASIC

Gene NECAP2, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-203ENST00000457722 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
NECAP2-203ENST00000457722 CCDC180Q9P1Z9 1646 aa34.86■■■■□ 3.17
NECAP2-203ENST00000457722 ABCC9O60706 1549 aa34.21■■■■□ 3.07
NECAP2-203ENST00000457722 RB1CC1Q8TDY2 1594 aa32.85■■■□□ 2.85
NECAP2-203ENST00000457722 NACADO15069 1562 aa32.78■■■□□ 2.84
NECAP2-203ENST00000457722 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
NECAP2-203ENST00000457722 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
NECAP2-203ENST00000457722 MYO15BQ96JP2 1530 aa32.52■■■□□ 2.8
NECAP2-203ENST00000457722 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
NECAP2-203ENST00000457722 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
NECAP2-203ENST00000457722 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
NECAP2-203ENST00000457722 PABPN1Q86U42 306 aaKnown RBP eCLIP31.93■■■□□ 2.7
NECAP2-203ENST00000457722 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
NECAP2-203ENST00000457722 SCRIBQ14160 1630 aa31.84■■■□□ 2.69
NECAP2-203ENST00000457722 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
NECAP2-203ENST00000457722 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
NECAP2-203ENST00000457722 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.54
NECAP2-203ENST00000457722 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
NECAP2-203ENST00000457722 SMARCA4P51532 1647 aa30.42■■■□□ 2.46
NECAP2-203ENST00000457722 BAZ1AQ9NRL2 1556 aaPredicted RBP30.35■■■□□ 2.45
NECAP2-203ENST00000457722 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
NECAP2-203ENST00000457722 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
NECAP2-203ENST00000457722 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
NECAP2-203ENST00000457722 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
NECAP2-203ENST00000457722 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
NECAP2-203ENST00000457722 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
NECAP2-203ENST00000457722 BAZ1BQ9UIG0 1483 aaKnown RBP30.01■■■□□ 2.4
NECAP2-203ENST00000457722 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
NECAP2-203ENST00000457722 WIZO95785 1651 aa29.88■■■□□ 2.37
NECAP2-203ENST00000457722 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
NECAP2-203ENST00000457722 NESP48681 1621 aa29.59■■■□□ 2.33
NECAP2-203ENST00000457722 TOP2AP11388 1531 aaKnown RBP29.54■■■□□ 2.32
NECAP2-203ENST00000457722 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
NECAP2-203ENST00000457722 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
NECAP2-203ENST00000457722 CADPSQ9ULU8 1353 aa29.35■■■□□ 2.29
NECAP2-203ENST00000457722 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
NECAP2-203ENST00000457722 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
NECAP2-203ENST00000457722 CUX2O14529 1486 aa29.19■■■□□ 2.26
NECAP2-203ENST00000457722 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
NECAP2-203ENST00000457722 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
NECAP2-203ENST00000457722 CFTRP13569 1480 aa29.17■■■□□ 2.26
NECAP2-203ENST00000457722 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
NECAP2-203ENST00000457722 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
NECAP2-203ENST00000457722 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
NECAP2-203ENST00000457722 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
NECAP2-203ENST00000457722 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
NECAP2-203ENST00000457722 WDR62O43379 1518 aa28.91■■■□□ 2.22
NECAP2-203ENST00000457722 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
NECAP2-203ENST00000457722 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
NECAP2-203ENST00000457722 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
NECAP2-203ENST00000457722 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
NECAP2-203ENST00000457722 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
NECAP2-203ENST00000457722 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
NECAP2-203ENST00000457722 CUX1P39880 1505 aa28.33■■■□□ 2.13
NECAP2-203ENST00000457722 POLA1P09884 1462 aaPredicted RBP28.32■■■□□ 2.12
NECAP2-203ENST00000457722 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
NECAP2-203ENST00000457722 TARBP1Q13395 1621 aaKnown RBP28.26■■■□□ 2.11
NECAP2-203ENST00000457722 FGD5Q6ZNL6 1462 aa28.25■■■□□ 2.11
NECAP2-203ENST00000457722 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
NECAP2-203ENST00000457722 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.11
NECAP2-203ENST00000457722 SOGA1O94964 1423 aa28.18■■■□□ 2.1
NECAP2-203ENST00000457722 AQRO60306 1485 aaKnown RBP eCLIP28.11■■■□□ 2.093e-7■■■■□ 19.8
NECAP2-203ENST00000457722 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.092e-6■■■■□ 22.3
NECAP2-203ENST00000457722 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
NECAP2-203ENST00000457722 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
NECAP2-203ENST00000457722 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
NECAP2-203ENST00000457722 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
NECAP2-203ENST00000457722 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
NECAP2-203ENST00000457722 ABCA10Q8WWZ4 1543 aa27.95■■■□□ 2.06
NECAP2-203ENST00000457722 OSCARQ8IYS5 282 aa27.92■■■□□ 2.06
NECAP2-203ENST00000457722 ABCA5Q8WWZ7 1642 aa27.88■■■□□ 2.05
NECAP2-203ENST00000457722 SNAPC4Q5SXM2 1469 aa27.88■■■□□ 2.05
NECAP2-203ENST00000457722 CHD1O14646 1710 aa27.87■■■□□ 2.05
NECAP2-203ENST00000457722 GRIN2BQ13224 1484 aa27.87■■■□□ 2.05
NECAP2-203ENST00000457722 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
NECAP2-203ENST00000457722 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
NECAP2-203ENST00000457722 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
NECAP2-203ENST00000457722 FBLN2P98095 1184 aa27.78■■■□□ 2.04
NECAP2-203ENST00000457722 SYNJ2O15056 1496 aa27.7■■■□□ 2.03
NECAP2-203ENST00000457722 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
NECAP2-203ENST00000457722 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
NECAP2-203ENST00000457722 RIMBP3CA6NJZ7 1639 aa27.61■■■□□ 2.01
NECAP2-203ENST00000457722 RIMBP3BA6NNM3 1639 aa27.61■■■□□ 2.01
NECAP2-203ENST00000457722 RIMBP3Q9UFD9 1639 aa27.61■■■□□ 2.01
NECAP2-203ENST00000457722 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
NECAP2-203ENST00000457722 CLASP1Q7Z460 1538 aa27.55■■■□□ 2
NECAP2-203ENST00000457722 ARHGEF11O15085 1522 aa27.54■■■□□ 2
NECAP2-203ENST00000457722 GRIN2AQ12879 1464 aa27.53■■■□□ 2
NECAP2-203ENST00000457722 FHAD1B1AJZ9 1412 aa27.53■■■□□ 2
NECAP2-203ENST00000457722 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
NECAP2-203ENST00000457722 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
NECAP2-203ENST00000457722 NUP160Q12769 1436 aa27.4■■□□□ 1.98
NECAP2-203ENST00000457722 IGF1RP08069 1367 aa27.38■■□□□ 1.97
NECAP2-203ENST00000457722 CUL7Q14999 1698 aa27.36■■□□□ 1.97
NECAP2-203ENST00000457722 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
NECAP2-203ENST00000457722 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.95
NECAP2-203ENST00000457722 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
NECAP2-203ENST00000457722 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
NECAP2-203ENST00000457722 SHROOM2Q13796 1616 aa27.22■■□□□ 1.95
NECAP2-203ENST00000457722 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms