RNA–Protein interactions for RNA: ENST00000601708.1

LINC01233-203, Transcript of long intergenic non-protein coding RNA 1233, humanhuman

TSL 3 BASIC

Gene LINC01233, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01233-203ENST00000601708 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
LINC01233-203ENST00000601708 ABCC9O60706 1549 aa33.72■■■□□ 2.99
LINC01233-203ENST00000601708 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
LINC01233-203ENST00000601708 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.74
LINC01233-203ENST00000601708 RB1CC1Q8TDY2 1594 aa31.94■■■□□ 2.7
LINC01233-203ENST00000601708 NACADO15069 1562 aa31.63■■■□□ 2.65
LINC01233-203ENST00000601708 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.6
LINC01233-203ENST00000601708 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
LINC01233-203ENST00000601708 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
LINC01233-203ENST00000601708 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
LINC01233-203ENST00000601708 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
LINC01233-203ENST00000601708 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
LINC01233-203ENST00000601708 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.47
LINC01233-203ENST00000601708 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
LINC01233-203ENST00000601708 ZCCHC6Q5VYS8 1495 aaKnown RBP30.47■■■□□ 2.47
LINC01233-203ENST00000601708 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
LINC01233-203ENST00000601708 EIF4G1Q04637 1599 aaKnown RBP30.31■■■□□ 2.44
LINC01233-203ENST00000601708 SCRIBQ14160 1630 aa30.26■■■□□ 2.44
LINC01233-203ENST00000601708 DNAJC5Q9H3Z4 198 aa29.87■■■□□ 2.37
LINC01233-203ENST00000601708 CUX2O14529 1486 aa29.3■■■□□ 2.28
LINC01233-203ENST00000601708 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
LINC01233-203ENST00000601708 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
LINC01233-203ENST00000601708 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
LINC01233-203ENST00000601708 HMGXB3Q12766 1538 aa28.94■■■□□ 2.22
LINC01233-203ENST00000601708 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
LINC01233-203ENST00000601708 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
LINC01233-203ENST00000601708 NESP48681 1621 aa28.86■■■□□ 2.21
LINC01233-203ENST00000601708 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
LINC01233-203ENST00000601708 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
LINC01233-203ENST00000601708 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
LINC01233-203ENST00000601708 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
LINC01233-203ENST00000601708 LAMC3Q9Y6N6 1575 aa28.62■■■□□ 2.17
LINC01233-203ENST00000601708 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
LINC01233-203ENST00000601708 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
LINC01233-203ENST00000601708 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
LINC01233-203ENST00000601708 CADPSQ9ULU8 1353 aa28.28■■■□□ 2.12
LINC01233-203ENST00000601708 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
LINC01233-203ENST00000601708 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
LINC01233-203ENST00000601708 WDR62O43379 1518 aa28.19■■■□□ 2.1
LINC01233-203ENST00000601708 WIZO95785 1651 aa28.06■■■□□ 2.08
LINC01233-203ENST00000601708 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
LINC01233-203ENST00000601708 FANCD2Q9BXW9 1451 aa27.93■■■□□ 2.06
LINC01233-203ENST00000601708 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
LINC01233-203ENST00000601708 CFTRP13569 1480 aa27.88■■■□□ 2.05
LINC01233-203ENST00000601708 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
LINC01233-203ENST00000601708 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
LINC01233-203ENST00000601708 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
LINC01233-203ENST00000601708 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
LINC01233-203ENST00000601708 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
LINC01233-203ENST00000601708 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
LINC01233-203ENST00000601708 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
LINC01233-203ENST00000601708 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
LINC01233-203ENST00000601708 ZNF608Q9ULD9 1512 aaPredicted RBP27.47■■□□□ 1.99
LINC01233-203ENST00000601708 ARHGEF11O15085 1522 aa27.42■■□□□ 1.98
LINC01233-203ENST00000601708 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
LINC01233-203ENST00000601708 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
LINC01233-203ENST00000601708 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
LINC01233-203ENST00000601708 EIF4G3O43432 1585 aaKnown RBP27.29■■□□□ 1.96
LINC01233-203ENST00000601708 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
LINC01233-203ENST00000601708 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
LINC01233-203ENST00000601708 CHD1O14646 1710 aa27.21■■□□□ 1.95
LINC01233-203ENST00000601708 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.95
LINC01233-203ENST00000601708 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.94
LINC01233-203ENST00000601708 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
LINC01233-203ENST00000601708 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
LINC01233-203ENST00000601708 TRHP20396 242 aaPredicted RBP27.03■■□□□ 1.92
LINC01233-203ENST00000601708 FBLN2P98095 1184 aa27.01■■□□□ 1.91
LINC01233-203ENST00000601708 RAD54L2Q9Y4B4 1467 aa26.94■■□□□ 1.9
LINC01233-203ENST00000601708 SOGA1O94964 1423 aa26.91■■□□□ 1.9
LINC01233-203ENST00000601708 TDRD9Q8NDG6 1382 aaKnown RBP26.91■■□□□ 1.9
LINC01233-203ENST00000601708 CLASP1Q7Z460 1538 aa26.9■■□□□ 1.9
LINC01233-203ENST00000601708 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
LINC01233-203ENST00000601708 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
LINC01233-203ENST00000601708 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
LINC01233-203ENST00000601708 MAGI1Q96QZ7 1491 aaPredicted RBP26.8■■□□□ 1.88
LINC01233-203ENST00000601708 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
LINC01233-203ENST00000601708 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
LINC01233-203ENST00000601708 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
LINC01233-203ENST00000601708 CUX1P39880 1505 aa26.72■■□□□ 1.87
LINC01233-203ENST00000601708 SYNJ2O15056 1496 aa26.71■■□□□ 1.87
LINC01233-203ENST00000601708 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
LINC01233-203ENST00000601708 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
LINC01233-203ENST00000601708 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
LINC01233-203ENST00000601708 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
LINC01233-203ENST00000601708 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
LINC01233-203ENST00000601708 ERCC6L2Q5T890 1561 aa26.41■■□□□ 1.82
LINC01233-203ENST00000601708 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
LINC01233-203ENST00000601708 NUP160Q12769 1436 aa26.35■■□□□ 1.81
LINC01233-203ENST00000601708 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
LINC01233-203ENST00000601708 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
LINC01233-203ENST00000601708 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
LINC01233-203ENST00000601708 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
LINC01233-203ENST00000601708 KIF13AQ9H1H9 1805 aa26.24■■□□□ 1.79
LINC01233-203ENST00000601708 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
LINC01233-203ENST00000601708 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
LINC01233-203ENST00000601708 TOP2BQ02880 1626 aa26.18■■□□□ 1.78
LINC01233-203ENST00000601708 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
LINC01233-203ENST00000601708 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
LINC01233-203ENST00000601708 JPH4Q96JJ6 628 aa26.07■■□□□ 1.76
LINC01233-203ENST00000601708 ABCC10Q5T3U5 1492 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms