RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.44
LINC01278-203ENST00000608788 AEBP2Q6ZN18 517 aaPredicted RBP34.18■■■■□ 3.06
LINC01278-203ENST00000608788 ABCC9O60706 1549 aa33.44■■■□□ 2.94
LINC01278-203ENST00000608788 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
LINC01278-203ENST00000608788 CHIC1Q5VXU3 224 aa32.81■■■□□ 2.84
LINC01278-203ENST00000608788 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
LINC01278-203ENST00000608788 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.65
LINC01278-203ENST00000608788 NACADO15069 1562 aa31.33■■■□□ 2.61
LINC01278-203ENST00000608788 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
LINC01278-203ENST00000608788 UNC13AQ9UPW8 1703 aa30.95■■■□□ 2.54
LINC01278-203ENST00000608788 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
LINC01278-203ENST00000608788 BICRAQ9NZM4 1560 aa30.82■■■□□ 2.52
LINC01278-203ENST00000608788 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
LINC01278-203ENST00000608788 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
LINC01278-203ENST00000608788 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
LINC01278-203ENST00000608788 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
LINC01278-203ENST00000608788 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
LINC01278-203ENST00000608788 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
LINC01278-203ENST00000608788 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
LINC01278-203ENST00000608788 SCRIBQ14160 1630 aa30■■■□□ 2.39
LINC01278-203ENST00000608788 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
LINC01278-203ENST00000608788 SENP3Q9H4L4 574 aaPredicted RBP29.14■■■□□ 2.26
LINC01278-203ENST00000608788 CUX2O14529 1486 aa29.07■■■□□ 2.24
LINC01278-203ENST00000608788 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
LINC01278-203ENST00000608788 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
LINC01278-203ENST00000608788 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
LINC01278-203ENST00000608788 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
LINC01278-203ENST00000608788 HMGXB3Q12766 1538 aa28.69■■■□□ 2.18
LINC01278-203ENST00000608788 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
LINC01278-203ENST00000608788 NESP48681 1621 aa28.62■■■□□ 2.17
LINC01278-203ENST00000608788 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
LINC01278-203ENST00000608788 THOC2Q8NI27 1593 aaKnown RBP28.46■■■□□ 2.15
LINC01278-203ENST00000608788 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
LINC01278-203ENST00000608788 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
LINC01278-203ENST00000608788 BAZ1AQ9NRL2 1556 aaPredicted RBP28.39■■■□□ 2.14
LINC01278-203ENST00000608788 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
LINC01278-203ENST00000608788 KIF21AQ7Z4S6 1674 aa28.22■■■□□ 2.11
LINC01278-203ENST00000608788 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
LINC01278-203ENST00000608788 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
LINC01278-203ENST00000608788 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
LINC01278-203ENST00000608788 MRC2Q9UBG0 1479 aa27.97■■■□□ 2.07
LINC01278-203ENST00000608788 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
LINC01278-203ENST00000608788 WDR62O43379 1518 aa27.97■■■□□ 2.07
LINC01278-203ENST00000608788 WIZO95785 1651 aa27.77■■■□□ 2.04
LINC01278-203ENST00000608788 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
LINC01278-203ENST00000608788 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
LINC01278-203ENST00000608788 CFTRP13569 1480 aa27.63■■■□□ 2.01
LINC01278-203ENST00000608788 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
LINC01278-203ENST00000608788 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
LINC01278-203ENST00000608788 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
LINC01278-203ENST00000608788 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
LINC01278-203ENST00000608788 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
LINC01278-203ENST00000608788 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
LINC01278-203ENST00000608788 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
LINC01278-203ENST00000608788 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
LINC01278-203ENST00000608788 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
LINC01278-203ENST00000608788 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
LINC01278-203ENST00000608788 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
LINC01278-203ENST00000608788 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
LINC01278-203ENST00000608788 CCDC88BA6NC98 1476 aa27.1■■□□□ 1.93
LINC01278-203ENST00000608788 FOXD1Q16676 465 aa27.09■■□□□ 1.93
LINC01278-203ENST00000608788 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
LINC01278-203ENST00000608788 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
LINC01278-203ENST00000608788 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
LINC01278-203ENST00000608788 CYB5RLQ6IPT4 315 aa26.96■■□□□ 1.91
LINC01278-203ENST00000608788 TARBP1Q13395 1621 aaKnown RBP26.96■■□□□ 1.91
LINC01278-203ENST00000608788 CHD1O14646 1710 aa26.93■■□□□ 1.9
LINC01278-203ENST00000608788 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
LINC01278-203ENST00000608788 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.9
LINC01278-203ENST00000608788 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
LINC01278-203ENST00000608788 TRHP20396 242 aaPredicted RBP26.74■■□□□ 1.87
LINC01278-203ENST00000608788 FBLN2P98095 1184 aa26.72■■□□□ 1.87
LINC01278-203ENST00000608788 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
LINC01278-203ENST00000608788 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
LINC01278-203ENST00000608788 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
LINC01278-203ENST00000608788 SOGA1O94964 1423 aa26.65■■□□□ 1.86
LINC01278-203ENST00000608788 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
LINC01278-203ENST00000608788 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
LINC01278-203ENST00000608788 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
LINC01278-203ENST00000608788 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
LINC01278-203ENST00000608788 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
LINC01278-203ENST00000608788 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
LINC01278-203ENST00000608788 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
LINC01278-203ENST00000608788 CUX1P39880 1505 aa26.49■■□□□ 1.83
LINC01278-203ENST00000608788 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
LINC01278-203ENST00000608788 PLPPR3Q6T4P5 718 aa26.38■■□□□ 1.81
LINC01278-203ENST00000608788 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
LINC01278-203ENST00000608788 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
LINC01278-203ENST00000608788 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
LINC01278-203ENST00000608788 ABCA10Q8WWZ4 1543 aa26.27■■□□□ 1.8
LINC01278-203ENST00000608788 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
LINC01278-203ENST00000608788 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
LINC01278-203ENST00000608788 NUP160Q12769 1436 aa26.14■■□□□ 1.77
LINC01278-203ENST00000608788 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
LINC01278-203ENST00000608788 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
LINC01278-203ENST00000608788 SHROOM2Q13796 1616 aa26.08■■□□□ 1.77
LINC01278-203ENST00000608788 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
LINC01278-203ENST00000608788 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
LINC01278-203ENST00000608788 KIF13AQ9H1H9 1805 aa25.96■■□□□ 1.75
LINC01278-203ENST00000608788 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms