RNA–Protein interactions for RNA: ENST00000554237.1

VASH1-203, Transcript of vasohibin 1, humanhuman

TSL 1 (best) BASIC

Gene VASH1, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASH1-203ENST00000554237 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
VASH1-203ENST00000554237 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
VASH1-203ENST00000554237 ABCC9O60706 1549 aa34.37■■■■□ 3.09
VASH1-203ENST00000554237 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
VASH1-203ENST00000554237 NACADO15069 1562 aa32.76■■■□□ 2.84
VASH1-203ENST00000554237 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
VASH1-203ENST00000554237 MYO15BQ96JP2 1530 aa32.47■■■□□ 2.79
VASH1-203ENST00000554237 ZCCHC6Q5VYS8 1495 aaKnown RBP32.35■■■□□ 2.77
VASH1-203ENST00000554237 DCAF1Q9Y4B6 1507 aa32.19■■■□□ 2.74
VASH1-203ENST00000554237 UNC13AQ9UPW8 1703 aa32.05■■■□□ 2.72
VASH1-203ENST00000554237 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.72
VASH1-203ENST00000554237 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
VASH1-203ENST00000554237 DNAJC5BQ9UF47 199 aa31.88■■■□□ 2.69
VASH1-203ENST00000554237 SCRIBQ14160 1630 aa31.66■■■□□ 2.66
VASH1-203ENST00000554237 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
VASH1-203ENST00000554237 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
VASH1-203ENST00000554237 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
VASH1-203ENST00000554237 CECR2Q9BXF3 1484 aa30.93■■■□□ 2.54
VASH1-203ENST00000554237 SMARCA4P51532 1647 aa30.26■■■□□ 2.43
VASH1-203ENST00000554237 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
VASH1-203ENST00000554237 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
VASH1-203ENST00000554237 BAZ1AQ9NRL2 1556 aaPredicted RBP30.18■■■□□ 2.42
VASH1-203ENST00000554237 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
VASH1-203ENST00000554237 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
VASH1-203ENST00000554237 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
VASH1-203ENST00000554237 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
VASH1-203ENST00000554237 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
VASH1-203ENST00000554237 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
VASH1-203ENST00000554237 NESP48681 1621 aa29.62■■■□□ 2.33
VASH1-203ENST00000554237 WIZO95785 1651 aa29.59■■■□□ 2.33
VASH1-203ENST00000554237 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
VASH1-203ENST00000554237 CUX2O14529 1486 aa29.5■■■□□ 2.31
VASH1-203ENST00000554237 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
VASH1-203ENST00000554237 CADPSQ9ULU8 1353 aa29.35■■■□□ 2.29
VASH1-203ENST00000554237 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
VASH1-203ENST00000554237 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
VASH1-203ENST00000554237 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.28
VASH1-203ENST00000554237 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
VASH1-203ENST00000554237 CFTRP13569 1480 aa29.1■■■□□ 2.25
VASH1-203ENST00000554237 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
VASH1-203ENST00000554237 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
VASH1-203ENST00000554237 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.24
VASH1-203ENST00000554237 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
VASH1-203ENST00000554237 WDR62O43379 1518 aa28.97■■■□□ 2.23
VASH1-203ENST00000554237 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
VASH1-203ENST00000554237 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
VASH1-203ENST00000554237 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
VASH1-203ENST00000554237 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
VASH1-203ENST00000554237 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
VASH1-203ENST00000554237 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
VASH1-203ENST00000554237 IFT140Q96RY7 1462 aa28.42■■■□□ 2.14
VASH1-203ENST00000554237 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
VASH1-203ENST00000554237 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
VASH1-203ENST00000554237 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
VASH1-203ENST00000554237 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.11
VASH1-203ENST00000554237 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
VASH1-203ENST00000554237 OSCARQ8IYS5 282 aa28.18■■■□□ 2.1
VASH1-203ENST00000554237 CUX1P39880 1505 aa28.13■■■□□ 2.09
VASH1-203ENST00000554237 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
VASH1-203ENST00000554237 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
VASH1-203ENST00000554237 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.09
VASH1-203ENST00000554237 SOGA1O94964 1423 aa28.1■■■□□ 2.09
VASH1-203ENST00000554237 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
VASH1-203ENST00000554237 WDR97A6NE52 1622 aa27.98■■■□□ 2.07
VASH1-203ENST00000554237 TRIM41Q8WV44 630 aa27.89■■■□□ 2.05
VASH1-203ENST00000554237 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
VASH1-203ENST00000554237 CHD1O14646 1710 aa27.84■■■□□ 2.05
VASH1-203ENST00000554237 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
VASH1-203ENST00000554237 ABCA10Q8WWZ4 1543 aa27.83■■■□□ 2.05
VASH1-203ENST00000554237 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.05
VASH1-203ENST00000554237 FBLN2P98095 1184 aa27.83■■■□□ 2.04
VASH1-203ENST00000554237 MAGI1Q96QZ7 1491 aaPredicted RBP27.8■■■□□ 2.04
VASH1-203ENST00000554237 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
VASH1-203ENST00000554237 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
VASH1-203ENST00000554237 BIVM-ERCC5R4GMW8 1640 aa27.77■■■□□ 2.04
VASH1-203ENST00000554237 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
VASH1-203ENST00000554237 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
VASH1-203ENST00000554237 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
VASH1-203ENST00000554237 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
VASH1-203ENST00000554237 ARHGEF11O15085 1522 aa27.74■■■□□ 2.03
VASH1-203ENST00000554237 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
VASH1-203ENST00000554237 SYNJ2O15056 1496 aa27.7■■■□□ 2.02
VASH1-203ENST00000554237 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
VASH1-203ENST00000554237 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
VASH1-203ENST00000554237 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
VASH1-203ENST00000554237 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
VASH1-203ENST00000554237 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
VASH1-203ENST00000554237 ERICH3Q5RHP9 1530 aa27.48■■□□□ 1.99
VASH1-203ENST00000554237 CYB5RLQ6IPT4 315 aa27.48■■□□□ 1.99
VASH1-203ENST00000554237 GRIN2AQ12879 1464 aa27.47■■□□□ 1.99
VASH1-203ENST00000554237 FHAD1B1AJZ9 1412 aa27.46■■□□□ 1.99
VASH1-203ENST00000554237 NUP160Q12769 1436 aa27.39■■□□□ 1.97
VASH1-203ENST00000554237 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
VASH1-203ENST00000554237 KIF27Q86VH2 1401 aa27.27■■□□□ 1.96
VASH1-203ENST00000554237 IGF1RP08069 1367 aa27.2■■□□□ 1.95
VASH1-203ENST00000554237 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
VASH1-203ENST00000554237 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
VASH1-203ENST00000554237 CUL7Q14999 1698 aa27.14■■□□□ 1.93
VASH1-203ENST00000554237 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
VASH1-203ENST00000554237 JPH4Q96JJ6 628 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms