RNA–Protein interactions for RNA: ENST00000300051.8

LDHD-201, Transcript of lactate dehydrogenase D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDHD, Length 2,067 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHD-201ENST00000300051 NISCHQ9Y2I1 1504 aa42.06■■■■■ 4.32
LDHD-201ENST00000300051 CCDC180Q9P1Z9 1646 aa36.27■■■■□ 3.4
LDHD-201ENST00000300051 ZCCHC6Q5VYS8 1495 aaKnown RBP35.47■■■■□ 3.27
LDHD-201ENST00000300051 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
LDHD-201ENST00000300051 DCAF1Q9Y4B6 1507 aa34.73■■■■□ 3.15
LDHD-201ENST00000300051 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
LDHD-201ENST00000300051 MYO15BQ96JP2 1530 aa34.02■■■■□ 3.04
LDHD-201ENST00000300051 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
LDHD-201ENST00000300051 ABCC9O60706 1549 aa33.72■■■□□ 2.99
LDHD-201ENST00000300051 NACADO15069 1562 aa33.62■■■□□ 2.97
LDHD-201ENST00000300051 SCRIBQ14160 1630 aa33.55■■■□□ 2.96
LDHD-201ENST00000300051 RB1CC1Q8TDY2 1594 aa33.16■■■□□ 2.9
LDHD-201ENST00000300051 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
LDHD-201ENST00000300051 CHIC1Q5VXU3 224 aa32.91■■■□□ 2.86
LDHD-201ENST00000300051 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
LDHD-201ENST00000300051 UNC13AQ9UPW8 1703 aa32.59■■■□□ 2.81
LDHD-201ENST00000300051 MROH2BQ7Z745 1585 aa32.55■■■□□ 2.8
LDHD-201ENST00000300051 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
LDHD-201ENST00000300051 WIZO95785 1651 aa32.34■■■□□ 2.77
LDHD-201ENST00000300051 BICRAQ9NZM4 1560 aa32.19■■■□□ 2.74
LDHD-201ENST00000300051 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
LDHD-201ENST00000300051 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
LDHD-201ENST00000300051 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
LDHD-201ENST00000300051 TRIM41Q8WV44 630 aa31.88■■■□□ 2.69
LDHD-201ENST00000300051 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.67
LDHD-201ENST00000300051 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
LDHD-201ENST00000300051 SMARCA2P51531 1590 aa31.72■■■□□ 2.67
LDHD-201ENST00000300051 LOC105371045A0A1W2PR82 267 aa31.72■■■□□ 2.67
LDHD-201ENST00000300051 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.66
LDHD-201ENST00000300051 ATAD2BQ9ULI0 1458 aa31.46■■■□□ 2.63
LDHD-201ENST00000300051 FAM9AQ8IZU1 332 aaPredicted RBP31.36■■■□□ 2.61
LDHD-201ENST00000300051 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
LDHD-201ENST00000300051 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
LDHD-201ENST00000300051 PCGF6Q9BYE7 350 aa31.08■■■□□ 2.57
LDHD-201ENST00000300051 HMGXB3Q12766 1538 aa31.05■■■□□ 2.56
LDHD-201ENST00000300051 NCAPD3P42695 1498 aa31.05■■■□□ 2.56
LDHD-201ENST00000300051 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
LDHD-201ENST00000300051 EHMT2Q96KQ7 1210 aa30.92■■■□□ 2.54
LDHD-201ENST00000300051 EEA1Q15075 1411 aa30.9■■■□□ 2.54
LDHD-201ENST00000300051 SOGA1O94964 1423 aa30.88■■■□□ 2.53
LDHD-201ENST00000300051 TRIM26Q12899 539 aaPredicted RBP30.85■■■□□ 2.53
LDHD-201ENST00000300051 SYNJ1O43426 1573 aa30.84■■■□□ 2.53
LDHD-201ENST00000300051 HRCP23327 699 aa30.78■■■□□ 2.52
LDHD-201ENST00000300051 RUSC2Q8N2Y8 1516 aa30.72■■■□□ 2.51
LDHD-201ENST00000300051 CSRNP3Q8WYN3 585 aa30.71■■■□□ 2.51
LDHD-201ENST00000300051 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
LDHD-201ENST00000300051 TNIKQ9UKE5 1360 aa30.59■■■□□ 2.49
LDHD-201ENST00000300051 CFTRP13569 1480 aa30.58■■■□□ 2.49
LDHD-201ENST00000300051 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
LDHD-201ENST00000300051 GOLGA3Q08378 1498 aa30.54■■■□□ 2.48
LDHD-201ENST00000300051 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
LDHD-201ENST00000300051 CEP162Q5TB80 1403 aa30.51■■■□□ 2.47
LDHD-201ENST00000300051 KIF21BO75037 1637 aa30.48■■■□□ 2.47
LDHD-201ENST00000300051 CEP164Q9UPV0 1460 aa30.46■■■□□ 2.47
LDHD-201ENST00000300051 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
LDHD-201ENST00000300051 UBTFP17480 764 aaKnown RBP30.42■■■□□ 2.46
LDHD-201ENST00000300051 CUX1P39880 1505 aa30.38■■■□□ 2.45
LDHD-201ENST00000300051 CADPSQ9ULU8 1353 aa30.32■■■□□ 2.44
LDHD-201ENST00000300051 RAPGEF2Q9Y4G8 1499 aa30.21■■■□□ 2.43
LDHD-201ENST00000300051 PPARGC1BQ86YN6 1023 aaKnown RBP30.19■■■□□ 2.42
LDHD-201ENST00000300051 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
LDHD-201ENST00000300051 KIF27Q86VH2 1401 aa30.12■■■□□ 2.41
LDHD-201ENST00000300051 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
LDHD-201ENST00000300051 CLIP1P30622 1438 aa30.09■■■□□ 2.41
LDHD-201ENST00000300051 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
LDHD-201ENST00000300051 ZEB1P37275 1124 aaPredicted RBP29.99■■■□□ 2.39
LDHD-201ENST00000300051 VPS8Q8N3P4 1428 aa29.93■■■□□ 2.38
LDHD-201ENST00000300051 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
LDHD-201ENST00000300051 CUX2O14529 1486 aa29.89■■■□□ 2.38
LDHD-201ENST00000300051 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
LDHD-201ENST00000300051 NESP48681 1621 aa29.85■■■□□ 2.37
LDHD-201ENST00000300051 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
LDHD-201ENST00000300051 TTBK1Q5TCY1 1321 aaPredicted RBP29.8■■■□□ 2.36
LDHD-201ENST00000300051 IGF1RP08069 1367 aa29.79■■■□□ 2.36
LDHD-201ENST00000300051 TOPBP1Q92547 1522 aa29.76■■■□□ 2.35
LDHD-201ENST00000300051 RANGAP1P46060 587 aaPredicted RBP29.73■■■□□ 2.35
LDHD-201ENST00000300051 ARAP1Q96P48 1450 aa29.7■■■□□ 2.34
LDHD-201ENST00000300051 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
LDHD-201ENST00000300051 APLP2Q06481 763 aa29.67■■■□□ 2.34
LDHD-201ENST00000300051 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
LDHD-201ENST00000300051 CARMIL1Q5VZK9 1371 aa29.65■■■□□ 2.34
LDHD-201ENST00000300051 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
LDHD-201ENST00000300051 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
LDHD-201ENST00000300051 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
LDHD-201ENST00000300051 DNAJC5BQ9UF47 199 aa29.57■■■□□ 2.32
LDHD-201ENST00000300051 ARHGAP35Q9NRY4 1499 aa29.56■■■□□ 2.32
LDHD-201ENST00000300051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.56■■■□□ 2.32
LDHD-201ENST00000300051 CCER1Q8TC90 406 aaPredicted RBP29.52■■■□□ 2.32
LDHD-201ENST00000300051 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
LDHD-201ENST00000300051 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
LDHD-201ENST00000300051 CUL7Q14999 1698 aa29.47■■■□□ 2.31
LDHD-201ENST00000300051 ABCA5Q8WWZ7 1642 aa29.36■■■□□ 2.29
LDHD-201ENST00000300051 KANK4Q5T7N3 995 aaPredicted RBP29.3■■■□□ 2.28
LDHD-201ENST00000300051 GAPVD1Q14C86 1478 aa29.28■■■□□ 2.28
LDHD-201ENST00000300051 CTTNBP2Q8WZ74 1663 aa29.27■■■□□ 2.28
LDHD-201ENST00000300051 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.28
LDHD-201ENST00000300051 HNRNPUL2Q1KMD3 747 aaKnown RBP29.26■■■□□ 2.27
LDHD-201ENST00000300051 TARBP1Q13395 1621 aaKnown RBP29.25■■■□□ 2.27
LDHD-201ENST00000300051 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
LDHD-201ENST00000300051 EFCAB5A4FU69 1503 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms