RNA–Protein interactions for RNA: ENST00000525131.5

PDZD3-203, Transcript of PDZ domain containing 3, humanhuman

TSL 2 BASIC

Gene PDZD3, Length 1,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-203ENST00000525131 NISCHQ9Y2I1 1504 aa42.37■■■■■ 4.37
PDZD3-203ENST00000525131 CCDC180Q9P1Z9 1646 aa36.78■■■■□ 3.48
PDZD3-203ENST00000525131 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
PDZD3-203ENST00000525131 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
PDZD3-203ENST00000525131 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
PDZD3-203ENST00000525131 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
PDZD3-203ENST00000525131 MYO15BQ96JP2 1530 aa34.55■■■■□ 3.12
PDZD3-203ENST00000525131 ABCC9O60706 1549 aa34.37■■■■□ 3.09
PDZD3-203ENST00000525131 NACADO15069 1562 aa34.17■■■■□ 3.06
PDZD3-203ENST00000525131 SCRIBQ14160 1630 aa33.8■■■■□ 3
PDZD3-203ENST00000525131 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
PDZD3-203ENST00000525131 SUPT5HO00267 1087 aaKnown RBP33.55■■■□□ 2.96
PDZD3-203ENST00000525131 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
PDZD3-203ENST00000525131 RSF1Q96T23 1441 aaPredicted RBP33.01■■■□□ 2.88
PDZD3-203ENST00000525131 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
PDZD3-203ENST00000525131 BICRAQ9NZM4 1560 aa32.78■■■□□ 2.84
PDZD3-203ENST00000525131 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
PDZD3-203ENST00000525131 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
PDZD3-203ENST00000525131 CHIC1Q5VXU3 224 aa32.63■■■□□ 2.81
PDZD3-203ENST00000525131 SMARCA4P51532 1647 aa32.48■■■□□ 2.79
PDZD3-203ENST00000525131 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
PDZD3-203ENST00000525131 WIZO95785 1651 aa32.46■■■□□ 2.79
PDZD3-203ENST00000525131 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
PDZD3-203ENST00000525131 PEG3Q9GZU2 1588 aa32.13■■■□□ 2.73
PDZD3-203ENST00000525131 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
PDZD3-203ENST00000525131 ATAD2BQ9ULI0 1458 aa31.87■■■□□ 2.69
PDZD3-203ENST00000525131 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
PDZD3-203ENST00000525131 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
PDZD3-203ENST00000525131 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
PDZD3-203ENST00000525131 NCAPD3P42695 1498 aa31.55■■■□□ 2.64
PDZD3-203ENST00000525131 TRIM41Q8WV44 630 aa31.55■■■□□ 2.64
PDZD3-203ENST00000525131 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
PDZD3-203ENST00000525131 LOC105371045A0A1W2PR82 267 aa31.33■■■□□ 2.61
PDZD3-203ENST00000525131 ABCC8Q09428 1581 aa31.25■■■□□ 2.59
PDZD3-203ENST00000525131 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
PDZD3-203ENST00000525131 WRNQ14191 1432 aaPredicted RBP eCLIP31.04■■■□□ 2.56
PDZD3-203ENST00000525131 CFTRP13569 1480 aa30.95■■■□□ 2.54
PDZD3-203ENST00000525131 FAM9AQ8IZU1 332 aaPredicted RBP30.93■■■□□ 2.54
PDZD3-203ENST00000525131 PCGF6Q9BYE7 350 aa30.92■■■□□ 2.54
PDZD3-203ENST00000525131 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
PDZD3-203ENST00000525131 HRCP23327 699 aa30.86■■■□□ 2.53
PDZD3-203ENST00000525131 EEA1Q15075 1411 aa30.82■■■□□ 2.52
PDZD3-203ENST00000525131 PRDM2Q13029 1718 aa30.79■■■□□ 2.52
PDZD3-203ENST00000525131 TRIM26Q12899 539 aaPredicted RBP30.79■■■□□ 2.52
PDZD3-203ENST00000525131 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
PDZD3-203ENST00000525131 SOGA1O94964 1423 aa30.76■■■□□ 2.51
PDZD3-203ENST00000525131 CADPSQ9ULU8 1353 aa30.74■■■□□ 2.51
PDZD3-203ENST00000525131 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
PDZD3-203ENST00000525131 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
PDZD3-203ENST00000525131 CUX1P39880 1505 aa30.59■■■□□ 2.49
PDZD3-203ENST00000525131 CSRNP3Q8WYN3 585 aa30.57■■■□□ 2.48
PDZD3-203ENST00000525131 EHMT2Q96KQ7 1210 aa30.41■■■□□ 2.46
PDZD3-203ENST00000525131 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
PDZD3-203ENST00000525131 KIF21BO75037 1637 aa30.4■■■□□ 2.46
PDZD3-203ENST00000525131 LAMC3Q9Y6N6 1575 aa30.39■■■□□ 2.46
PDZD3-203ENST00000525131 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
PDZD3-203ENST00000525131 GOLGA3Q08378 1498 aa30.38■■■□□ 2.45
PDZD3-203ENST00000525131 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
PDZD3-203ENST00000525131 NESP48681 1621 aa30.32■■■□□ 2.44
PDZD3-203ENST00000525131 CEP162Q5TB80 1403 aa30.29■■■□□ 2.44
PDZD3-203ENST00000525131 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
PDZD3-203ENST00000525131 KIF27Q86VH2 1401 aa30.21■■■□□ 2.43
PDZD3-203ENST00000525131 DNMBPQ6XZF7 1577 aa30.19■■■□□ 2.42
PDZD3-203ENST00000525131 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
PDZD3-203ENST00000525131 PRXQ9BXM0 1461 aa30.15■■■□□ 2.42
PDZD3-203ENST00000525131 UBTFP17480 764 aaKnown RBP30.14■■■□□ 2.42
PDZD3-203ENST00000525131 ZEB1P37275 1124 aaPredicted RBP30.14■■■□□ 2.42
PDZD3-203ENST00000525131 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
PDZD3-203ENST00000525131 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
PDZD3-203ENST00000525131 PDS5BQ9NTI5 1447 aa30.12■■■□□ 2.41
PDZD3-203ENST00000525131 TOPBP1Q92547 1522 aa30.11■■■□□ 2.41
PDZD3-203ENST00000525131 CUX2O14529 1486 aa30.03■■■□□ 2.4
PDZD3-203ENST00000525131 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
PDZD3-203ENST00000525131 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
PDZD3-203ENST00000525131 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
PDZD3-203ENST00000525131 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
PDZD3-203ENST00000525131 IGF1RP08069 1367 aa29.93■■■□□ 2.38
PDZD3-203ENST00000525131 CLIP1P30622 1438 aa29.88■■■□□ 2.37
PDZD3-203ENST00000525131 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
PDZD3-203ENST00000525131 PPARGC1BQ86YN6 1023 aaKnown RBP29.84■■■□□ 2.37
PDZD3-203ENST00000525131 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
PDZD3-203ENST00000525131 CARMIL1Q5VZK9 1371 aa29.76■■■□□ 2.35
PDZD3-203ENST00000525131 VPS8Q8N3P4 1428 aa29.76■■■□□ 2.35
PDZD3-203ENST00000525131 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
PDZD3-203ENST00000525131 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
PDZD3-203ENST00000525131 CUL7Q14999 1698 aa29.66■■■□□ 2.34
PDZD3-203ENST00000525131 TARBP1Q13395 1621 aaKnown RBP29.65■■■□□ 2.34
PDZD3-203ENST00000525131 WDR62O43379 1518 aa29.58■■■□□ 2.33
PDZD3-203ENST00000525131 ARAP1Q96P48 1450 aa29.58■■■□□ 2.33
PDZD3-203ENST00000525131 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
PDZD3-203ENST00000525131 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
PDZD3-203ENST00000525131 ARHGAP35Q9NRY4 1499 aa29.51■■■□□ 2.31
PDZD3-203ENST00000525131 APLP2Q06481 763 aa29.46■■■□□ 2.31
PDZD3-203ENST00000525131 RANGAP1P46060 587 aaPredicted RBP29.45■■■□□ 2.31
PDZD3-203ENST00000525131 IFT140Q96RY7 1462 aa29.43■■■□□ 2.3
PDZD3-203ENST00000525131 ERCC6Q03468 1493 aa29.4■■■□□ 2.3
PDZD3-203ENST00000525131 THOC2Q8NI27 1593 aaKnown RBP29.4■■■□□ 2.3
PDZD3-203ENST00000525131 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.3
PDZD3-203ENST00000525131 CTTNBP2Q8WZ74 1663 aa29.37■■■□□ 2.29
PDZD3-203ENST00000525131 PBRM1Q86U86 1689 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms