RNA–Protein interactions for RNA: ENST00000602142.5

VAV1-210, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV1, Length 2,620 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-210ENST00000602142 NISCHQ9Y2I1 1504 aa41.22■■■■■ 4.19
VAV1-210ENST00000602142 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
VAV1-210ENST00000602142 ZCCHC6Q5VYS8 1495 aaKnown RBP34.79■■■■□ 3.16
VAV1-210ENST00000602142 SHROOM4Q9ULL8 1493 aa34.72■■■■□ 3.15
VAV1-210ENST00000602142 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
VAV1-210ENST00000602142 ABCC9O60706 1549 aa34.12■■■■□ 3.05
VAV1-210ENST00000602142 DCAF1Q9Y4B6 1507 aa33.88■■■■□ 3.01
VAV1-210ENST00000602142 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
VAV1-210ENST00000602142 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
VAV1-210ENST00000602142 NACADO15069 1562 aa33.18■■■□□ 2.9
VAV1-210ENST00000602142 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
VAV1-210ENST00000602142 SCRIBQ14160 1630 aa32.93■■■□□ 2.86
VAV1-210ENST00000602142 CHIC1Q5VXU3 224 aa32.76■■■□□ 2.84
VAV1-210ENST00000602142 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
VAV1-210ENST00000602142 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
VAV1-210ENST00000602142 CECR2Q9BXF3 1484 aa32.14■■■□□ 2.74
VAV1-210ENST00000602142 PABPN1Q86U42 306 aaKnown RBP eCLIP32.08■■■□□ 2.73
VAV1-210ENST00000602142 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
VAV1-210ENST00000602142 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.71
VAV1-210ENST00000602142 WIZO95785 1651 aa31.82■■■□□ 2.68
VAV1-210ENST00000602142 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
VAV1-210ENST00000602142 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.67
VAV1-210ENST00000602142 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
VAV1-210ENST00000602142 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
VAV1-210ENST00000602142 TOP2AP11388 1531 aaKnown RBP31.34■■■□□ 2.61
VAV1-210ENST00000602142 FAM9AQ8IZU1 332 aaPredicted RBP31.28■■■□□ 2.6
VAV1-210ENST00000602142 PCGF6Q9BYE7 350 aa31.27■■■□□ 2.6
VAV1-210ENST00000602142 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
VAV1-210ENST00000602142 CCDC88BA6NC98 1476 aa31.17■■■□□ 2.58
VAV1-210ENST00000602142 SMARCA2P51531 1590 aa31.15■■■□□ 2.58
VAV1-210ENST00000602142 HRCP23327 699 aa31■■■□□ 2.55
VAV1-210ENST00000602142 EHMT2Q96KQ7 1210 aa30.98■■■□□ 2.55
VAV1-210ENST00000602142 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
VAV1-210ENST00000602142 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
VAV1-210ENST00000602142 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
VAV1-210ENST00000602142 TRIM26Q12899 539 aaPredicted RBP30.82■■■□□ 2.52
VAV1-210ENST00000602142 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
VAV1-210ENST00000602142 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
VAV1-210ENST00000602142 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
VAV1-210ENST00000602142 NCAPD3P42695 1498 aa30.64■■■□□ 2.49
VAV1-210ENST00000602142 SOGA1O94964 1423 aa30.55■■■□□ 2.48
VAV1-210ENST00000602142 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
VAV1-210ENST00000602142 WRNQ14191 1432 aaPredicted RBP eCLIP30.48■■■□□ 2.47
VAV1-210ENST00000602142 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
VAV1-210ENST00000602142 PPARGC1BQ86YN6 1023 aaKnown RBP30.39■■■□□ 2.45
VAV1-210ENST00000602142 EEA1Q15075 1411 aa30.38■■■□□ 2.45
VAV1-210ENST00000602142 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
VAV1-210ENST00000602142 CSRNP3Q8WYN3 585 aa30.35■■■□□ 2.45
VAV1-210ENST00000602142 TNIKQ9UKE5 1360 aa30.23■■■□□ 2.43
VAV1-210ENST00000602142 CEP162Q5TB80 1403 aa30.22■■■□□ 2.43
VAV1-210ENST00000602142 UBTFP17480 764 aaKnown RBP30.16■■■□□ 2.42
VAV1-210ENST00000602142 GOLGA3Q08378 1498 aa30.13■■■□□ 2.41
VAV1-210ENST00000602142 TOP2BQ02880 1626 aa30.05■■■□□ 2.4
VAV1-210ENST00000602142 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.39
VAV1-210ENST00000602142 KIF21BO75037 1637 aa29.99■■■□□ 2.39
VAV1-210ENST00000602142 ZEB1P37275 1124 aaPredicted RBP29.96■■■□□ 2.39
VAV1-210ENST00000602142 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
VAV1-210ENST00000602142 CFTRP13569 1480 aa29.89■■■□□ 2.38
VAV1-210ENST00000602142 TTBK1Q5TCY1 1321 aaPredicted RBP29.88■■■□□ 2.37
VAV1-210ENST00000602142 RAPGEF2Q9Y4G8 1499 aa29.83■■■□□ 2.37
VAV1-210ENST00000602142 CUX1P39880 1505 aa29.83■■■□□ 2.37
VAV1-210ENST00000602142 CADPSQ9ULU8 1353 aa29.82■■■□□ 2.37
VAV1-210ENST00000602142 NESP48681 1621 aa29.77■■■□□ 2.36
VAV1-210ENST00000602142 CLIP1P30622 1438 aa29.75■■■□□ 2.35
VAV1-210ENST00000602142 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
VAV1-210ENST00000602142 PRDM2Q13029 1718 aa29.69■■■□□ 2.34
VAV1-210ENST00000602142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.65■■■□□ 2.34
VAV1-210ENST00000602142 PRXQ9BXM0 1461 aa29.62■■■□□ 2.33
VAV1-210ENST00000602142 RANGAP1P46060 587 aaPredicted RBP29.62■■■□□ 2.33
VAV1-210ENST00000602142 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
VAV1-210ENST00000602142 KIF27Q86VH2 1401 aa29.58■■■□□ 2.33
VAV1-210ENST00000602142 VPS8Q8N3P4 1428 aa29.58■■■□□ 2.33
VAV1-210ENST00000602142 CCER1Q8TC90 406 aaPredicted RBP29.55■■■□□ 2.32
VAV1-210ENST00000602142 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
VAV1-210ENST00000602142 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
VAV1-210ENST00000602142 APLP2Q06481 763 aa29.4■■■□□ 2.3
VAV1-210ENST00000602142 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
VAV1-210ENST00000602142 CUX2O14529 1486 aa29.38■■■□□ 2.29
VAV1-210ENST00000602142 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
VAV1-210ENST00000602142 ARAP1Q96P48 1450 aa29.34■■■□□ 2.29
VAV1-210ENST00000602142 ERCC6Q03468 1493 aa29.31■■■□□ 2.28
VAV1-210ENST00000602142 IGF1RP08069 1367 aa29.3■■■□□ 2.28
VAV1-210ENST00000602142 HNRNPUL2Q1KMD3 747 aaKnown RBP29.22■■■□□ 2.27
VAV1-210ENST00000602142 CARMIL1Q5VZK9 1371 aa29.16■■■□□ 2.26
VAV1-210ENST00000602142 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
VAV1-210ENST00000602142 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
VAV1-210ENST00000602142 ARHGAP35Q9NRY4 1499 aa29.16■■■□□ 2.26
VAV1-210ENST00000602142 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.26
VAV1-210ENST00000602142 TOPBP1Q92547 1522 aa29.12■■■□□ 2.25
VAV1-210ENST00000602142 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
VAV1-210ENST00000602142 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
VAV1-210ENST00000602142 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
VAV1-210ENST00000602142 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
VAV1-210ENST00000602142 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
VAV1-210ENST00000602142 WDR62O43379 1518 aa29■■■□□ 2.23
VAV1-210ENST00000602142 RRBP1Q9P2E9 1410 aaKnown RBP28.83■■■□□ 2.21
VAV1-210ENST00000602142 CUL7Q14999 1698 aa28.82■■■□□ 2.2
VAV1-210ENST00000602142 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
VAV1-210ENST00000602142 P3H3Q8IVL6 736 aa28.79■■■□□ 2.2
VAV1-210ENST00000602142 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms