RNA–Protein interactions for RNA: ENST00000520601.5

BRF2-202, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3 BASIC

Gene BRF2, Length 1,192 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-202ENST00000520601 NISCHQ9Y2I1 1504 aa38.24■■■■□ 3.71
BRF2-202ENST00000520601 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
BRF2-202ENST00000520601 ABCC9O60706 1549 aa33.93■■■■□ 3.02
BRF2-202ENST00000520601 RB1CC1Q8TDY2 1594 aa32.46■■■□□ 2.79
BRF2-202ENST00000520601 NACADO15069 1562 aa32.29■■■□□ 2.76
BRF2-202ENST00000520601 DCAF8L2P0C7V8 631 aa31.97■■■□□ 2.71
BRF2-202ENST00000520601 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.7
BRF2-202ENST00000520601 UNC13AQ9UPW8 1703 aa31.81■■■□□ 2.68
BRF2-202ENST00000520601 ZCCHC6Q5VYS8 1495 aaKnown RBP31.8■■■□□ 2.68
BRF2-202ENST00000520601 DCAF1Q9Y4B6 1507 aa31.64■■■□□ 2.66
BRF2-202ENST00000520601 DNAJC5BQ9UF47 199 aa31.54■■■□□ 2.64
BRF2-202ENST00000520601 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
BRF2-202ENST00000520601 BICRAQ9NZM4 1560 aa31.51■■■□□ 2.64
BRF2-202ENST00000520601 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
BRF2-202ENST00000520601 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
BRF2-202ENST00000520601 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
BRF2-202ENST00000520601 CC2D2AQ9P2K1 1620 aa30.71■■■□□ 2.51
BRF2-202ENST00000520601 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
BRF2-202ENST00000520601 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
BRF2-202ENST00000520601 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
BRF2-202ENST00000520601 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
BRF2-202ENST00000520601 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
BRF2-202ENST00000520601 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
BRF2-202ENST00000520601 HMGXB3Q12766 1538 aa29.65■■■□□ 2.34
BRF2-202ENST00000520601 PEG3Q9GZU2 1588 aa29.54■■■□□ 2.32
BRF2-202ENST00000520601 BAZ1BQ9UIG0 1483 aaKnown RBP29.47■■■□□ 2.31
BRF2-202ENST00000520601 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
BRF2-202ENST00000520601 ERCC6Q03468 1493 aa29.28■■■□□ 2.28
BRF2-202ENST00000520601 NESP48681 1621 aa29.23■■■□□ 2.27
BRF2-202ENST00000520601 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
BRF2-202ENST00000520601 CUX2O14529 1486 aa29.17■■■□□ 2.26
BRF2-202ENST00000520601 WIZO95785 1651 aa29.16■■■□□ 2.26
BRF2-202ENST00000520601 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
BRF2-202ENST00000520601 THOC2Q8NI27 1593 aaKnown RBP28.98■■■□□ 2.23
BRF2-202ENST00000520601 KIF21AQ7Z4S6 1674 aa28.95■■■□□ 2.22
BRF2-202ENST00000520601 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
BRF2-202ENST00000520601 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
BRF2-202ENST00000520601 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
BRF2-202ENST00000520601 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
BRF2-202ENST00000520601 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
BRF2-202ENST00000520601 CFTRP13569 1480 aa28.61■■■□□ 2.17
BRF2-202ENST00000520601 WDR62O43379 1518 aa28.6■■■□□ 2.17
BRF2-202ENST00000520601 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
BRF2-202ENST00000520601 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
BRF2-202ENST00000520601 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
BRF2-202ENST00000520601 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
BRF2-202ENST00000520601 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
BRF2-202ENST00000520601 TOPBP1Q92547 1522 aa28.08■■■□□ 2.08
BRF2-202ENST00000520601 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
BRF2-202ENST00000520601 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
BRF2-202ENST00000520601 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
BRF2-202ENST00000520601 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
BRF2-202ENST00000520601 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
BRF2-202ENST00000520601 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
BRF2-202ENST00000520601 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
BRF2-202ENST00000520601 POLA1P09884 1462 aaPredicted RBP27.8■■■□□ 2.04
BRF2-202ENST00000520601 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
BRF2-202ENST00000520601 OSCARQ8IYS5 282 aa27.73■■■□□ 2.03
BRF2-202ENST00000520601 CUX1P39880 1505 aa27.69■■■□□ 2.02
BRF2-202ENST00000520601 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
BRF2-202ENST00000520601 AQRO60306 1485 aaKnown RBP eCLIP27.65■■■□□ 2.026e-9■■■□□ 18
BRF2-202ENST00000520601 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
BRF2-202ENST00000520601 CHD1O14646 1710 aa27.61■■■□□ 2.01
BRF2-202ENST00000520601 SOGA1O94964 1423 aa27.61■■■□□ 2.01
BRF2-202ENST00000520601 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
BRF2-202ENST00000520601 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
BRF2-202ENST00000520601 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
BRF2-202ENST00000520601 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
BRF2-202ENST00000520601 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
BRF2-202ENST00000520601 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
BRF2-202ENST00000520601 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
BRF2-202ENST00000520601 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
BRF2-202ENST00000520601 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
BRF2-202ENST00000520601 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
BRF2-202ENST00000520601 ABCA5Q8WWZ7 1642 aa27.37■■□□□ 1.97
BRF2-202ENST00000520601 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
BRF2-202ENST00000520601 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
BRF2-202ENST00000520601 FBLN2P98095 1184 aa27.35■■□□□ 1.97
BRF2-202ENST00000520601 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
BRF2-202ENST00000520601 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
BRF2-202ENST00000520601 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
BRF2-202ENST00000520601 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
BRF2-202ENST00000520601 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
BRF2-202ENST00000520601 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
BRF2-202ENST00000520601 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
BRF2-202ENST00000520601 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
BRF2-202ENST00000520601 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
BRF2-202ENST00000520601 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
BRF2-202ENST00000520601 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
BRF2-202ENST00000520601 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
BRF2-202ENST00000520601 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
BRF2-202ENST00000520601 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
BRF2-202ENST00000520601 NUP160Q12769 1436 aa26.95■■□□□ 1.9
BRF2-202ENST00000520601 SHROOM2Q13796 1616 aa26.86■■□□□ 1.89
BRF2-202ENST00000520601 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
BRF2-202ENST00000520601 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
BRF2-202ENST00000520601 TRHP20396 242 aaPredicted RBP26.75■■□□□ 1.87
BRF2-202ENST00000520601 CUL7Q14999 1698 aa26.75■■□□□ 1.87
BRF2-202ENST00000520601 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
BRF2-202ENST00000520601 IGF1RP08069 1367 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms