RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
MUC1-228ENST00000620103 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
MUC1-228ENST00000620103 ABCC9O60706 1549 aa33.78■■■■□ 3
MUC1-228ENST00000620103 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
MUC1-228ENST00000620103 NACADO15069 1562 aa32.14■■■□□ 2.74
MUC1-228ENST00000620103 DCAF8L2P0C7V8 631 aa31.91■■■□□ 2.7
MUC1-228ENST00000620103 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
MUC1-228ENST00000620103 ZCCHC6Q5VYS8 1495 aaKnown RBP31.6■■■□□ 2.65
MUC1-228ENST00000620103 DNAJC5BQ9UF47 199 aa31.54■■■□□ 2.64
MUC1-228ENST00000620103 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
MUC1-228ENST00000620103 UNC13AQ9UPW8 1703 aa31.49■■■□□ 2.63
MUC1-228ENST00000620103 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.63
MUC1-228ENST00000620103 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
MUC1-228ENST00000620103 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
MUC1-228ENST00000620103 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
MUC1-228ENST00000620103 EIF4G1Q04637 1599 aaKnown RBP30.55■■■□□ 2.48
MUC1-228ENST00000620103 CC2D2AQ9P2K1 1620 aa30.53■■■□□ 2.48
MUC1-228ENST00000620103 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
MUC1-228ENST00000620103 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
MUC1-228ENST00000620103 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
MUC1-228ENST00000620103 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
MUC1-228ENST00000620103 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
MUC1-228ENST00000620103 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
MUC1-228ENST00000620103 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
MUC1-228ENST00000620103 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
MUC1-228ENST00000620103 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
MUC1-228ENST00000620103 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
MUC1-228ENST00000620103 ERCC6Q03468 1493 aa29.14■■■□□ 2.26
MUC1-228ENST00000620103 NESP48681 1621 aa29.1■■■□□ 2.25
MUC1-228ENST00000620103 CUX2O14529 1486 aa29.07■■■□□ 2.24
MUC1-228ENST00000620103 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.23
MUC1-228ENST00000620103 WIZO95785 1651 aa28.92■■■□□ 2.22
MUC1-228ENST00000620103 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
MUC1-228ENST00000620103 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
MUC1-228ENST00000620103 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
MUC1-228ENST00000620103 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
MUC1-228ENST00000620103 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.2
MUC1-228ENST00000620103 KIF21AQ7Z4S6 1674 aa28.68■■■□□ 2.18
MUC1-228ENST00000620103 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
MUC1-228ENST00000620103 CFTRP13569 1480 aa28.52■■■□□ 2.16
MUC1-228ENST00000620103 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
MUC1-228ENST00000620103 WDR62O43379 1518 aa28.45■■■□□ 2.14
MUC1-228ENST00000620103 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
MUC1-228ENST00000620103 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
MUC1-228ENST00000620103 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
MUC1-228ENST00000620103 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
MUC1-228ENST00000620103 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
MUC1-228ENST00000620103 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
MUC1-228ENST00000620103 ABCC8Q09428 1581 aa27.89■■■□□ 2.06
MUC1-228ENST00000620103 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
MUC1-228ENST00000620103 DNMBPQ6XZF7 1577 aa27.84■■■□□ 2.05
MUC1-228ENST00000620103 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
MUC1-228ENST00000620103 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
MUC1-228ENST00000620103 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
MUC1-228ENST00000620103 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
MUC1-228ENST00000620103 EIF4G3O43432 1585 aaKnown RBP27.63■■■□□ 2.01
MUC1-228ENST00000620103 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
MUC1-228ENST00000620103 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 2
MUC1-228ENST00000620103 TRIM41Q8WV44 630 aa27.53■■■□□ 2
MUC1-228ENST00000620103 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
MUC1-228ENST00000620103 SOGA1O94964 1423 aa27.53■■■□□ 2
MUC1-228ENST00000620103 CUX1P39880 1505 aa27.53■■■□□ 2
MUC1-228ENST00000620103 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
MUC1-228ENST00000620103 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
MUC1-228ENST00000620103 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
MUC1-228ENST00000620103 CHD1O14646 1710 aa27.34■■□□□ 1.97
MUC1-228ENST00000620103 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
MUC1-228ENST00000620103 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
MUC1-228ENST00000620103 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
MUC1-228ENST00000620103 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
MUC1-228ENST00000620103 SNAPC4Q5SXM2 1469 aa27.29■■□□□ 1.96
MUC1-228ENST00000620103 FBLN2P98095 1184 aa27.29■■□□□ 1.96
MUC1-228ENST00000620103 GRIN2BQ13224 1484 aa27.28■■□□□ 1.96
MUC1-228ENST00000620103 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
MUC1-228ENST00000620103 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
MUC1-228ENST00000620103 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.94
MUC1-228ENST00000620103 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
MUC1-228ENST00000620103 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
MUC1-228ENST00000620103 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
MUC1-228ENST00000620103 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
MUC1-228ENST00000620103 ABCA5Q8WWZ7 1642 aa27.14■■□□□ 1.94
MUC1-228ENST00000620103 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
MUC1-228ENST00000620103 CLASP1Q7Z460 1538 aa27.12■■□□□ 1.93
MUC1-228ENST00000620103 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
MUC1-228ENST00000620103 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
MUC1-228ENST00000620103 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
MUC1-228ENST00000620103 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
MUC1-228ENST00000620103 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
MUC1-228ENST00000620103 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
MUC1-228ENST00000620103 ERICH3Q5RHP9 1530 aa26.89■■□□□ 1.9
MUC1-228ENST00000620103 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
MUC1-228ENST00000620103 NUP160Q12769 1436 aa26.85■■□□□ 1.89
MUC1-228ENST00000620103 CEP170Q5SW79 1584 aa26.79■■□□□ 1.88
MUC1-228ENST00000620103 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
MUC1-228ENST00000620103 ERCC6L2Q5T890 1561 aa26.68■■□□□ 1.86
MUC1-228ENST00000620103 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
MUC1-228ENST00000620103 IGF1RP08069 1367 aa26.63■■□□□ 1.85
MUC1-228ENST00000620103 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
MUC1-228ENST00000620103 JPH4Q96JJ6 628 aa26.55■■□□□ 1.84
MUC1-228ENST00000620103 PRG4Q92954 1404 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms