RNA–Protein interactions for RNA: ENST00000405576.5

NR1H3-202, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-202ENST00000405576 NISCHQ9Y2I1 1504 aa40.3■■■■■ 4.04
NR1H3-202ENST00000405576 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
NR1H3-202ENST00000405576 ABCC9O60706 1549 aa34.29■■■■□ 3.08
NR1H3-202ENST00000405576 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
NR1H3-202ENST00000405576 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
NR1H3-202ENST00000405576 DCAF8L2P0C7V8 631 aa33.12■■■□□ 2.89
NR1H3-202ENST00000405576 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
NR1H3-202ENST00000405576 RB1CC1Q8TDY2 1594 aa32.97■■■□□ 2.87
NR1H3-202ENST00000405576 NACADO15069 1562 aa32.93■■■□□ 2.86
NR1H3-202ENST00000405576 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
NR1H3-202ENST00000405576 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
NR1H3-202ENST00000405576 UNC13AQ9UPW8 1703 aa32.11■■■□□ 2.73
NR1H3-202ENST00000405576 PABPN1Q86U42 306 aaKnown RBP eCLIP32.08■■■□□ 2.73
NR1H3-202ENST00000405576 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
NR1H3-202ENST00000405576 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
NR1H3-202ENST00000405576 SUPT5HO00267 1087 aaKnown RBP31.43■■■□□ 2.62
NR1H3-202ENST00000405576 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.59
NR1H3-202ENST00000405576 RSF1Q96T23 1441 aaPredicted RBP31.2■■■□□ 2.58
NR1H3-202ENST00000405576 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
NR1H3-202ENST00000405576 EIF4G1Q04637 1599 aaKnown RBP31.12■■■□□ 2.57
NR1H3-202ENST00000405576 MROH2BQ7Z745 1585 aa31.07■■■□□ 2.56
NR1H3-202ENST00000405576 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
NR1H3-202ENST00000405576 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
NR1H3-202ENST00000405576 WIZO95785 1651 aa30.82■■■□□ 2.52
NR1H3-202ENST00000405576 PEG3Q9GZU2 1588 aa30.67■■■□□ 2.5
NR1H3-202ENST00000405576 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
NR1H3-202ENST00000405576 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
NR1H3-202ENST00000405576 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
NR1H3-202ENST00000405576 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
NR1H3-202ENST00000405576 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
NR1H3-202ENST00000405576 HMGXB3Q12766 1538 aa30.27■■■□□ 2.44
NR1H3-202ENST00000405576 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
NR1H3-202ENST00000405576 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
NR1H3-202ENST00000405576 NESP48681 1621 aa29.64■■■□□ 2.34
NR1H3-202ENST00000405576 TRIM41Q8WV44 630 aa29.64■■■□□ 2.33
NR1H3-202ENST00000405576 ERCC6Q03468 1493 aa29.58■■■□□ 2.33
NR1H3-202ENST00000405576 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
NR1H3-202ENST00000405576 CFTRP13569 1480 aa29.55■■■□□ 2.32
NR1H3-202ENST00000405576 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
NR1H3-202ENST00000405576 ABCC8Q09428 1581 aa29.51■■■□□ 2.31
NR1H3-202ENST00000405576 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
NR1H3-202ENST00000405576 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
NR1H3-202ENST00000405576 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
NR1H3-202ENST00000405576 CUX2O14529 1486 aa29.31■■■□□ 2.28
NR1H3-202ENST00000405576 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
NR1H3-202ENST00000405576 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
NR1H3-202ENST00000405576 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
NR1H3-202ENST00000405576 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
NR1H3-202ENST00000405576 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
NR1H3-202ENST00000405576 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
NR1H3-202ENST00000405576 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
NR1H3-202ENST00000405576 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
NR1H3-202ENST00000405576 CUX1P39880 1505 aa29.08■■■□□ 2.25
NR1H3-202ENST00000405576 EEA1Q15075 1411 aa29.06■■■□□ 2.24
NR1H3-202ENST00000405576 WDR62O43379 1518 aa28.98■■■□□ 2.23
NR1H3-202ENST00000405576 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
NR1H3-202ENST00000405576 SOGA1O94964 1423 aa28.93■■■□□ 2.22
NR1H3-202ENST00000405576 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
NR1H3-202ENST00000405576 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
NR1H3-202ENST00000405576 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
NR1H3-202ENST00000405576 TOPBP1Q92547 1522 aa28.81■■■□□ 2.2
NR1H3-202ENST00000405576 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
NR1H3-202ENST00000405576 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
NR1H3-202ENST00000405576 CSRNP3Q8WYN3 585 aa28.77■■■□□ 2.2
NR1H3-202ENST00000405576 KIF27Q86VH2 1401 aa28.7■■■□□ 2.18
NR1H3-202ENST00000405576 KIF21BO75037 1637 aa28.65■■■□□ 2.18
NR1H3-202ENST00000405576 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
NR1H3-202ENST00000405576 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
NR1H3-202ENST00000405576 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
NR1H3-202ENST00000405576 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
NR1H3-202ENST00000405576 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
NR1H3-202ENST00000405576 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
NR1H3-202ENST00000405576 EHMT2Q96KQ7 1210 aa28.5■■■□□ 2.15
NR1H3-202ENST00000405576 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
NR1H3-202ENST00000405576 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
NR1H3-202ENST00000405576 TNIKQ9UKE5 1360 aa28.48■■■□□ 2.15
NR1H3-202ENST00000405576 PRXQ9BXM0 1461 aa28.46■■■□□ 2.15
NR1H3-202ENST00000405576 TARBP1Q13395 1621 aaKnown RBP28.39■■■□□ 2.14
NR1H3-202ENST00000405576 RAPGEF2Q9Y4G8 1499 aa28.38■■■□□ 2.13
NR1H3-202ENST00000405576 UBTFP17480 764 aaKnown RBP28.37■■■□□ 2.13
NR1H3-202ENST00000405576 ZNF608Q9ULD9 1512 aaPredicted RBP28.37■■■□□ 2.13
NR1H3-202ENST00000405576 IGF1RP08069 1367 aa28.37■■■□□ 2.13
NR1H3-202ENST00000405576 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
NR1H3-202ENST00000405576 CUL7Q14999 1698 aa28.3■■■□□ 2.12
NR1H3-202ENST00000405576 CEP162Q5TB80 1403 aa28.29■■■□□ 2.12
NR1H3-202ENST00000405576 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
NR1H3-202ENST00000405576 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
NR1H3-202ENST00000405576 AQRO60306 1485 aaKnown RBP eCLIP28.24■■■□□ 2.119e-8■■■■□ 21.2
NR1H3-202ENST00000405576 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
NR1H3-202ENST00000405576 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
NR1H3-202ENST00000405576 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
NR1H3-202ENST00000405576 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
NR1H3-202ENST00000405576 CLIP1P30622 1438 aa28.09■■■□□ 2.09
NR1H3-202ENST00000405576 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
NR1H3-202ENST00000405576 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
NR1H3-202ENST00000405576 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
NR1H3-202ENST00000405576 FBLN2P98095 1184 aa27.96■■■□□ 2.07
NR1H3-202ENST00000405576 CTTNBP2Q8WZ74 1663 aa27.95■■■□□ 2.07
NR1H3-202ENST00000405576 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.06
NR1H3-202ENST00000405576 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms